| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is cyaA [H]
Identifier: 197116696
GI number: 197116696
Start: 362205
End: 364223
Strand: Direct
Name: cyaA [H]
Synonym: Gbem_0296
Alternate gene names: 197116696
Gene position: 362205-364223 (Clockwise)
Preceding gene: 197116689
Following gene: 308535155
Centisome position: 7.85
GC content: 64.78
Gene sequence:
>2019_bases ATGCAAAACCCGTTCAACGTTCGGCGTTCAAGGTTCGCTGCCCCATCGCGTCGTCATCTCAGCTCAGCCACAATCCGCTT CCTTATCGGCTGCGCCGTGACCGCGCTCTTTTGCCTGTTGCTGGTTGAGAATCCGCTCCCGCTGGAGATCACCGAGGCGA AGCTCTACGACCTCCGTTTCCATCTGCGCGGCCCGGTGAAGGCGCCGGACCAGGTGGTGATAGCGGTCATCGACGAGAAA AGCCTGGCGAGGCTGGGGCGCTGGCCCTGGAGCCGCGAGGTGATGGCGGGGCTGGTGGACAAGCTGGCCCGGGCCGAGGC GGCGGTGATCGCCTTCGACGTGATCTTTCCCGAAAGCGACGAGGACGACCGGATTCTCTCCCGCGCCATAGCCGACGCCG GCAACGTCGTTCTTCCCATCGTCTTCGACTTCGAGACCGCCTCCAAACGGCGCGCCAACCCGGACCTGGAGCCGTCGGCG CTTACCGCGATCCTGGAACCTGAGCTGTACCGGAACTTCCCCCCCATAACCTCGGGCGGGGTACCGATCATGCCGGTGAA GCCGCTTAGGGATAGCGCCATGTCGCTGGCGCACATCAGCATGCTGCCCGATTACTTCGACGGGACGCTCCGCTGGGAGG CCCTTGTGGTCGCCTACGACGGCCTCCTCTACCCCTCCCTGGGACTCAAGAGCGCCGCCTTCTTCAAGGGGGTCTCCGCA GACAAGCTGCAGGTGCACGCCGCCAGTTCCATCGCGGTCGGCAATACGGTGATCCCCACCGACCGCTGGGGGCGCATGCC GATCAACTACTACGGGCCGGGGCGGACGCTGCGCCACATCTCCATCGCGGACATCGTCGACGGCAAGGTGGGCGCGAAAG AGCTCGGCAACCGGATCGTCTTCATCGGCGCCTCCGCCGTCGGCATGCTGGATCTAAGGGTCACCCCATTCACGGCGGTC ATGCCCGGGGTGGAGAAGCAGGCGACCATCGCCGCTTCCATCCTGGAGAACCGGTTCCTGGTGAAAGCGACAAAGGGGGA GGACCTTCTCTTCCTGCTCCTGACGGGGTTGGCCATGGCGCTGGTCTTGAGCCGCTTGCGGCTTTTGTGGGGGGCGGTGG CGGTAGCGGCCGGCGGTGCGGCCATCGCTGCCGCCGGGGTCGTCCTCTTCAGCCGCTTCGGCGTGTGGGTGAACCTCGCC TGCCCGATGGGGAACGTCCTTTGCCTCTTCATGTCGGTGACCGGCTGGAACTACACGGTCGAGGAGCGCCGCGCCCGCAG GATACGCGCCATGTTCTCAAGCTACGTCACCACGACCATCGTCAACGAGCTGATCGAGAACCCGGCCCTGGCGAGGCTCG GCGGCGAGAAGCGCGAGATAAGCATCCTCTTCTCCGACGTGAGGGGGTTCACCACCTTTTCCGAGCAGCACGCGCCGGAG GAAGTGGTCGCCCTCCTGAACGAGTACCTGGGGGAGATGACCGACGTCATCCTCAAGTGGGGGGGGACCCTCGATAAGTT CATCGGCGACGCCATCATGGTCTTTTGGAACGCGCCGCTTCCCTGCGCCGACCACGCCGAGCGAGCGGTGCGCTGCGCGC TGGAGTTACAGGCGCGGCTTGCGGAACTCCACGGGAAGTGGGACCGGGAGGGGAAACCGAAGCTTAGCTGCGGCATCGGC ATCAACACCGGCGAGGTCATCGTCGGGAACATCGGCGCCGAGGGGAAGAAGATGGACTACACCGTCATTGGCGACGAGGT GAACCTGGCGAGCCGGGTCGAGTCGCTGACCCGCCGCTTCGATGCGGGGATCCTCATCACCGAGAAGACGGTGGAGAAGC TGCGAGGCGCCATCGAGGCGGGGACGCTCTCCGGCATCGAGTTGAGCGGCATCAGCCGGGTGATCGTCAAAGGGAAGGAG CAGCCGGTGACGCTCTACACCGCAGTTACCAATGGAACCGCTCCCGCCGTCATCATCGAGTGCGAGGAGATGGAACCTGT GAGACTGACGGAAAAATAA
Upstream 100 bases:
>100_bases ATGTCGAAACGTTACAGGTATAGCTCATCGGCAGATAGATTCATGAACTGAAGGAATTGCTCGCAGACAAGAGGCGACTC CTTCCCGGGGCGCTCCCCTT
Downstream 100 bases:
>100_bases AAGCCCAACCCCAAAACCATTAGCAAGGAGAAAATCTGAGGACTTCTGAGAACTGCCTTGACGGAGAACTGTCTTAACCT TCCGTTTCGGTTCTCTCAGA
Product: CHASE2 sensor adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 1; Adenylyl cyclase 1; AC 1 [H]
Number of amino acids: Translated: 672; Mature: 672
Protein sequence:
>672_residues MQNPFNVRRSRFAAPSRRHLSSATIRFLIGCAVTALFCLLLVENPLPLEITEAKLYDLRFHLRGPVKAPDQVVIAVIDEK SLARLGRWPWSREVMAGLVDKLARAEAAVIAFDVIFPESDEDDRILSRAIADAGNVVLPIVFDFETASKRRANPDLEPSA LTAILEPELYRNFPPITSGGVPIMPVKPLRDSAMSLAHISMLPDYFDGTLRWEALVVAYDGLLYPSLGLKSAAFFKGVSA DKLQVHAASSIAVGNTVIPTDRWGRMPINYYGPGRTLRHISIADIVDGKVGAKELGNRIVFIGASAVGMLDLRVTPFTAV MPGVEKQATIAASILENRFLVKATKGEDLLFLLLTGLAMALVLSRLRLLWGAVAVAAGGAAIAAAGVVLFSRFGVWVNLA CPMGNVLCLFMSVTGWNYTVEERRARRIRAMFSSYVTTTIVNELIENPALARLGGEKREISILFSDVRGFTTFSEQHAPE EVVALLNEYLGEMTDVILKWGGTLDKFIGDAIMVFWNAPLPCADHAERAVRCALELQARLAELHGKWDREGKPKLSCGIG INTGEVIVGNIGAEGKKMDYTVIGDEVNLASRVESLTRRFDAGILITEKTVEKLRGAIEAGTLSGIELSGISRVIVKGKE QPVTLYTAVTNGTAPAVIIECEEMEPVRLTEK
Sequences:
>Translated_672_residues MQNPFNVRRSRFAAPSRRHLSSATIRFLIGCAVTALFCLLLVENPLPLEITEAKLYDLRFHLRGPVKAPDQVVIAVIDEK SLARLGRWPWSREVMAGLVDKLARAEAAVIAFDVIFPESDEDDRILSRAIADAGNVVLPIVFDFETASKRRANPDLEPSA LTAILEPELYRNFPPITSGGVPIMPVKPLRDSAMSLAHISMLPDYFDGTLRWEALVVAYDGLLYPSLGLKSAAFFKGVSA DKLQVHAASSIAVGNTVIPTDRWGRMPINYYGPGRTLRHISIADIVDGKVGAKELGNRIVFIGASAVGMLDLRVTPFTAV MPGVEKQATIAASILENRFLVKATKGEDLLFLLLTGLAMALVLSRLRLLWGAVAVAAGGAAIAAAGVVLFSRFGVWVNLA CPMGNVLCLFMSVTGWNYTVEERRARRIRAMFSSYVTTTIVNELIENPALARLGGEKREISILFSDVRGFTTFSEQHAPE EVVALLNEYLGEMTDVILKWGGTLDKFIGDAIMVFWNAPLPCADHAERAVRCALELQARLAELHGKWDREGKPKLSCGIG INTGEVIVGNIGAEGKKMDYTVIGDEVNLASRVESLTRRFDAGILITEKTVEKLRGAIEAGTLSGIELSGISRVIVKGKE QPVTLYTAVTNGTAPAVIIECEEMEPVRLTEK >Mature_672_residues MQNPFNVRRSRFAAPSRRHLSSATIRFLIGCAVTALFCLLLVENPLPLEITEAKLYDLRFHLRGPVKAPDQVVIAVIDEK SLARLGRWPWSREVMAGLVDKLARAEAAVIAFDVIFPESDEDDRILSRAIADAGNVVLPIVFDFETASKRRANPDLEPSA LTAILEPELYRNFPPITSGGVPIMPVKPLRDSAMSLAHISMLPDYFDGTLRWEALVVAYDGLLYPSLGLKSAAFFKGVSA DKLQVHAASSIAVGNTVIPTDRWGRMPINYYGPGRTLRHISIADIVDGKVGAKELGNRIVFIGASAVGMLDLRVTPFTAV MPGVEKQATIAASILENRFLVKATKGEDLLFLLLTGLAMALVLSRLRLLWGAVAVAAGGAAIAAAGVVLFSRFGVWVNLA CPMGNVLCLFMSVTGWNYTVEERRARRIRAMFSSYVTTTIVNELIENPALARLGGEKREISILFSDVRGFTTFSEQHAPE EVVALLNEYLGEMTDVILKWGGTLDKFIGDAIMVFWNAPLPCADHAERAVRCALELQARLAELHGKWDREGKPKLSCGIG INTGEVIVGNIGAEGKKMDYTVIGDEVNLASRVESLTRRFDAGILITEKTVEKLRGAIEAGTLSGIELSGISRVIVKGKE QPVTLYTAVTNGTAPAVIIECEEMEPVRLTEK
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate cyclase domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17551720, Length=187, Percent_Identity=30.4812834224599, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71989822, Length=194, Percent_Identity=31.9587628865979, Blast_Score=73, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71989805, Length=177, Percent_Identity=30.5084745762712, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17508769, Length=143, Percent_Identity=34.2657342657343, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI193206632, Length=138, Percent_Identity=35.5072463768116, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17534659, Length=194, Percent_Identity=29.8969072164948, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI161078020, Length=275, Percent_Identity=28, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24642014, Length=215, Percent_Identity=28.8372093023256, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI62484298, Length=138, Percent_Identity=34.0579710144928, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI62484477, Length=138, Percent_Identity=34.0579710144928, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI116008008, Length=138, Percent_Identity=34.0579710144928, Blast_Score=70, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 [H]
Pfam domain/function: PF00211 Guanylate_cyc [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 73194; Mature: 73194
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNPFNVRRSRFAAPSRRHLSSATIRFLIGCAVTALFCLLLVENPLPLEITEAKLYDLRF CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEE HLRGPVKAPDQVVIAVIDEKSLARLGRWPWSREVMAGLVDKLARAEAAVIAFDVIFPESD EECCCCCCCCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEEEEEECCCC EDDRILSRAIADAGNVVLPIVFDFETASKRRANPDLEPSALTAILEPELYRNFPPITSGG CHHHHHHHHHHCCCCEEEEEEEECCCCHHCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCC VPIMPVKPLRDSAMSLAHISMLPDYFDGTLRWEALVVAYDGLLYPSLGLKSAAFFKGVSA CCEEECCCCHHHHHHHHHHHHCHHHCCCCEEEEEEEEEECCEECCCCCCCHHHHHCCCCC DKLQVHAASSIAVGNTVIPTDRWGRMPINYYGPGRTLRHISIADIVDGKVGAKELGNRIV CCEEEEECCEEEECCEECCCCCCCCCCEEEECCCCEEEEEEHHHHHCCCCCHHHHCCEEE FIGASAVGMLDLRVTPFTAVMPGVEKQATIAASILENRFLVKATKGEDLLFLLLTGLAMA EEECCCEEEEEEEECCHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHH LVLSRLRLLWGAVAVAAGGAAIAAAGVVLFSRFGVWVNLACPMGNVLCLFMSVTGWNYTV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHEEHEEECCCCCEEH EERRARRIRAMFSSYVTTTIVNELIENPALARLGGEKREISILFSDVRGFTTFSEQHAPE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEEEHHCCCCCCHHCCCHH EVVALLNEYLGEMTDVILKWGGTLDKFIGDAIMVFWNAPLPCADHAERAVRCALELQARL HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH AELHGKWDREGKPKLSCGIGINTGEVIVGNIGAEGKKMDYTVIGDEVNLASRVESLTRRF HHHCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH DAGILITEKTVEKLRGAIEAGTLSGIELSGISRVIVKGKEQPVTLYTAVTNGTAPAVIIE CCCEEEEHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCCEEEEEEEECCCCCEEEEE CEEMEPVRLTEK ECCCCCEECCCC >Mature Secondary Structure MQNPFNVRRSRFAAPSRRHLSSATIRFLIGCAVTALFCLLLVENPLPLEITEAKLYDLRF CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEE HLRGPVKAPDQVVIAVIDEKSLARLGRWPWSREVMAGLVDKLARAEAAVIAFDVIFPESD EECCCCCCCCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEEEEEECCCC EDDRILSRAIADAGNVVLPIVFDFETASKRRANPDLEPSALTAILEPELYRNFPPITSGG CHHHHHHHHHHCCCCEEEEEEEECCCCHHCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCC VPIMPVKPLRDSAMSLAHISMLPDYFDGTLRWEALVVAYDGLLYPSLGLKSAAFFKGVSA CCEEECCCCHHHHHHHHHHHHCHHHCCCCEEEEEEEEEECCEECCCCCCCHHHHHCCCCC DKLQVHAASSIAVGNTVIPTDRWGRMPINYYGPGRTLRHISIADIVDGKVGAKELGNRIV CCEEEEECCEEEECCEECCCCCCCCCCEEEECCCCEEEEEEHHHHHCCCCCHHHHCCEEE FIGASAVGMLDLRVTPFTAVMPGVEKQATIAASILENRFLVKATKGEDLLFLLLTGLAMA EEECCCEEEEEEEECCHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHH LVLSRLRLLWGAVAVAAGGAAIAAAGVVLFSRFGVWVNLACPMGNVLCLFMSVTGWNYTV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHEEHEEECCCCCEEH EERRARRIRAMFSSYVTTTIVNELIENPALARLGGEKREISILFSDVRGFTTFSEQHAPE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEEEHHCCCCCCHHCCCHH EVVALLNEYLGEMTDVILKWGGTLDKFIGDAIMVFWNAPLPCADHAERAVRCALELQARL HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH AELHGKWDREGKPKLSCGIGINTGEVIVGNIGAEGKKMDYTVIGDEVNLASRVESLTRRF HHHCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH DAGILITEKTVEKLRGAIEAGTLSGIELSGISRVIVKGKEQPVTLYTAVTNGTAPAVIIE CCCEEEEHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCCEEEEEEEECCCCCEEEEE CEEMEPVRLTEK ECCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]