Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116710

Identifier: 197116710

GI number: 197116710

Start: 383494

End: 384210

Strand: Direct

Name: 197116710

Synonym: Gbem_0310

Alternate gene names: NA

Gene position: 383494-384210 (Clockwise)

Preceding gene: 197116709

Following gene: 197116711

Centisome position: 8.31

GC content: 56.07

Gene sequence:

>717_bases
ATGAATCGCGAACAGCATGTTTGCCTGGTGTGCGGCTTCAACATGATCGGGTTTCATCCCGCTAATTGCCCTTTCTGCGG
TGCCTCGGCAATGCACTTCATAACCTCGGAAGAGTGCTCCGCGCGCTTCCATGTCTCCTCGACTCAGGTAAACGAAAAGG
TGTCGAGGTTAAATTCCCAACCTGCCCTCGGCATCGAGCATGCCGCCTACCGGATCGAGACCGGCAACGGTGCATGCTGG
ATCGACTGCCCGTCCTGTTTCGACTCTTCGCTTCCCAAGGCAGACTCCATCCTCTTCACCCATCACCACTTCCTCGGCGC
TTCCAATCTCTACCGCGATCGCTTCGCGGCTGAGGTGCGCATCCACCAACTTGACTCCACCCACGACATCTGCCGCCCCT
TCAGTTTCGACACCACCTTCCAAGAGAACTTCGTCCACAAAGGTATAGAAGCCTTCCATATAGGCGGACATACACCCGGA
TTCACCTGCTACATCTTCGAAGACGTCTTCTTCATCTGCGACTACGTCTTTCTCGATGGCGACGGCGTGAAATACAACCC
GTTCGGTCCAGCCGATCTCACCATCGCAGGGGGAAGAGTAATTGAAGACGTTATCCGCAACCGTCAGCTCTCCACGGTCT
GCGGCTACAACTACGTCATCGGCTACGACGACTGGAAGCGCAGGTTCGACGCCGGCCCCGTCTTTGGCGGATATTGA

Upstream 100 bases:

>100_bases
GCAATTGAAGCTTTACCCCGGCGACACATAGCCCGGTTGCCCTTTGCATTCCCGGTGCGATAATCAGCCCTGTTGCTTTT
TCCCTGTAACGGAGGCCTCT

Downstream 100 bases:

>100_bases
ACCTACTGATGATGAACGGCGCGTACAGCGTAAAGAGGCGCTGCAAATTCTTACTGGAGCATCAGCATTAAACACTTTGA
CTTGAGTGCCAGAAATGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNREQHVCLVCGFNMIGFHPANCPFCGASAMHFITSEECSARFHVSSTQVNEKVSRLNSQPALGIEHAAYRIETGNGACW
IDCPSCFDSSLPKADSILFTHHHFLGASNLYRDRFAAEVRIHQLDSTHDICRPFSFDTTFQENFVHKGIEAFHIGGHTPG
FTCYIFEDVFFICDYVFLDGDGVKYNPFGPADLTIAGGRVIEDVIRNRQLSTVCGYNYVIGYDDWKRRFDAGPVFGGY

Sequences:

>Translated_238_residues
MNREQHVCLVCGFNMIGFHPANCPFCGASAMHFITSEECSARFHVSSTQVNEKVSRLNSQPALGIEHAAYRIETGNGACW
IDCPSCFDSSLPKADSILFTHHHFLGASNLYRDRFAAEVRIHQLDSTHDICRPFSFDTTFQENFVHKGIEAFHIGGHTPG
FTCYIFEDVFFICDYVFLDGDGVKYNPFGPADLTIAGGRVIEDVIRNRQLSTVCGYNYVIGYDDWKRRFDAGPVFGGY
>Mature_238_residues
MNREQHVCLVCGFNMIGFHPANCPFCGASAMHFITSEECSARFHVSSTQVNEKVSRLNSQPALGIEHAAYRIETGNGACW
IDCPSCFDSSLPKADSILFTHHHFLGASNLYRDRFAAEVRIHQLDSTHDICRPFSFDTTFQENFVHKGIEAFHIGGHTPG
FTCYIFEDVFFICDYVFLDGDGVKYNPFGPADLTIAGGRVIEDVIRNRQLSTVCGYNYVIGYDDWKRRFDAGPVFGGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26735; Mature: 26735

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNREQHVCLVCGFNMIGFHPANCPFCGASAMHFITSEECSARFHVSSTQVNEKVSRLNSQ
CCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEECHHHHHHHHHHHCCC
PALGIEHAAYRIETGNGACWIDCPSCFDSSLPKADSILFTHHHFLGASNLYRDRFAAEVR
CCCCCCEEEEEEECCCCEEEEECHHHHCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHEEE
IHQLDSTHDICRPFSFDTTFQENFVHKGIEAFHIGGHTPGFTCYIFEDVFFICDYVFLDG
EEECCCCHHHHCCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEEHHHHHHHHHEEEEECC
DGVKYNPFGPADLTIAGGRVIEDVIRNRQLSTVCGYNYVIGYDDWKRRFDAGPVFGGY
CCEEECCCCCCCEEEECCHHHHHHHHCCCEEEECCCEEEEECHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNREQHVCLVCGFNMIGFHPANCPFCGASAMHFITSEECSARFHVSSTQVNEKVSRLNSQ
CCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEECHHHHHHHHHHHCCC
PALGIEHAAYRIETGNGACWIDCPSCFDSSLPKADSILFTHHHFLGASNLYRDRFAAEVR
CCCCCCEEEEEEECCCCEEEEECHHHHCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHEEE
IHQLDSTHDICRPFSFDTTFQENFVHKGIEAFHIGGHTPGFTCYIFEDVFFICDYVFLDG
EEECCCCHHHHCCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEEHHHHHHHHHEEEEECC
DGVKYNPFGPADLTIAGGRVIEDVIRNRQLSTVCGYNYVIGYDDWKRRFDAGPVFGGY
CCEEECCCCCCCEEEECCHHHHHHHHCCCEEEECCCEEEEECHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA