Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116728

Identifier: 197116728

GI number: 197116728

Start: 399701

End: 400852

Strand: Direct

Name: 197116728

Synonym: Gbem_0328

Alternate gene names: NA

Gene position: 399701-400852 (Clockwise)

Preceding gene: 197116727

Following gene: 308535157

Centisome position: 8.66

GC content: 42.88

Gene sequence:

>1152_bases
ATGTCTGTTTTAAGCCTTAAACGACTTGATCGTATAAACTGGGACTTTCCTAGTGCTGGAACTGAGTTAGGGTCCGTTCA
TTCTATCCATTGGTTCCCAGGAAACTACATTCCACAAATTCCAGCTGCACTTATTCAAGTTCTATCTAGAACTGGCGAAG
TAGTGTTTGATCCATTTGGGGGAAGTGGAACAACTGCAATTGAAGCTTTAAAGCTTGGCAGATTCGCTGTGGTCTCTGAC
CGTATTTCAGCATGTGTACAAATTACAGAAGCCAAGTTATCTTTGCTTGGCAACCCACTTGATCGTGATGTTTGCAACAA
GATATTTTCTTCGTTGACCTTTGAACACCTTTGCCAAAGCACCCAAATAGGTGTCAATGGAGAGGGGAGAGCTGAGGATC
TAGAGTGTTGGTACTCCTCTGAGACACTGGGCCAACTTCGCTATATTTGGAAAATAATAGAACTTCAATCATCACAAGTG
CAGAAAGTCCTTTTTGCGTTATTTTCAAATGTACTTTTTGCCTGTGCTTCGACCAATGGATCTCGCACACATACTGGGAA
GCTGAGGCGACATCACTGGGGTTGGGTGGCTGATAATGTGCGCCCCAAAGAGTTGATTTTCCATAATGCGATAGAATTGT
TTTGTAAGAATCTTCGTGCTGTTATGGATACAAACAGAGGTCCGATTTCAACTACCGCTAAAGTTATTCAACAAGATGCC
CGTAACATGGAGTTAGAAGACGAATCTGTCGATCTTGTAGTCACTTCTCCTCCCTATGCTGGTGTTATTGATTATACTCA
TGCTAACCGACTACTTTATCTTTGGATGGGATGGCCAATGGGGGAAGAACGTGCCGATGAAATCGGTGCTAGGTATAGAC
GGAATAGAAAAAATGCTGTGGAGGAATATTTATCTGATATGCGGTTATGTCGAGACCAAATACACAGGGTTCTCAAAAAA
GGGTCTTATTGCGCAATTGTGGTTGGTGAATCTAAAAAGTTTCCAAACACTGCAAGTCTCCTTATTGAGGACTTTTCACA
GTCCATGCCTATAGTTTGGGGGCCAAAATCGCGCTACTTATCGCGTCGTAGGGTTTCTGATAGGGTTGCTGGAGATCCCG
TTGAATTCGTTTGCGTCTTTCAAAAGCTATGA

Upstream 100 bases:

>100_bases
CCGATGAGCTAGAACAAATCTTCCAACTTTCAGAGTCGTATTTCTCAACAACGATTATTGGCCTGGCCGCAAACAATAAT
AGCCACAATGATATACAAGA

Downstream 100 bases:

>100_bases
TTATTTCTTTTTTTGGATCATCATGCACAGGAAAATCGACTCTCGCCAGGCCGTTAGCTAAGTACCTTGGATTACCTCTG
AGATCATGCGGCGAGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Adenine-Specific DNA Methylase; Methylase; Type II R/M System; Methyltransferase Cytosine; RNA Methylase

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSVLSLKRLDRINWDFPSAGTELGSVHSIHWFPGNYIPQIPAALIQVLSRTGEVVFDPFGGSGTTAIEALKLGRFAVVSD
RISACVQITEAKLSLLGNPLDRDVCNKIFSSLTFEHLCQSTQIGVNGEGRAEDLECWYSSETLGQLRYIWKIIELQSSQV
QKVLFALFSNVLFACASTNGSRTHTGKLRRHHWGWVADNVRPKELIFHNAIELFCKNLRAVMDTNRGPISTTAKVIQQDA
RNMELEDESVDLVVTSPPYAGVIDYTHANRLLYLWMGWPMGEERADEIGARYRRNRKNAVEEYLSDMRLCRDQIHRVLKK
GSYCAIVVGESKKFPNTASLLIEDFSQSMPIVWGPKSRYLSRRRVSDRVAGDPVEFVCVFQKL

Sequences:

>Translated_383_residues
MSVLSLKRLDRINWDFPSAGTELGSVHSIHWFPGNYIPQIPAALIQVLSRTGEVVFDPFGGSGTTAIEALKLGRFAVVSD
RISACVQITEAKLSLLGNPLDRDVCNKIFSSLTFEHLCQSTQIGVNGEGRAEDLECWYSSETLGQLRYIWKIIELQSSQV
QKVLFALFSNVLFACASTNGSRTHTGKLRRHHWGWVADNVRPKELIFHNAIELFCKNLRAVMDTNRGPISTTAKVIQQDA
RNMELEDESVDLVVTSPPYAGVIDYTHANRLLYLWMGWPMGEERADEIGARYRRNRKNAVEEYLSDMRLCRDQIHRVLKK
GSYCAIVVGESKKFPNTASLLIEDFSQSMPIVWGPKSRYLSRRRVSDRVAGDPVEFVCVFQKL
>Mature_382_residues
SVLSLKRLDRINWDFPSAGTELGSVHSIHWFPGNYIPQIPAALIQVLSRTGEVVFDPFGGSGTTAIEALKLGRFAVVSDR
ISACVQITEAKLSLLGNPLDRDVCNKIFSSLTFEHLCQSTQIGVNGEGRAEDLECWYSSETLGQLRYIWKIIELQSSQVQ
KVLFALFSNVLFACASTNGSRTHTGKLRRHHWGWVADNVRPKELIFHNAIELFCKNLRAVMDTNRGPISTTAKVIQQDAR
NMELEDESVDLVVTSPPYAGVIDYTHANRLLYLWMGWPMGEERADEIGARYRRNRKNAVEEYLSDMRLCRDQIHRVLKKG
SYCAIVVGESKKFPNTASLLIEDFSQSMPIVWGPKSRYLSRRRVSDRVAGDPVEFVCVFQKL

Specific function: Unknown

COG id: COG0863

COG function: function code L; DNA modification methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43274; Mature: 43143

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS00093 N4_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLSLKRLDRINWDFPSAGTELGSVHSIHWFPGNYIPQIPAALIQVLSRTGEVVFDPFG
CCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCC
GSGTTAIEALKLGRFAVVSDRISACVQITEAKLSLLGNPLDRDVCNKIFSSLTFEHLCQS
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
TQIGVNGEGRAEDLECWYSSETLGQLRYIWKIIELQSSQVQKVLFALFSNVLFACASTNG
CCCCCCCCCCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SRTHTGKLRRHHWGWVADNVRPKELIFHNAIELFCKNLRAVMDTNRGPISTTAKVIQQDA
CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RNMELEDESVDLVVTSPPYAGVIDYTHANRLLYLWMGWPMGEERADEIGARYRRNRKNAV
HCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EEYLSDMRLCRDQIHRVLKKGSYCAIVVGESKKFPNTASLLIEDFSQSMPIVWGPKSRYL
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEECCHHHHH
SRRRVSDRVAGDPVEFVCVFQKL
HHHHHHHHHCCCCHHHHEEECCC
>Mature Secondary Structure 
SVLSLKRLDRINWDFPSAGTELGSVHSIHWFPGNYIPQIPAALIQVLSRTGEVVFDPFG
CCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCC
GSGTTAIEALKLGRFAVVSDRISACVQITEAKLSLLGNPLDRDVCNKIFSSLTFEHLCQS
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
TQIGVNGEGRAEDLECWYSSETLGQLRYIWKIIELQSSQVQKVLFALFSNVLFACASTNG
CCCCCCCCCCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SRTHTGKLRRHHWGWVADNVRPKELIFHNAIELFCKNLRAVMDTNRGPISTTAKVIQQDA
CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RNMELEDESVDLVVTSPPYAGVIDYTHANRLLYLWMGWPMGEERADEIGARYRRNRKNAV
HCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EEYLSDMRLCRDQIHRVLKKGSYCAIVVGESKKFPNTASLLIEDFSQSMPIVWGPKSRYL
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEECCHHHHH
SRRRVSDRVAGDPVEFVCVFQKL
HHHHHHHHHCCCCHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA