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The map label for this gene is rmuC [H]

Identifier: 197116740

GI number: 197116740

Start: 415878

End: 417194

Strand: Reverse

Name: rmuC [H]

Synonym: Gbem_0340

Alternate gene names: 197116740

Gene position: 417194-415878 (Counterclockwise)

Preceding gene: 197116741

Following gene: 197116739

Centisome position: 9.04

GC content: 62.19

Gene sequence:

>1317_bases
ATGACACCTGACCTCTTTCAATTGATCATCCTGCTGCTTGGCGCCGCCACCTTCGTGTTCGCGTTCCTTTGCTACCTGCA
TCTCAAACGGGCGCACATCGCCGAAGCGCGCTTCGACCAACTGGAAAAGGGGTTGGAGCGGCTGGAACGCACCCTGCAAG
CAGAACTCGGGAGAAACCGCGAGGAGCTGGGGGGGAACCTCAGGCAATTCGGGGAGGCGGTGCAAAAGCGGATGGTGGAT
ATCGCCTCGCTGCAAAAGGGACAGCTTGAAGGATTCACTCAGCAGCTTGGCAGCCTCACCGCCAGCAACGAGCAGCGCCT
GGACAAGCTGCGCGAAACGGTAGAGCTGCGCCTCAAGTGGCTGCAGGACGACAACTCGAAGAAGCTGGAGCAGATGCGCG
CCACGGTTGACGAAAAGCTGCACGAGACCCTGGAAAAGCGGCTGGGGGAGTCGTTCAAGCAGGTAAGCGGCCAGCTGGAG
CAGGTCCACAAGGGGCTGGGGGAGATGCAGTCGCTTGCCTCCGGGGTCGGCGACCTGAAGAAGGTCCTCTCCAACATCAA
GACCCGCGGCACGCTCGGCGAGGTGCAACTGCACAACCTTTTGGAGCAGATACTCACCCCGGACCAGTACGGCGCCAACG
TCGCCACGAAGCCCGGGAGCGACGCGCGGGTCGAGTTCGCCATACGCCTTCCCGGCAAGGACGACAAGCCGCTCTGGCTC
CCGGTCGACGCCAAGTTCCCGCAGGAGGACTACCTGCGGCTGGTCGAGGCCCAGGAGCAGGGAAACCAGGCCGCGGTACA
GGAGGCGACCAGGCAGTTCGACAAGACCGTCGCCGCCATGGCGAAGCTCATCTGCGAGAAGTACTTAGCCCCTCCCGACA
CCACCGATTTCGCCGTCATGTTCCTGGCCAACGAGGCAAGCTACGCCCAGGTGTTAAGCCGCCCCGGGCTCTTCGACGCC
ATCTTGCGCGAGCACAAGGTCATCGTCGCAGGCCCCACCACCATCGCCGCCCTCCTTTCGTCGCTCAGCCTCGGCTTCAA
GACGCTCACCATCGAGAAAAGGAGCAGCGACGTCTGGCGGTTATTGGGCGCGATAAAGACCGAGTTCATGACCTTCGGGA
CGTTGCTGGAAAAAACCAGGAAGAAGCTCGACGAGGCCTCCTCCAGCATCGACACCGCCGCGACCCGCACCCGCCGCATC
CAGCGCAAGATGCAAGGGATCGAGCAGTTGCCGGAGCATGAAGCGAAGGGATTGTTGGGAGGGGAGTTTGGCGCCGCGGA
GCCGGAGAGCGAAGTTATTCTGATCGATGAAGCGTAA

Upstream 100 bases:

>100_bases
TCGAAAAGGCGGGGCACATGGTTAACATGGAACAACCAGAACTCTTCAACAAGACGCTGGTCGACTTCCTCGATTCGCTT
CCTGATTAGCGGGATTAAAC

Downstream 100 bases:

>100_bases
CGATCTTCCGAGACACTGGTTCATCAGACGCAAATCCCCCCTGTCCCCTCTTCGCAAAGGTTCATCGGGAAATTCCGGGG
ATAACAGTCCCCCCCTCCCT

Product: DNA recombination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MTPDLFQLIILLLGAATFVFAFLCYLHLKRAHIAEARFDQLEKGLERLERTLQAELGRNREELGGNLRQFGEAVQKRMVD
IASLQKGQLEGFTQQLGSLTASNEQRLDKLRETVELRLKWLQDDNSKKLEQMRATVDEKLHETLEKRLGESFKQVSGQLE
QVHKGLGEMQSLASGVGDLKKVLSNIKTRGTLGEVQLHNLLEQILTPDQYGANVATKPGSDARVEFAIRLPGKDDKPLWL
PVDAKFPQEDYLRLVEAQEQGNQAAVQEATRQFDKTVAAMAKLICEKYLAPPDTTDFAVMFLANEASYAQVLSRPGLFDA
ILREHKVIVAGPTTIAALLSSLSLGFKTLTIEKRSSDVWRLLGAIKTEFMTFGTLLEKTRKKLDEASSSIDTAATRTRRI
QRKMQGIEQLPEHEAKGLLGGEFGAAEPESEVILIDEA

Sequences:

>Translated_438_residues
MTPDLFQLIILLLGAATFVFAFLCYLHLKRAHIAEARFDQLEKGLERLERTLQAELGRNREELGGNLRQFGEAVQKRMVD
IASLQKGQLEGFTQQLGSLTASNEQRLDKLRETVELRLKWLQDDNSKKLEQMRATVDEKLHETLEKRLGESFKQVSGQLE
QVHKGLGEMQSLASGVGDLKKVLSNIKTRGTLGEVQLHNLLEQILTPDQYGANVATKPGSDARVEFAIRLPGKDDKPLWL
PVDAKFPQEDYLRLVEAQEQGNQAAVQEATRQFDKTVAAMAKLICEKYLAPPDTTDFAVMFLANEASYAQVLSRPGLFDA
ILREHKVIVAGPTTIAALLSSLSLGFKTLTIEKRSSDVWRLLGAIKTEFMTFGTLLEKTRKKLDEASSSIDTAATRTRRI
QRKMQGIEQLPEHEAKGLLGGEFGAAEPESEVILIDEA
>Mature_437_residues
TPDLFQLIILLLGAATFVFAFLCYLHLKRAHIAEARFDQLEKGLERLERTLQAELGRNREELGGNLRQFGEAVQKRMVDI
ASLQKGQLEGFTQQLGSLTASNEQRLDKLRETVELRLKWLQDDNSKKLEQMRATVDEKLHETLEKRLGESFKQVSGQLEQ
VHKGLGEMQSLASGVGDLKKVLSNIKTRGTLGEVQLHNLLEQILTPDQYGANVATKPGSDARVEFAIRLPGKDDKPLWLP
VDAKFPQEDYLRLVEAQEQGNQAAVQEATRQFDKTVAAMAKLICEKYLAPPDTTDFAVMFLANEASYAQVLSRPGLFDAI
LREHKVIVAGPTTIAALLSSLSLGFKTLTIEKRSSDVWRLLGAIKTEFMTFGTLLEKTRKKLDEASSSIDTAATRTRRIQ
RKMQGIEQLPEHEAKGLLGGEFGAAEPESEVILIDEA

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 48868; Mature: 48737

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDLFQLIILLLGAATFVFAFLCYLHLKRAHIAEARFDQLEKGLERLERTLQAELGRNR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EELGGNLRQFGEAVQKRMVDIASLQKGQLEGFTQQLGSLTASNEQRLDKLRETVELRLKW
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LQDDNSKKLEQMRATVDEKLHETLEKRLGESFKQVSGQLEQVHKGLGEMQSLASGVGDLK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVLSNIKTRGTLGEVQLHNLLEQILTPDQYGANVATKPGSDARVEFAIRLPGKDDKPLWL
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEE
PVDAKFPQEDYLRLVEAQEQGNQAAVQEATRQFDKTVAAMAKLICEKYLAPPDTTDFAVM
ECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
FLANEASYAQVLSRPGLFDAILREHKVIVAGPTTIAALLSSLSLGFKTLTIEKRSSDVWR
EEECCHHHHHHHHCCCHHHHHHHHCCEEEECHHHHHHHHHHHHCCHHEEEEECCCHHHHH
LLGAIKTEFMTFGTLLEKTRKKLDEASSSIDTAATRTRRIQRKMQGIEQLPEHEAKGLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
GEFGAAEPESEVILIDEA
CCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
TPDLFQLIILLLGAATFVFAFLCYLHLKRAHIAEARFDQLEKGLERLERTLQAELGRNR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EELGGNLRQFGEAVQKRMVDIASLQKGQLEGFTQQLGSLTASNEQRLDKLRETVELRLKW
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LQDDNSKKLEQMRATVDEKLHETLEKRLGESFKQVSGQLEQVHKGLGEMQSLASGVGDLK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVLSNIKTRGTLGEVQLHNLLEQILTPDQYGANVATKPGSDARVEFAIRLPGKDDKPLWL
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEE
PVDAKFPQEDYLRLVEAQEQGNQAAVQEATRQFDKTVAAMAKLICEKYLAPPDTTDFAVM
ECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
FLANEASYAQVLSRPGLFDAILREHKVIVAGPTTIAALLSSLSLGFKTLTIEKRSSDVWR
EEECCHHHHHHHHCCCHHHHHHHHCCEEEECHHHHHHHHHHHHCCHHEEEEECCCHHHHH
LLGAIKTEFMTFGTLLEKTRKKLDEASSSIDTAATRTRRIQRKMQGIEQLPEHEAKGLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
GEFGAAEPESEVILIDEA
CCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]