Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116602

Identifier: 197116602

GI number: 197116602

Start: 237512

End: 238015

Strand: Direct

Name: 197116602

Synonym: Gbem_0202

Alternate gene names: NA

Gene position: 237512-238015 (Clockwise)

Preceding gene: 197116601

Following gene: 197116607

Centisome position: 5.15

GC content: 58.73

Gene sequence:

>504_bases
ATGAAAAAGCAAGCAGCTTTGTTTATCGTCATCTCGCTTTGCTCGGGATGCGCCATCACAGGCAAGAACCCTCAGGGCAA
CCTGGTGCAGCGTTATACGGCGTCCAGGCATTTGGAGCAGGCCGATGAGATGCTGGAGAAGGGGGATAAGGCCGGTGCGG
TCAAAGCGCTCCATGCTGTGGTCAGTGCACCCGCGGCTCCCGGAGTAACCGATCAGGCGCTTTTCCGTCTGGCCCTTTTG
ACCTTGAAGCCTGGGCTGGAACGCCCGGCATCGGCACAGGCCCAGCAGCTTCTCAAGCGTCTGGCAAAGGAGTACCCCAA
GAGCCCCTGGACCGCGCAGGCGGACCACCTGAACGACCTGATCGAGGTGGCGGACGATTTGAGGCGCCAGAACAAGAGCC
TCAAGGGGAACAACCAGTCCCTCAATAAGGAGATCAACGACCTGAACAAGAACCTCGAACGGCTGAAGCAGCTCGATCAG
GAACTGGAAAAAAGCGCGCGCTGA

Upstream 100 bases:

>100_bases
CCTCGGCCGTAGACATTGCCAGGGCAGCGGCCAAAGTGAAGGACAGCGCCAAGGAGACCCCGGGAAGCAACTATCTTGTA
GGTACACCAGGGGATGCAGC

Downstream 100 bases:

>100_bases
TTGTCGGGGCGCCCGGACGGAAATGGCGCGGGGGGCGGCTGCAAGCTGCTACTGTCGCGGTGGTTATAGAAAAAGGCGAT
CGGTCACGATCGCCTTTTTC

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKKQAALFIVISLCSGCAITGKNPQGNLVQRYTASRHLEQADEMLEKGDKAGAVKALHAVVSAPAAPGVTDQALFRLALL
TLKPGLERPASAQAQQLLKRLAKEYPKSPWTAQADHLNDLIEVADDLRRQNKSLKGNNQSLNKEINDLNKNLERLKQLDQ
ELEKSAR

Sequences:

>Translated_167_residues
MKKQAALFIVISLCSGCAITGKNPQGNLVQRYTASRHLEQADEMLEKGDKAGAVKALHAVVSAPAAPGVTDQALFRLALL
TLKPGLERPASAQAQQLLKRLAKEYPKSPWTAQADHLNDLIEVADDLRRQNKSLKGNNQSLNKEINDLNKNLERLKQLDQ
ELEKSAR
>Mature_167_residues
MKKQAALFIVISLCSGCAITGKNPQGNLVQRYTASRHLEQADEMLEKGDKAGAVKALHAVVSAPAAPGVTDQALFRLALL
TLKPGLERPASAQAQQLLKRLAKEYPKSPWTAQADHLNDLIEVADDLRRQNKSLKGNNQSLNKEINDLNKNLERLKQLDQ
ELEKSAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18373; Mature: 18373

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQAALFIVISLCSGCAITGKNPQGNLVQRYTASRHLEQADEMLEKGDKAGAVKALHAV
CCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VSAPAAPGVTDQALFRLALLTLKPGLERPASAQAQQLLKRLAKEYPKSPWTAQADHLNDL
HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
IEVADDLRRQNKSLKGNNQSLNKEINDLNKNLERLKQLDQELEKSAR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKQAALFIVISLCSGCAITGKNPQGNLVQRYTASRHLEQADEMLEKGDKAGAVKALHAV
CCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VSAPAAPGVTDQALFRLALLTLKPGLERPASAQAQQLLKRLAKEYPKSPWTAQADHLNDL
HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
IEVADDLRRQNKSLKGNNQSLNKEINDLNKNLERLKQLDQELEKSAR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA