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The map label for this gene is rdoA [H]

Identifier: 197116603

GI number: 197116603

Start: 238123

End: 239109

Strand: Reverse

Name: rdoA [H]

Synonym: Gbem_0203

Alternate gene names: 197116603

Gene position: 239109-238123 (Counterclockwise)

Preceding gene: 197116604

Following gene: 197116597

Centisome position: 5.18

GC content: 62.72

Gene sequence:

>987_bases
ATGAAAGAAACCTCCCATCCCTTTTCCACCCTCACCCCCAACTTCATCATGGACGCCGTCGAAAGCCAGGGATTCCGTTG
CGACTGCCGCACTTCCGCCTTGAACAGTTACGAGAACCGCGTGTACCAAGTGGGGATCGAAGAAGAAAAGCCGCTGATCG
CGAAGTTTTACCGCCCTGGGCGCTGGAGCGACGAGCAGATCAGGGAGGAGCACCAGTTCTGCCTCGAACTGGCGGAACAC
GAGCTGTCGGTGGTCGCTCCTTGGGTGAACCCTGCTGGCGAGACCATATTCCATTTCGACGGGTTCCGGTTCGCCCTCTA
CCCGCGCCAGGGGGGGCACGCCCCCGAGTTCGACAACGACGAAAACCTGGTGATCCTCGGGAGAATGCTGGGGCGCATTC
ACAGCATCGGCGCCATACGCCCCTTCAAGGTGCGCCCCACCCTGGAAAGCCGCAGCTTCGGGCACGACAGCGTAGCCCTC
ATCAAGGAACGCTTCATCCCCGAGGAGTACCGTGCAAGCTACACGGCGGTCACCGACCAGCTCCTTTCCGCCATCGACGC
TGCCTTCGCAAACGCGCAAGGGGTGACCCAGATCAGGGCGCATGGCGATTGCCATGCCGGCAACATCCTGTGGCGGGACG
GCGCACCGCATTTCGTCGACTTCGACGACGCCCGCATGGCGCCGGCGGTGCAGGACCTCTGGATGATGCTTTCGGGAGAG
CGGTCGCGCCAACTGGTGCAACTGGAACAATTGGTGAAGGGGTACACGGAATTCCGCGATTTCCACCCCGGAGAACTCAG
GCTGGTGGAGCCGCTACGCGCCCTGCGCATGCTGCACTACAGCGCCTGGCTGGCCCGGCGCTGGGAGGATCCCACCTTCC
CCATCACCTTCCCCTGGTTCAACACGGTGCGCTACTGGGGCGAGCATATCCTGCAGCTGCGCGAGCAGTTGTCTGCGCTC
GACGAGCCGCCCCTGGAACTTCCTTGA

Upstream 100 bases:

>100_bases
GCGGCCGCGCCCGTCTCTTCGCTTGGTTTTCCGCAATGAATGGTGCTATCTTAGGGGCGCTGGGCCGATCAGGGCGCCAC
GCAGAGGAGAAGCGCCATTT

Downstream 100 bases:

>100_bases
AAGCATAGAAAAAGGCGATCGTGACCGATCGCCTTTTTCTATAACCACCGCGACAGTAGCAGCTTGCAGCCGCCCCCCGC
GCCATTTCCGTCCGGGCGCC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKETSHPFSTLTPNFIMDAVESQGFRCDCRTSALNSYENRVYQVGIEEEKPLIAKFYRPGRWSDEQIREEHQFCLELAEH
ELSVVAPWVNPAGETIFHFDGFRFALYPRQGGHAPEFDNDENLVILGRMLGRIHSIGAIRPFKVRPTLESRSFGHDSVAL
IKERFIPEEYRASYTAVTDQLLSAIDAAFANAQGVTQIRAHGDCHAGNILWRDGAPHFVDFDDARMAPAVQDLWMMLSGE
RSRQLVQLEQLVKGYTEFRDFHPGELRLVEPLRALRMLHYSAWLARRWEDPTFPITFPWFNTVRYWGEHILQLREQLSAL
DEPPLELP

Sequences:

>Translated_328_residues
MKETSHPFSTLTPNFIMDAVESQGFRCDCRTSALNSYENRVYQVGIEEEKPLIAKFYRPGRWSDEQIREEHQFCLELAEH
ELSVVAPWVNPAGETIFHFDGFRFALYPRQGGHAPEFDNDENLVILGRMLGRIHSIGAIRPFKVRPTLESRSFGHDSVAL
IKERFIPEEYRASYTAVTDQLLSAIDAAFANAQGVTQIRAHGDCHAGNILWRDGAPHFVDFDDARMAPAVQDLWMMLSGE
RSRQLVQLEQLVKGYTEFRDFHPGELRLVEPLRALRMLHYSAWLARRWEDPTFPITFPWFNTVRYWGEHILQLREQLSAL
DEPPLELP
>Mature_328_residues
MKETSHPFSTLTPNFIMDAVESQGFRCDCRTSALNSYENRVYQVGIEEEKPLIAKFYRPGRWSDEQIREEHQFCLELAEH
ELSVVAPWVNPAGETIFHFDGFRFALYPRQGGHAPEFDNDENLVILGRMLGRIHSIGAIRPFKVRPTLESRSFGHDSVAL
IKERFIPEEYRASYTAVTDQLLSAIDAAFANAQGVTQIRAHGDCHAGNILWRDGAPHFVDFDDARMAPAVQDLWMMLSGE
RSRQLVQLEQLVKGYTEFRDFHPGELRLVEPLRALRMLHYSAWLARRWEDPTFPITFPWFNTVRYWGEHILQLREQLSAL
DEPPLELP

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=328, Percent_Identity=45.7317073170732, Blast_Score=296, Evalue=2e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 37914; Mature: 37914

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETSHPFSTLTPNFIMDAVESQGFRCDCRTSALNSYENRVYQVGIEEEKPLIAKFYRPG
CCCCCCCCHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHCCEEEECCCCCCCHHHHHCCCC
RWSDEQIREEHQFCLELAEHELSVVAPWVNPAGETIFHFDGFRFALYPRQGGHAPEFDND
CCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCEEEEEEECCCCCCCCCCCC
ENLVILGRMLGRIHSIGAIRPFKVRPTLESRSFGHDSVALIKERFIPEEYRASYTAVTDQ
CCEEEHHHHHHHHHHCCCCCCEEECCCHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
LLSAIDAAFANAQGVTQIRAHGDCHAGNILWRDGAPHFVDFDDARMAPAVQDLWMMLSGE
HHHHHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHCCH
RSRQLVQLEQLVKGYTEFRDFHPGELRLVEPLRALRMLHYSAWLARRWEDPTFPITFPWF
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHH
NTVRYWGEHILQLREQLSALDEPPLELP
HHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKETSHPFSTLTPNFIMDAVESQGFRCDCRTSALNSYENRVYQVGIEEEKPLIAKFYRPG
CCCCCCCCHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHCCEEEECCCCCCCHHHHHCCCC
RWSDEQIREEHQFCLELAEHELSVVAPWVNPAGETIFHFDGFRFALYPRQGGHAPEFDND
CCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCEEEEEEECCCCCCCCCCCC
ENLVILGRMLGRIHSIGAIRPFKVRPTLESRSFGHDSVALIKERFIPEEYRASYTAVTDQ
CCEEEHHHHHHHHHHCCCCCCEEECCCHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
LLSAIDAAFANAQGVTQIRAHGDCHAGNILWRDGAPHFVDFDDARMAPAVQDLWMMLSGE
HHHHHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHCCH
RSRQLVQLEQLVKGYTEFRDFHPGELRLVEPLRALRMLHYSAWLARRWEDPTFPITFPWF
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHH
NTVRYWGEHILQLREQLSALDEPPLELP
HHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]