| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is hisC
Identifier: 197116636
GI number: 197116636
Start: 280211
End: 281263
Strand: Direct
Name: hisC
Synonym: Gbem_0236
Alternate gene names: 197116636
Gene position: 280211-281263 (Clockwise)
Preceding gene: 197116635
Following gene: 197116637
Centisome position: 6.07
GC content: 63.06
Gene sequence:
>1053_bases ATGATCGCCCTGCGGGAAAACATCGCAGAAATGGCAGGCTATGTCCCCGGTTTCCAGCCGCTCGATGTGGATTCGTACAT CAAGCTGAACACCAACGAGAATCCTTATCCCCCCTCACCGAAGGTGTTGGAGGCGATCGCCAAGGAGGCCGGAGAGGGCC TGCGCCGGTACCCCGACGCCGCGAGCCGCCTGGCGCGGGAGGAGGCGGCGAAGGTGTACGGCTTCGATCCCTCCTGGATC ATCATGGCCAACGGCTCGGACGAGGTCCTCAACAACCTGATCCGCGCCTGTGCCGGCGAAGGGGAGGAAATCGCCTTCAT AAACCCCTCCTACTCGTACTACGGCACCCTCGCGGAAGTTCAGGGCGCGCGCGTCAGGACCTTCGGGCTTTCCGAGAGCT TTGAGCCGGAAGGGATCCCGGAGCATTACGACGGCAAGCTCTTCTTTCTGACCAACCCCAATGCACCGCTTGGTTTCACC TACAGCCAGCGCTACATCGCTGACCTGGCGGGGCGCCTCTCCGGGGTGCTGGTGGTGGACGAGGCGTACGTGGATTTCGC CGAAGAGACTTCGCTGGAACTGGTGCGCAGCTTCGACAACGTCGTGGTGACCCGCACCTTCTCCAAGAGCTATTCCCTGG CCGGCATGCGGCTTGGTCTCGCGATCGCCCGCCCGGAGATCATCGCGGCGCTGAACAAGATTCGCGACCACTACAACCTG GACCGCCTGGCGCAGGCCGCTGCCGCCGCGGCGCTCGCGGACCAGCCGTATTTCCAGGAGTGCGTAAGGAAGATCAAGGA GACCCGCGCCTGGTTCACGGCGGAACTGCAGCAGCTGGGGTATCAGGTGATACCTTCCAGCGGCAATTTCGTCTTTGCCA GCCCGCCCGACCGAGACGGTACCCGTATCTACCAGGGGCTTTACGACAGGAAGATCCTGGTGCGCCACTTCACCGACCCG AAGCTGGCCCACGGTCTCAGGATCAGTATCGGCTCCAGGGAGGAGATGGAGCAGACTGTCAAGGCGCTACGCGAACTGGG TCCCGGGCGGTAG
Upstream 100 bases:
>100_bases GGCTCTATCGCCTCTTCGTTGTCAATTGTCAATTGTCCATTGTCAATTGCCTTTGCCTCTTGTTATATTCACCTGATCTT TTGCCCTGAAAGGAGTTGCC
Downstream 100 bases:
>100_bases CAAAGAGCGTTCTGTCTGTGCAGGGAAGAAAATTTTACTCTGAACGGCACCTTGGACTTGTACTGAAAGTGAAAAGGTTG TAATCTTTGCGGCTGGGCGC
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MIALRENIAEMAGYVPGFQPLDVDSYIKLNTNENPYPPSPKVLEAIAKEAGEGLRRYPDAASRLAREEAAKVYGFDPSWI IMANGSDEVLNNLIRACAGEGEEIAFINPSYSYYGTLAEVQGARVRTFGLSESFEPEGIPEHYDGKLFFLTNPNAPLGFT YSQRYIADLAGRLSGVLVVDEAYVDFAEETSLELVRSFDNVVVTRTFSKSYSLAGMRLGLAIARPEIIAALNKIRDHYNL DRLAQAAAAAALADQPYFQECVRKIKETRAWFTAELQQLGYQVIPSSGNFVFASPPDRDGTRIYQGLYDRKILVRHFTDP KLAHGLRISIGSREEMEQTVKALRELGPGR
Sequences:
>Translated_350_residues MIALRENIAEMAGYVPGFQPLDVDSYIKLNTNENPYPPSPKVLEAIAKEAGEGLRRYPDAASRLAREEAAKVYGFDPSWI IMANGSDEVLNNLIRACAGEGEEIAFINPSYSYYGTLAEVQGARVRTFGLSESFEPEGIPEHYDGKLFFLTNPNAPLGFT YSQRYIADLAGRLSGVLVVDEAYVDFAEETSLELVRSFDNVVVTRTFSKSYSLAGMRLGLAIARPEIIAALNKIRDHYNL DRLAQAAAAAALADQPYFQECVRKIKETRAWFTAELQQLGYQVIPSSGNFVFASPPDRDGTRIYQGLYDRKILVRHFTDP KLAHGLRISIGSREEMEQTVKALRELGPGR >Mature_350_residues MIALRENIAEMAGYVPGFQPLDVDSYIKLNTNENPYPPSPKVLEAIAKEAGEGLRRYPDAASRLAREEAAKVYGFDPSWI IMANGSDEVLNNLIRACAGEGEEIAFINPSYSYYGTLAEVQGARVRTFGLSESFEPEGIPEHYDGKLFFLTNPNAPLGFT YSQRYIADLAGRLSGVLVVDEAYVDFAEETSLELVRSFDNVVVTRTFSKSYSLAGMRLGLAIARPEIIAALNKIRDHYNL DRLAQAAAAAALADQPYFQECVRKIKETRAWFTAELQQLGYQVIPSSGNFVFASPPDRDGTRIYQGLYDRKILVRHFTDP KLAHGLRISIGSREEMEQTVKALRELGPGR
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=353, Percent_Identity=29.1784702549575, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1788722, Length=246, Percent_Identity=29.2682926829268, Blast_Score=76, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322075, Length=354, Percent_Identity=29.3785310734463, Blast_Score=114, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_GEOBB (B5E9W9)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002137063.1 - ProteinModelPortal: B5E9W9 - GeneID: 6783061 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_0236 - HOGENOM: HBG646350 - OMA: AEMAGYV - ProtClustDB: CLSK829109 - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 38905; Mature: 38905
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIALRENIAEMAGYVPGFQPLDVDSYIKLNTNENPYPPSPKVLEAIAKEAGEGLRRYPDA CCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH ASRLAREEAAKVYGFDPSWIIMANGSDEVLNNLIRACAGEGEEIAFINPSYSYYGTLAEV HHHHHHHHHHHEECCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCHHHEEHHHH QGARVRTFGLSESFEPEGIPEHYDGKLFFLTNPNAPLGFTYSQRYIADLAGRLSGVLVVD CCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEE EAYVDFAEETSLELVRSFDNVVVTRTFSKSYSLAGMRLGLAIARPEIIAALNKIRDHYNL HHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCH DRLAQAAAAAALADQPYFQECVRKIKETRAWFTAELQQLGYQVIPSSGNFVFASPPDRDG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCH TRIYQGLYDRKILVRHFTDPKLAHGLRISIGSREEMEQTVKALRELGPGR HHHHHHHHHHHHHHHCCCCHHHHCCEEEECCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIALRENIAEMAGYVPGFQPLDVDSYIKLNTNENPYPPSPKVLEAIAKEAGEGLRRYPDA CCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH ASRLAREEAAKVYGFDPSWIIMANGSDEVLNNLIRACAGEGEEIAFINPSYSYYGTLAEV HHHHHHHHHHHEECCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCHHHEEHHHH QGARVRTFGLSESFEPEGIPEHYDGKLFFLTNPNAPLGFTYSQRYIADLAGRLSGVLVVD CCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEE EAYVDFAEETSLELVRSFDNVVVTRTFSKSYSLAGMRLGLAIARPEIIAALNKIRDHYNL HHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCH DRLAQAAAAAALADQPYFQECVRKIKETRAWFTAELQQLGYQVIPSSGNFVFASPPDRDG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCH TRIYQGLYDRKILVRHFTDPKLAHGLRISIGSREEMEQTVKALRELGPGR HHHHHHHHHHHHHHHCCCCHHHHCCEEEECCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA