Click here to switch to the map view.

The map label for this gene is 197116709

Identifier: 197116709

GI number: 197116709

Start: 382719

End: 383318

Strand: Direct

Name: 197116709

Synonym: Gbem_0309

Alternate gene names: NA

Gene position: 382719-383318 (Clockwise)

Preceding gene: 197116708

Following gene: 197116710

Centisome position: 8.29

GC content: 55.33

Gene sequence:

>600_bases
ATGAAAAAAATTATAGTTCTTGCAGTTTTGTTGGCTTTGGTTTCCCTCGTTCCCGGCGCTGCAATGGCGGACAGCATCAA
GGGGAGGTTGGGCGTGACTGGTAAGGTCGGGTTTATCGTCCCGTCCGACAACGAAGCTGAATTCGGCTTCGGAACGAACC
ACACCGACACCGGTTTAGTCGTGGGCGGCGGTCTTCTTTACGGCATCGACGATCACTTCGCCGCCGAGTTGGATGTGACC
AACTCTTCCTTCGATTCGGAAATCGGCGACTTCGACGTCACCGATATCTCCTTCGGCGGCCAGTACCGTTTCACCAACAT
GCGTGACAGAAGGCTCGTTCCCTACATTGGAGCGGGCTTGGACATCATCTCTTCTGACTTCGATTCGGATTTCGGGGGAA
GGCGCCATGTCGACACGACGCTGGGTGTGCATCTGAGCGGAGGTCTCGATTATTTCGTTGAGAAGCACGTCGCTCTGACC
GCCGAAGCAAAGGTCGTGCTGGCGCCGGACGCAGACATCACTGACGACGGCTTCCACAGCGGTTCCTTCGATCCGACCAA
CTTCTCCACCACCTTCGGAGTCCGGTTCTTTTTCAACTAA

Upstream 100 bases:

>100_bases
ATCTTTTTCGATATTAAAGGTGGCCCGGCCTTTTTTTGTTCCATGCCTCAGGCCACAGGTTGTTTCTGTGCGCTCTGAGC
TAATCAAAGGAGGAAGTACG

Downstream 100 bases:

>100_bases
CAAGGGACTCTCCAAGCTCCCCCTCCCTTGACGGGAGGGGGGACTGTCGGGCAGAACCGGCCGATCAACATCCATGCAAT
TGAAGCTTTACCCCGGCGAC

Product: outer membrane protein

Products: NA

Alternate protein names: OmpW Family Protein

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKKIIVLAVLLALVSLVPGAAMADSIKGRLGVTGKVGFIVPSDNEAEFGFGTNHTDTGLVVGGGLLYGIDDHFAAELDVT
NSSFDSEIGDFDVTDISFGGQYRFTNMRDRRLVPYIGAGLDIISSDFDSDFGGRRHVDTTLGVHLSGGLDYFVEKHVALT
AEAKVVLAPDADITDDGFHSGSFDPTNFSTTFGVRFFFN

Sequences:

>Translated_199_residues
MKKIIVLAVLLALVSLVPGAAMADSIKGRLGVTGKVGFIVPSDNEAEFGFGTNHTDTGLVVGGGLLYGIDDHFAAELDVT
NSSFDSEIGDFDVTDISFGGQYRFTNMRDRRLVPYIGAGLDIISSDFDSDFGGRRHVDTTLGVHLSGGLDYFVEKHVALT
AEAKVVLAPDADITDDGFHSGSFDPTNFSTTFGVRFFFN
>Mature_199_residues
MKKIIVLAVLLALVSLVPGAAMADSIKGRLGVTGKVGFIVPSDNEAEFGFGTNHTDTGLVVGGGLLYGIDDHFAAELDVT
NSSFDSEIGDFDVTDISFGGQYRFTNMRDRRLVPYIGAGLDIISSDFDSDFGGRRHVDTTLGVHLSGGLDYFVEKHVALT
AEAKVVLAPDADITDDGFHSGSFDPTNFSTTFGVRFFFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21268; Mature: 21268

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIVLAVLLALVSLVPGAAMADSIKGRLGVTGKVGFIVPSDNEAEFGFGTNHTDTGLV
CCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEE
VGGGLLYGIDDHFAAELDVTNSSFDSEIGDFDVTDISFGGQYRFTNMRDRRLVPYIGAGL
EECEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCEEEECCCCCCEECCEECCCH
DIISSDFDSDFGGRRHVDTTLGVHLSGGLDYFVEKHVALTAEAKVVLAPDADITDDGFHS
HEECCCCCCCCCCCEEECEEEEEEEECCHHHHHHCEEEEEECEEEEECCCCCCCCCCCCC
GSFDPTNFSTTFGVRFFFN
CCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKKIIVLAVLLALVSLVPGAAMADSIKGRLGVTGKVGFIVPSDNEAEFGFGTNHTDTGLV
CCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEE
VGGGLLYGIDDHFAAELDVTNSSFDSEIGDFDVTDISFGGQYRFTNMRDRRLVPYIGAGL
EECEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCEEEECCCCCCEECCEECCCH
DIISSDFDSDFGGRRHVDTTLGVHLSGGLDYFVEKHVALTAEAKVVLAPDADITDDGFHS
HEECCCCCCCCCCCEEECEEEEEEEECCHHHHHHCEEEEEECEEEEECCCCCCCCCCCCC
GSFDPTNFSTTFGVRFFFN
CCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA