| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116703
Identifier: 197116703
GI number: 197116703
Start: 375669
End: 376673
Strand: Reverse
Name: 197116703
Synonym: Gbem_0303
Alternate gene names: NA
Gene position: 376673-375669 (Counterclockwise)
Preceding gene: 197116712
Following gene: 197116702
Centisome position: 8.16
GC content: 63.18
Gene sequence:
>1005_bases ATGCCGAACGACACGAGAAAGAACATCATCGACATCCACTGCCACACGGCGGGGATCGGGGCGGGAGAGAGCGGCTGCTT CGTGTCGCCTGCCTTGATGGGAAGTTGGAAGTACTGGGTCTACCTCCGCGCCTTTGGCGTTACGGAGCAGGAACTGAAGC GGGAGGGGGACGGCCTGGTGATGCGCCGGACTTCGGAGCGCCTGGCGCAATCGGAGCGGGTGGCATCCGCGGTCATCCTC GCCATGGACGGCGTGGTAGACGCAAACGGGAACCTCGACAGGTCGCGCACGGAAATGTTCATCCCCAACGAGTTCGTGGC GAAGGAAACGGCCAAGTACCCGAACCTCCTCTTCGGCGCCAGCATCAACCCGTTCCGCCCTGACGCCATCGAACGGCTGG AGCGGGCCGCGGAATCTGGTGCGGTGCTGCTGAAGTGGCTTCCCGCCATCCAGCACATCGACCCTGCGGACGAAAGGCTG ATCCCGTTCTACCTGAAGCTGAAACAACTGGGACTGCCGCTCCTCACCCACACGGGGAAGGAAAGCTCTTTCACCAGCGC GAAGGAAGAACTGGGGGACCCGGAGCGCCTGAGGCTGCCGCTTTTCTTAGGCGTCACGGTGATCGCCGCACATGCCGCGA GCAGCGGGAAAAGCCAGGGGGAGGATAACCATGACCGCTTCCTGCGCTTGTGCCGGGAATTCCCCAACCTCTATGCGGAC ATCTCGGCGCTTACCCAGATAAACCGCCTGGGTCACCTGCAACGTCTCCTCAAGCAGACCGAGCTGCACGGCCGCCTCTT GTACGGAACGGACATGCCGCTTTTGAGGACGCCGCTGGTCACCCCTTTCGCCTACTCCCACGTGCTGCCGCTTCGGCGCA TGGTGGAGATTGCCCGCATTGCCAACGTGTGGGACCGGGACGTGGCGCTGAAAGAGGCGCTGGGGGTGCCGGAGCTGGTC TTCAACAACGTGCAGTGGATGAAGGACACGCCCCCCCTCCCTTGA
Upstream 100 bases:
>100_bases CCTGTCCCCCTTGCGTTCCACTTGGTTACGAAGCTGGAGCTTCGGTCTGCATTGCGTTCCCAAGGTGGACCTTGGGAACG AGATTAAAAAGGCGGCCCAA
Downstream 100 bases:
>100_bases CGGGAGGGGGACGGGGGGTGGGTGAAGTTGCCAGCAGCGTAAAGGGTGGCACCTACCCCCACCCCCTAACCCCCTCCCGC AAGGGGAGGGGGGACTAGGT
Product: metal-dependent hydrolase superfamily protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase Superfamily Protein; Amidohydrolase
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MPNDTRKNIIDIHCHTAGIGAGESGCFVSPALMGSWKYWVYLRAFGVTEQELKREGDGLVMRRTSERLAQSERVASAVIL AMDGVVDANGNLDRSRTEMFIPNEFVAKETAKYPNLLFGASINPFRPDAIERLERAAESGAVLLKWLPAIQHIDPADERL IPFYLKLKQLGLPLLTHTGKESSFTSAKEELGDPERLRLPLFLGVTVIAAHAASSGKSQGEDNHDRFLRLCREFPNLYAD ISALTQINRLGHLQRLLKQTELHGRLLYGTDMPLLRTPLVTPFAYSHVLPLRRMVEIARIANVWDRDVALKEALGVPELV FNNVQWMKDTPPLP
Sequences:
>Translated_334_residues MPNDTRKNIIDIHCHTAGIGAGESGCFVSPALMGSWKYWVYLRAFGVTEQELKREGDGLVMRRTSERLAQSERVASAVIL AMDGVVDANGNLDRSRTEMFIPNEFVAKETAKYPNLLFGASINPFRPDAIERLERAAESGAVLLKWLPAIQHIDPADERL IPFYLKLKQLGLPLLTHTGKESSFTSAKEELGDPERLRLPLFLGVTVIAAHAASSGKSQGEDNHDRFLRLCREFPNLYAD ISALTQINRLGHLQRLLKQTELHGRLLYGTDMPLLRTPLVTPFAYSHVLPLRRMVEIARIANVWDRDVALKEALGVPELV FNNVQWMKDTPPLP >Mature_333_residues PNDTRKNIIDIHCHTAGIGAGESGCFVSPALMGSWKYWVYLRAFGVTEQELKREGDGLVMRRTSERLAQSERVASAVILA MDGVVDANGNLDRSRTEMFIPNEFVAKETAKYPNLLFGASINPFRPDAIERLERAAESGAVLLKWLPAIQHIDPADERLI PFYLKLKQLGLPLLTHTGKESSFTSAKEELGDPERLRLPLFLGVTVIAAHAASSGKSQGEDNHDRFLRLCREFPNLYADI SALTQINRLGHLQRLLKQTELHGRLLYGTDMPLLRTPLVTPFAYSHVLPLRRMVEIARIANVWDRDVALKEALGVPELVF NNVQWMKDTPPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37427; Mature: 37295
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNDTRKNIIDIHCHTAGIGAGESGCFVSPALMGSWKYWVYLRAFGVTEQELKREGDGLV CCCCCCCCEEEEEEEECCCCCCCCCCEECHHHHCCCEEEEEEEECCCCHHHHHHCCCCEE MRRTSERLAQSERVASAVILAMDGVVDANGNLDRSRTEMFIPNEFVAKETAKYPNLLFGA EEHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEECCCHHHHHHHHCCCCEEECC SINPFRPDAIERLERAAESGAVLLKWLPAIQHIDPADERLIPFYLKLKQLGLPLLTHTGK CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHEECCCC ESSFTSAKEELGDPERLRLPLFLGVTVIAAHAASSGKSQGEDNHDRFLRLCREFPNLYAD CCHHHHHHHHCCCHHHEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH ISALTQINRLGHLQRLLKQTELHGRLLYGTDMPLLRTPLVTPFAYSHVLPLRRMVEIARI HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHH ANVWDRDVALKEALGVPELVFNNVQWMKDTPPLP HHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PNDTRKNIIDIHCHTAGIGAGESGCFVSPALMGSWKYWVYLRAFGVTEQELKREGDGLV CCCCCCCEEEEEEEECCCCCCCCCCEECHHHHCCCEEEEEEEECCCCHHHHHHCCCCEE MRRTSERLAQSERVASAVILAMDGVVDANGNLDRSRTEMFIPNEFVAKETAKYPNLLFGA EEHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEECCCHHHHHHHHCCCCEEECC SINPFRPDAIERLERAAESGAVLLKWLPAIQHIDPADERLIPFYLKLKQLGLPLLTHTGK CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHEECCCC ESSFTSAKEELGDPERLRLPLFLGVTVIAAHAASSGKSQGEDNHDRFLRLCREFPNLYAD CCHHHHHHHHCCCHHHEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH ISALTQINRLGHLQRLLKQTELHGRLLYGTDMPLLRTPLVTPFAYSHVLPLRRMVEIARI HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHH ANVWDRDVALKEALGVPELVFNNVQWMKDTPPLP HHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA