| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is nuoJ-2 [H]
Identifier: 197116571
GI number: 197116571
Start: 201360
End: 201842
Strand: Reverse
Name: nuoJ-2 [H]
Synonym: Gbem_0171
Alternate gene names: 197116571
Gene position: 201842-201360 (Counterclockwise)
Preceding gene: 197116572
Following gene: 197116570
Centisome position: 4.37
GC content: 63.77
Gene sequence:
>483_bases ATGGAACGGACCATCTTCTACATACTTGCAGCCGTCACCGTGATAGGGACGCTCTGCGCCATCACGGCGCGGCAGGCGGT ACGCGCCATCGTCTACCTGGTGACTTCGTTCTTCGCCCTGGCGCTCATCTTCTACCTTCTGGGCGCCCCCTTCGTCGCCG CACTGGAGGTCATCATCTATGCTGGCGCCATCATGGTGCTTTTCCTGTTCGTCATCATGATGGTCGAAGTAGCCTCCCCC GAGAAGCTCGCGAAGCCGGCGTTTTCCGACTGGTGGCCGGCGCTGGTCCTGGTCTTGGTCGTGGTCGCGTCGCTGACGGT GCTCGTCACCGGGCAGGCGCCGCCGGTACCGGGGGCCGGGGCGCAGACGGTACGCCAATTTTCCCAGGTACTCTTCACCC GGTACGGCGTCGCCATCGAGCTGGTTTCCATGCAGCTCCTCTTCGCGCTGGTCGGCGCCCTTTACCTCGGGAGGCGCAGA TGA
Upstream 100 bases:
>100_bases GGGAATCGGCGTGGTGCAGCCGCGGGGGAGCTCCCCCAGCGAGCAGGAACCTGCCGACCCGCGCAGCCTGCTGCCGTAAG AGAAATACCACCGGAGCGAA
Downstream 100 bases:
>100_bases CAATACCGCTGTACGAAGTGTTGATCCTCGCCTCGATCCTGTTCGCCATGGGGCTTGCCTGCGTCGTGGCTTGGCGCGCC AACGTGATTATGATGCTCAT
Product: NADH dehydrogenase I subunit J
Products: NA
Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J; NUO10 [H]
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MERTIFYILAAVTVIGTLCAITARQAVRAIVYLVTSFFALALIFYLLGAPFVAALEVIIYAGAIMVLFLFVIMMVEVASP EKLAKPAFSDWWPALVLVLVVVASLTVLVTGQAPPVPGAGAQTVRQFSQVLFTRYGVAIELVSMQLLFALVGALYLGRRR
Sequences:
>Translated_160_residues MERTIFYILAAVTVIGTLCAITARQAVRAIVYLVTSFFALALIFYLLGAPFVAALEVIIYAGAIMVLFLFVIMMVEVASP EKLAKPAFSDWWPALVLVLVVVASLTVLVTGQAPPVPGAGAQTVRQFSQVLFTRYGVAIELVSMQLLFALVGALYLGRRR >Mature_160_residues MERTIFYILAAVTVIGTLCAITARQAVRAIVYLVTSFFALALIFYLLGAPFVAALEVIIYAGAIMVLFLFVIMMVEVASP EKLAKPAFSDWWPALVLVLVVVASLTVLVTGQAPPVPGAGAQTVRQFSQVLFTRYGVAIELVSMQLLFALVGALYLGRRR
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG0839
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 6 family [H]
Homologues:
Organism=Escherichia coli, GI1788616, Length=167, Percent_Identity=37.7245508982036, Blast_Score=86, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001457 [H]
Pfam domain/function: PF00499 Oxidored_q3 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 17341; Mature: 17341
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERTIFYILAAVTVIGTLCAITARQAVRAIVYLVTSFFALALIFYLLGAPFVAALEVIIY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AGAIMVLFLFVIMMVEVASPEKLAKPAFSDWWPALVLVLVVVASLTVLVTGQAPPVPGAG HHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AQTVRQFSQVLFTRYGVAIELVSMQLLFALVGALYLGRRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MERTIFYILAAVTVIGTLCAITARQAVRAIVYLVTSFFALALIFYLLGAPFVAALEVIIY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AGAIMVLFLFVIMMVEVASPEKLAKPAFSDWWPALVLVLVVVASLTVLVTGQAPPVPGAG HHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AQTVRQFSQVLFTRYGVAIELVSMQLLFALVGALYLGRRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]