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The map label for this gene is 197116601

Identifier: 197116601

GI number: 197116601

Start: 236175

End: 237515

Strand: Direct

Name: 197116601

Synonym: Gbem_0201

Alternate gene names: NA

Gene position: 236175-237515 (Clockwise)

Preceding gene: 197116600

Following gene: 197116602

Centisome position: 5.12

GC content: 60.33

Gene sequence:

>1341_bases
ATGTCATCACCCACGAATACAAATGCTCCCGCGAAGCTCAGCCTGCCAAGGCTGACCCTGATACAGAAGATCGGCGCGGG
CTATGCTGCCATGGCTTTTTTCACCATGGCAGCACTAGTCTTCTCTACTTTCAACATCTACAAGAGCAACAACACTTCCA
GGCAGATCGCAAACAACGACCTTCCGGTAATGAGCGCCCTGATTGAACTGCGCACCTCGCTTCTGGCCCAGGAAGGGTTC
GCCGGCAGATACGCTATCCTGCACGATCCCGCTTTCATCGAGCTGTTCCGGCAGCGCGAGTCGGAAGCGCTTCATAACCT
CGCGGTCTTGGAGCGTTCAGGCGCGCAGCAGGACGCAATACATCTAAAGCAGCTTTACCTAAGCTATCAGGGGGCGTCGG
CGAAACTGTTCTCCGGTACCCCGGCGAGCGAAATTGGCTTACGGCGGTCGGCGCGGCAGCTTCTGGACGCGGTGGACGCC
ACCTACATTAAGCGCAAAGCGATCCTGCACGCGGTGCTGGCGAAGGCGAACGAGCAGCAGAAGGCCACCATCTGGTGGAC
GGTGGCCATCTCCCTGACCGGGTTCCTGCTGGCCATAGGGGTCGCCCCCTTCGTCACCTATCGCATCTTCGGGGCCATCA
GGAAATTGCAAAGCGCAACGCACAGGATCGCCGCCGGGGATTTCGACTACGACCCGCAGATCCCGCTCGGGGACGAGATC
AGCGACCTGGCGAGGGATTTCACCAAGATGGCGGCGAGGCTAAAGGTACTCGAACAGATGAGTCTCGATGCCAGCCCCCT
GACCAGGCTTCCCGGCAACTTCGCCATCGAACGGGAACTGGAGGAGCGGCTGAAAAGCGGGGCATCCTTCGCCTTTTGCT
ACGCCGACCTGGGTAACTTCAAGCCGTTCGGCGACCACTACGGTTATGCCAAAGGGAGCGAGCTGCTTCGGCTGACAGGC
GACCTGATCCAGGCGGCGGTCAAGGCGCAAGCAGGCGGCGCCGGGTTCGTCGGCCACGTGGGAGGCGACGACTTCGTGAT
GGTGGTCCCGACCGACAGGGTAAAACCCGTCTGCGAGACGGTGATTGCGAACTTCAGCGCCGAGGTTGTGAAGCACTACA
GCCAGCAGGACCTGAAGGCAGGCGGCATTGAGGGATGCGACCGCTACGGGGTGCAGCGTTTCTTCCCGGTTGTCACCATT
TCCATCGCCGCGATCATCTGCGGCAGGGACCAATTCTCCTCGGCCGTAGACATTGCCAGGGCAGCGGCCAAAGTGAAGGA
CAGCGCCAAGGAGACCCCGGGAAGCAACTATCTTGTAGGTACACCAGGGGATGCAGCATGA

Upstream 100 bases:

>100_bases
CTGAAGAGGCGGCAGCAAGGGTACTGTCACAGTGGAAGGAGTATGTTGCTTCGGACCGACAGCGTTGACTTTGCTCTCAG
CGTCCTCTAATATCTAGCCC

Downstream 100 bases:

>100_bases
AAAAGCAAGCAGCTTTGTTTATCGTCATCTCGCTTTGCTCGGGATGCGCCATCACAGGCAAGAACCCTCAGGGCAACCTG
GTGCAGCGTTATACGGCGTC

Product: nucleotide cyclase, HAMP/GGDEF-like domain-containing protein

Products: NA

Alternate protein names: Diguanylate Cyclase/Phosphodiesterase; Diguanylate Cyclase; GGDEF Domain-Containing Protein; GGDEF Domain Protein; Sensory Box/GGDEF Family Protein; Histidine Kinase; Two-Component System Response Regulator Receiver; Response Regulator; Sensor Protein; EAL/GGDEF Domain-Containing Protein; Sensory Box Histidine Kinase/Response Regulator; Ggdef Domain Protein; Signal Protein; HAMP Domain-Containing Protein; CheY-Like Response Regulator Modulated Diguanylate Cyclase; Signaling Protein; GGDEF Domain/HAMP Domain-Containing Protein; Methyl-Accepting Chemotaxis Sensory Transducer; Eal/Ggdef Domain Protein

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MSSPTNTNAPAKLSLPRLTLIQKIGAGYAAMAFFTMAALVFSTFNIYKSNNTSRQIANNDLPVMSALIELRTSLLAQEGF
AGRYAILHDPAFIELFRQRESEALHNLAVLERSGAQQDAIHLKQLYLSYQGASAKLFSGTPASEIGLRRSARQLLDAVDA
TYIKRKAILHAVLAKANEQQKATIWWTVAISLTGFLLAIGVAPFVTYRIFGAIRKLQSATHRIAAGDFDYDPQIPLGDEI
SDLARDFTKMAARLKVLEQMSLDASPLTRLPGNFAIERELEERLKSGASFAFCYADLGNFKPFGDHYGYAKGSELLRLTG
DLIQAAVKAQAGGAGFVGHVGGDDFVMVVPTDRVKPVCETVIANFSAEVVKHYSQQDLKAGGIEGCDRYGVQRFFPVVTI
SIAAIICGRDQFSSAVDIARAAAKVKDSAKETPGSNYLVGTPGDAA

Sequences:

>Translated_446_residues
MSSPTNTNAPAKLSLPRLTLIQKIGAGYAAMAFFTMAALVFSTFNIYKSNNTSRQIANNDLPVMSALIELRTSLLAQEGF
AGRYAILHDPAFIELFRQRESEALHNLAVLERSGAQQDAIHLKQLYLSYQGASAKLFSGTPASEIGLRRSARQLLDAVDA
TYIKRKAILHAVLAKANEQQKATIWWTVAISLTGFLLAIGVAPFVTYRIFGAIRKLQSATHRIAAGDFDYDPQIPLGDEI
SDLARDFTKMAARLKVLEQMSLDASPLTRLPGNFAIERELEERLKSGASFAFCYADLGNFKPFGDHYGYAKGSELLRLTG
DLIQAAVKAQAGGAGFVGHVGGDDFVMVVPTDRVKPVCETVIANFSAEVVKHYSQQDLKAGGIEGCDRYGVQRFFPVVTI
SIAAIICGRDQFSSAVDIARAAAKVKDSAKETPGSNYLVGTPGDAA
>Mature_445_residues
SSPTNTNAPAKLSLPRLTLIQKIGAGYAAMAFFTMAALVFSTFNIYKSNNTSRQIANNDLPVMSALIELRTSLLAQEGFA
GRYAILHDPAFIELFRQRESEALHNLAVLERSGAQQDAIHLKQLYLSYQGASAKLFSGTPASEIGLRRSARQLLDAVDAT
YIKRKAILHAVLAKANEQQKATIWWTVAISLTGFLLAIGVAPFVTYRIFGAIRKLQSATHRIAAGDFDYDPQIPLGDEIS
DLARDFTKMAARLKVLEQMSLDASPLTRLPGNFAIERELEERLKSGASFAFCYADLGNFKPFGDHYGYAKGSELLRLTGD
LIQAAVKAQAGGAGFVGHVGGDDFVMVVPTDRVKPVCETVIANFSAEVVKHYSQQDLKAGGIEGCDRYGVQRFFPVVTIS
IAAIICGRDQFSSAVDIARAAAKVKDSAKETPGSNYLVGTPGDAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48252; Mature: 48121

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS50885 HAMP ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPTNTNAPAKLSLPRLTLIQKIGAGYAAMAFFTMAALVFSTFNIYKSNNTSRQIANND
CCCCCCCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
LPVMSALIELRTSLLAQEGFAGRYAILHDPAFIELFRQRESEALHNLAVLERSGAQQDAI
HHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HLKQLYLSYQGASAKLFSGTPASEIGLRRSARQLLDAVDATYIKRKAILHAVLAKANEQQ
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KATIWWTVAISLTGFLLAIGVAPFVTYRIFGAIRKLQSATHRIAAGDFDYDPQIPLGDEI
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
SDLARDFTKMAARLKVLEQMSLDASPLTRLPGNFAIERELEERLKSGASFAFCYADLGNF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHCCCC
KPFGDHYGYAKGSELLRLTGDLIQAAVKAQAGGAGFVGHVGGDDFVMVVPTDRVKPVCET
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCHHHHHH
VIANFSAEVVKHYSQQDLKAGGIEGCDRYGVQRFFPVVTISIAAIICGRDQFSSAVDIAR
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AAAKVKDSAKETPGSNYLVGTPGDAA
HHHHHHHHHHCCCCCCEEECCCCCCC
>Mature Secondary Structure 
SSPTNTNAPAKLSLPRLTLIQKIGAGYAAMAFFTMAALVFSTFNIYKSNNTSRQIANND
CCCCCCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
LPVMSALIELRTSLLAQEGFAGRYAILHDPAFIELFRQRESEALHNLAVLERSGAQQDAI
HHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HLKQLYLSYQGASAKLFSGTPASEIGLRRSARQLLDAVDATYIKRKAILHAVLAKANEQQ
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KATIWWTVAISLTGFLLAIGVAPFVTYRIFGAIRKLQSATHRIAAGDFDYDPQIPLGDEI
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
SDLARDFTKMAARLKVLEQMSLDASPLTRLPGNFAIERELEERLKSGASFAFCYADLGNF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHCCCC
KPFGDHYGYAKGSELLRLTGDLIQAAVKAQAGGAGFVGHVGGDDFVMVVPTDRVKPVCET
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCHHHHHH
VIANFSAEVVKHYSQQDLKAGGIEGCDRYGVQRFFPVVTISIAAIICGRDQFSSAVDIAR
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AAAKVKDSAKETPGSNYLVGTPGDAA
HHHHHHHHHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA