Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197116597

Identifier: 197116597

GI number: 197116597

Start: 232721

End: 234187

Strand: Reverse

Name: 197116597

Synonym: Gbem_0197

Alternate gene names: NA

Gene position: 234187-232721 (Counterclockwise)

Preceding gene: 197116603

Following gene: 197116596

Centisome position: 5.07

GC content: 64.62

Gene sequence:

>1467_bases
ATGACCAGCGTCCTCTTAATATCGGATACCGAAAGGGTGCAGCGCATCTTCCAAACCCTGGAAGGGAAGGAAGTGCTGAA
ACTGCATACGGCATCGACCCTCCCCTCGGGCGAGGCGCAGATCACCGCTTCCCCGTGCGACTTCACCTTCGTGCAGAGCC
GCATCTCCGGTTTTTCCGGGGACATACTGCTGCGGCACTTGGAGAAGATGCTGCACAAGGGTGCCGTGCTGGTGCTTTTG
GCAGGCGATGCCGAGGATGCTGAACAAGCGCGCAAGCACGGCAGACAGTCGGTCGACCTCACCCTTGCGGACGACCTCCT
GGCGCAGACTCTGCTGGCGGTAGTGACCGGCGCTCCACTCCCGGAGCAGGGGACAATCGAAGCGCCTGCTGCGACCAAGC
CTGCCGCCGCGAAGCAAGAGGCCGCGCCGTTCGCGTCGCCACCGGATACGGAAGAGAAAGAAGCCGAGCGCTCTGCCGCT
TTCGCGGTTTCCCCCTCCCGGACCACTGACCCGCAAGCCTCCCCTTTCGAGGAGGCGATGCAACGTGCTGCATCTAACGT
CGCCCCCATCAAGGCAAGCCTCCTTGAGGTTGAGGAGCGGGTCGAGATCGGCAAGGGCGGCGCCGGGGCGGGAAATACGC
CAGCTCCGCCCGTCCCTCCTGCCGGGCAACCGGTGCGGCCGGACGACATTTATGCCGGAGAGACCCTGCTGGAAGCGATG
CGCCGCGCGGAAAAGAAAAAGAGCCGCCGCCCATACCTTCTCATCCTGCCGGCCCTGGTGCTGATCGCCATCCCGTTCAT
CTCCTACACCGTTGGCAAGAGGTCGCCGGCAAATATCGAAATCGCACCGGCTTTCAAGCCGGCAGCGAAGCCGTCAGCCT
CCCCCCAAGCCCTGCCGCCGAAGGCAGCGCCTGCCGCTCCGCCGGCCGCCCTTGCGGAAAAGCCCGGCACCCCCCCAGCG
CAACCGGCTCTACCGCCGGCTACTCCCCAGACGGCAAAACCAGCGCCGCCACCGCCACCCGCTACGGCTGCGCGTCCCGC
GCCGACCGCGCCGGCTGCACAAAAGGCGGCTCCGCCTGCCGCCACTGCAGCGAAACCTGCCGCCAAGCGCGGAGCCGAGC
GGCTCCCCCCGGTGCTGGAAGGAACCAAACCCGACCCGCAATATGGCAAGACCCACCCGGGGTGGGAGCGATACCTGGGG
CTCAGGGCGGAATACAAGCTCTTCCGTGAGAACAACCTGTACAAAGCCCTTCAGGTGGTTTCTGTCGACGGCGGGACGAT
TTCCGAGGACCTCTTCAGGAGGATCCTGCGGGAGTTCGGCGGGGCGGACGACTACCGCGTCGAGTCGAGCGAAAAGAAAG
GGGGCTACCTGGTCGAGCAGTGCAGCACCAAAGGGAACACCGCGCTCACCATCTATCGCAACCACAATAACCGCAAGATG
AAGGGCTTTGTCGTTTATTACCGTTGA

Upstream 100 bases:

>100_bases
AGGTGCCCTGGAGCTGCAATTTGATCCCATGGGTTGAATAATATTGATTATTGCGCTCCCCTCCCCTAAAATGTCGCGAA
TTCTAGATGAAAAGGAAAAC

Downstream 100 bases:

>100_bases
TGGCCCCGCCGGTCCTGAAATAAAGGAAGTGAGGTAAATTGATGACCAATCCGACCAAGGCCAAGGGAATGCTCCTCTTG
GCGCTCCTTTCGCTGCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MTSVLLISDTERVQRIFQTLEGKEVLKLHTASTLPSGEAQITASPCDFTFVQSRISGFSGDILLRHLEKMLHKGAVLVLL
AGDAEDAEQARKHGRQSVDLTLADDLLAQTLLAVVTGAPLPEQGTIEAPAATKPAAAKQEAAPFASPPDTEEKEAERSAA
FAVSPSRTTDPQASPFEEAMQRAASNVAPIKASLLEVEERVEIGKGGAGAGNTPAPPVPPAGQPVRPDDIYAGETLLEAM
RRAEKKKSRRPYLLILPALVLIAIPFISYTVGKRSPANIEIAPAFKPAAKPSASPQALPPKAAPAAPPAALAEKPGTPPA
QPALPPATPQTAKPAPPPPPATAARPAPTAPAAQKAAPPAATAAKPAAKRGAERLPPVLEGTKPDPQYGKTHPGWERYLG
LRAEYKLFRENNLYKALQVVSVDGGTISEDLFRRILREFGGADDYRVESSEKKGGYLVEQCSTKGNTALTIYRNHNNRKM
KGFVVYYR

Sequences:

>Translated_488_residues
MTSVLLISDTERVQRIFQTLEGKEVLKLHTASTLPSGEAQITASPCDFTFVQSRISGFSGDILLRHLEKMLHKGAVLVLL
AGDAEDAEQARKHGRQSVDLTLADDLLAQTLLAVVTGAPLPEQGTIEAPAATKPAAAKQEAAPFASPPDTEEKEAERSAA
FAVSPSRTTDPQASPFEEAMQRAASNVAPIKASLLEVEERVEIGKGGAGAGNTPAPPVPPAGQPVRPDDIYAGETLLEAM
RRAEKKKSRRPYLLILPALVLIAIPFISYTVGKRSPANIEIAPAFKPAAKPSASPQALPPKAAPAAPPAALAEKPGTPPA
QPALPPATPQTAKPAPPPPPATAARPAPTAPAAQKAAPPAATAAKPAAKRGAERLPPVLEGTKPDPQYGKTHPGWERYLG
LRAEYKLFRENNLYKALQVVSVDGGTISEDLFRRILREFGGADDYRVESSEKKGGYLVEQCSTKGNTALTIYRNHNNRKM
KGFVVYYR
>Mature_487_residues
TSVLLISDTERVQRIFQTLEGKEVLKLHTASTLPSGEAQITASPCDFTFVQSRISGFSGDILLRHLEKMLHKGAVLVLLA
GDAEDAEQARKHGRQSVDLTLADDLLAQTLLAVVTGAPLPEQGTIEAPAATKPAAAKQEAAPFASPPDTEEKEAERSAAF
AVSPSRTTDPQASPFEEAMQRAASNVAPIKASLLEVEERVEIGKGGAGAGNTPAPPVPPAGQPVRPDDIYAGETLLEAMR
RAEKKKSRRPYLLILPALVLIAIPFISYTVGKRSPANIEIAPAFKPAAKPSASPQALPPKAAPAAPPAALAEKPGTPPAQ
PALPPATPQTAKPAPPPPPATAARPAPTAPAAQKAAPPAATAAKPAAKRGAERLPPVLEGTKPDPQYGKTHPGWERYLGL
RAEYKLFRENNLYKALQVVSVDGGTISEDLFRRILREFGGADDYRVESSEKKGGYLVEQCSTKGNTALTIYRNHNNRKMK
GFVVYYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51799; Mature: 51667

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVLLISDTERVQRIFQTLEGKEVLKLHTASTLPSGEAQITASPCDFTFVQSRISGFSG
CCEEEEECCHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCEEEECCCCHHHHHHHHCCCCH
DILLRHLEKMLHKGAVLVLLAGDAEDAEQARKHGRQSVDLTLADDLLAQTLLAVVTGAPL
HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCC
PEQGTIEAPAATKPAAAKQEAAPFASPPDTEEKEAERSAAFAVSPSRTTDPQASPFEEAM
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCHHHHH
QRAASNVAPIKASLLEVEERVEIGKGGAGAGNTPAPPVPPAGQPVRPDDIYAGETLLEAM
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
RRAEKKKSRRPYLLILPALVLIAIPFISYTVGKRSPANIEIAPAFKPAAKPSASPQALPP
HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
KAAPAAPPAALAEKPGTPPAQPALPPATPQTAKPAPPPPPATAARPAPTAPAAQKAAPPA
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
ATAAKPAAKRGAERLPPVLEGTKPDPQYGKTHPGWERYLGLRAEYKLFRENNLYKALQVV
HHHCCHHHHHCHHHCCHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCEEEEEEE
SVDGGTISEDLFRRILREFGGADDYRVESSEKKGGYLVEQCSTKGNTALTIYRNHNNRKM
ECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEHHHHCCCCCEEEEEEEECCCCEE
KGFVVYYR
EEEEEEEC
>Mature Secondary Structure 
TSVLLISDTERVQRIFQTLEGKEVLKLHTASTLPSGEAQITASPCDFTFVQSRISGFSG
CEEEEECCHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCEEEECCCCHHHHHHHHCCCCH
DILLRHLEKMLHKGAVLVLLAGDAEDAEQARKHGRQSVDLTLADDLLAQTLLAVVTGAPL
HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCC
PEQGTIEAPAATKPAAAKQEAAPFASPPDTEEKEAERSAAFAVSPSRTTDPQASPFEEAM
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCHHHHH
QRAASNVAPIKASLLEVEERVEIGKGGAGAGNTPAPPVPPAGQPVRPDDIYAGETLLEAM
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
RRAEKKKSRRPYLLILPALVLIAIPFISYTVGKRSPANIEIAPAFKPAAKPSASPQALPP
HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
KAAPAAPPAALAEKPGTPPAQPALPPATPQTAKPAPPPPPATAARPAPTAPAAQKAAPPA
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
ATAAKPAAKRGAERLPPVLEGTKPDPQYGKTHPGWERYLGLRAEYKLFRENNLYKALQVV
HHHCCHHHHHCHHHCCHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCEEEEEEE
SVDGGTISEDLFRRILREFGGADDYRVESSEKKGGYLVEQCSTKGNTALTIYRNHNNRKM
ECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEHHHHCCCCCEEEEEEEECCCCEE
KGFVVYYR
EEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA