| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116661
Identifier: 197116661
GI number: 197116661
Start: 310735
End: 311055
Strand: Reverse
Name: 197116661
Synonym: Gbem_0261
Alternate gene names: NA
Gene position: 311055-310735 (Counterclockwise)
Preceding gene: 197116662
Following gene: 197116660
Centisome position: 6.74
GC content: 61.06
Gene sequence:
>321_bases ATGACCAAGATATTACCGATAGCGATACTCCTCCTTACGGCCGGGGCCGCTCAGGCCGAAGAGCTGGTCTGCCAGGGGAA CATCGTCAGCACCCAAGGGGAAGGGATAGTGGCCCGAAAGCACCGGTTCGAGGTCAGCGGCATCGCCGGTGCCGATATTG GGGCCGTACTGGAGCAGTGCCGGAAAATTGCACTGGAGCGGCAGGTGCGGGCAGCCAGGAAAAACCCGGGAGGGAGTTTC AGGAGAATCTCGGAGGTCGAGTTGGAGTGCACCCGGGGGCCGGAGAAAACCAAGGTTCGCCGCAATATCCAGACGGAGTA G
Upstream 100 bases:
>100_bases CCGCGGAACGGCAGCAGCGGTCGGCAGGGGGAGACCAGAGGGCTCTCAGGAGGCATCGCCGCACCCTGGAAGAGTGACCC AGCAGGATAAAGGAGCTCAG
Downstream 100 bases:
>100_bases GGGGGCTGATGAAGGCGCGACCTAGGGGACTGGCTCCGAAGGTGCCTGTCCCCCTGCGATCCGGTCCCTTTCCCGTAGAC GCCCCCCTTTGACGGCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTKILPIAILLLTAGAAQAEELVCQGNIVSTQGEGIVARKHRFEVSGIAGADIGAVLEQCRKIALERQVRAARKNPGGSF RRISEVELECTRGPEKTKVRRNIQTE
Sequences:
>Translated_106_residues MTKILPIAILLLTAGAAQAEELVCQGNIVSTQGEGIVARKHRFEVSGIAGADIGAVLEQCRKIALERQVRAARKNPGGSF RRISEVELECTRGPEKTKVRRNIQTE >Mature_105_residues TKILPIAILLLTAGAAQAEELVCQGNIVSTQGEGIVARKHRFEVSGIAGADIGAVLEQCRKIALERQVRAARKNPGGSFR RISEVELECTRGPEKTKVRRNIQTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11524; Mature: 11392
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKILPIAILLLTAGAAQAEELVCQGNIVSTQGEGIVARKHRFEVSGIAGADIGAVLEQC CCCHHHHHHHHHHCCCCHHHHHHHCCCEECCCCCCEEECCCEEEECCCCCCCHHHHHHHH RKIALERQVRAARKNPGGSFRRISEVELECTRGPEKTKVRRNIQTE HHHHHHHHHHHHHCCCCCCCEEHHHHEEEECCCCCHHHHHHCCCCC >Mature Secondary Structure TKILPIAILLLTAGAAQAEELVCQGNIVSTQGEGIVARKHRFEVSGIAGADIGAVLEQC CCHHHHHHHHHHCCCCHHHHHHHCCCEECCCCCCEEECCCEEEECCCCCCCHHHHHHHH RKIALERQVRAARKNPGGSFRRISEVELECTRGPEKTKVRRNIQTE HHHHHHHHHHHHHCCCCCCCEEHHHHEEEECCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA