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The map label for this gene is ccoN [H]

Identifier: 197116521

GI number: 197116521

Start: 143345

End: 144736

Strand: Reverse

Name: ccoN [H]

Synonym: Gbem_0121

Alternate gene names: 197116521

Gene position: 144736-143345 (Counterclockwise)

Preceding gene: 197116522

Following gene: 197116520

Centisome position: 3.14

GC content: 65.59

Gene sequence:

>1392_bases
ATGTTCAAATTCGCATCCAAACCGCAAAGCGCAGCTCTCGCCTTCATGGTGGCCGGTTCGGTCTGGTTCGTCGTCGGCGC
CGTCTACGGCTTCATGTCCGCCATACACCTGGTCGCCCCCGAGTTCCTGCCGCACGTGGGCGCGCTGGTCTTCGGGCGCG
AGCGGCCGGTCCACGTCAACACCATGCTCTACGGCTTCGTCGGGCCCATGCTGGTGGGGAGCGGCCTGTACTACCTCCCG
GCCCTGTTGCGGACCCGGCTTTGGTCCGAGCCGCTCGCCTGGGCCGCCTTCTTCTTCTGGAACCTGACCGTCCTGAGCGG
CCCCGTGGGGTTCGCCTTCGGGATCACCCAGGGGCGCGAGTACAACGAGTACGTCTGGCTCGCCGACGTCTCGCTGGTGA
TCGCCGTGGTCTGCCTCATCGTCAACAGCGCGCTCACCATCGCCAACCGCCAGGAAGATCAGATCTACGTCTCGATCTGG
TACTTCATGGCCACCTTCCTCTGGACCGCCAGCAACTACCCTCTGGGGAACGTGATGTGGCACCCGGCGACCGGGGCCAT
GCCGGGGCTGATCGACTCCATCTTCCTCTGGTTCTGGGGGCACAACCTCCCCGGGCTCCTGATCACCCCGCTTGCCACCG
GGGCCGCCTACTTCGTCATTCCCCGGGTGGCGAGGACCCCGCTCAACTCGCACACCCTGTCGCTATTGGGCTTCTGGCTC
TTGATCGCGCTCTACTCGCACATTGGGGGGCACCACGTGCTGCAGTCCCCCATCCCCAACTGGCTTAAGACCGTCTCCGT
TGTGGACTCCATCGCCATGGTCCTCCCCGTCTCCATCGTCGTCATCAACCTCTGGATGACGGCCCGCAACTTCGGGCGGC
GCATCTGGGGAGACCCGGCGGCCAGGCTCGTCATGGGGGGTGTCGTCTGGTACATCGTCACCTGCATCCAGGGGCCCTTG
CAGTCGCTCCCCTTCCTGCAGCGGGTGACCCACTTCAACAACTGGACCGTAGGGCACGCCCACATCGCCATGCTCGGCTT
CGGCGGCTACATAGCTCTCGGGGCGATGTGGCACATCGTCCCCCTCATCACCGGGCGCGAGCTCTACTCGAAGAAGCTGG
TCTCGCTGCAGTTCGGCCTGGTCACCTTCGGCCTCACCGGGTTTTTCCTGGTGCTGACCGCGGCGGGGCTGGTGCAGGGG
ACCGCCTGGCACAACGGGGAGACCGTGCTCCGGGTGCTACCCCAACTGGTCCCCTTCATGGCGTCGCGCGCAGCCCTCGG
GGTCTTCATTTTCACCGCCTCGCTGGTCGGGCTCTACAACCTGCTCATGTCCTTACGCCGCGGCGAGGAGCAAGAGGGGG
CGCAGCTTCAGCGCGCGGAGGATGCGGCATGA

Upstream 100 bases:

>100_bases
GGGTTTCTGCATCCAGTGCCACCGCTACAACCGCGCGACGCACGACTGCTTCACTTGCCACAGGTAGTCCCATCTCGGGA
AGAGAGGAGCCAGGCAAAGC

Downstream 100 bases:

>100_bases
AGATGACCCCTGCCGTCCTCATCGTCGGTGCGCTGATGGTCTTCTGGGCCTCCGCCTTCATCATCGTCGGGATACCTTCC
CTCACCATGAAGGAAACCCC

Product: cytochrome cbb3 oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MFKFASKPQSAALAFMVAGSVWFVVGAVYGFMSAIHLVAPEFLPHVGALVFGRERPVHVNTMLYGFVGPMLVGSGLYYLP
ALLRTRLWSEPLAWAAFFFWNLTVLSGPVGFAFGITQGREYNEYVWLADVSLVIAVVCLIVNSALTIANRQEDQIYVSIW
YFMATFLWTASNYPLGNVMWHPATGAMPGLIDSIFLWFWGHNLPGLLITPLATGAAYFVIPRVARTPLNSHTLSLLGFWL
LIALYSHIGGHHVLQSPIPNWLKTVSVVDSIAMVLPVSIVVINLWMTARNFGRRIWGDPAARLVMGGVVWYIVTCIQGPL
QSLPFLQRVTHFNNWTVGHAHIAMLGFGGYIALGAMWHIVPLITGRELYSKKLVSLQFGLVTFGLTGFFLVLTAAGLVQG
TAWHNGETVLRVLPQLVPFMASRAALGVFIFTASLVGLYNLLMSLRRGEEQEGAQLQRAEDAA

Sequences:

>Translated_463_residues
MFKFASKPQSAALAFMVAGSVWFVVGAVYGFMSAIHLVAPEFLPHVGALVFGRERPVHVNTMLYGFVGPMLVGSGLYYLP
ALLRTRLWSEPLAWAAFFFWNLTVLSGPVGFAFGITQGREYNEYVWLADVSLVIAVVCLIVNSALTIANRQEDQIYVSIW
YFMATFLWTASNYPLGNVMWHPATGAMPGLIDSIFLWFWGHNLPGLLITPLATGAAYFVIPRVARTPLNSHTLSLLGFWL
LIALYSHIGGHHVLQSPIPNWLKTVSVVDSIAMVLPVSIVVINLWMTARNFGRRIWGDPAARLVMGGVVWYIVTCIQGPL
QSLPFLQRVTHFNNWTVGHAHIAMLGFGGYIALGAMWHIVPLITGRELYSKKLVSLQFGLVTFGLTGFFLVLTAAGLVQG
TAWHNGETVLRVLPQLVPFMASRAALGVFIFTASLVGLYNLLMSLRRGEEQEGAQLQRAEDAA
>Mature_463_residues
MFKFASKPQSAALAFMVAGSVWFVVGAVYGFMSAIHLVAPEFLPHVGALVFGRERPVHVNTMLYGFVGPMLVGSGLYYLP
ALLRTRLWSEPLAWAAFFFWNLTVLSGPVGFAFGITQGREYNEYVWLADVSLVIAVVCLIVNSALTIANRQEDQIYVSIW
YFMATFLWTASNYPLGNVMWHPATGAMPGLIDSIFLWFWGHNLPGLLITPLATGAAYFVIPRVARTPLNSHTLSLLGFWL
LIALYSHIGGHHVLQSPIPNWLKTVSVVDSIAMVLPVSIVVINLWMTARNFGRRIWGDPAARLVMGGVVWYIVTCIQGPL
QSLPFLQRVTHFNNWTVGHAHIAMLGFGGYIALGAMWHIVPLITGRELYSKKLVSLQFGLVTFGLTGFFLVLTAAGLVQG
TAWHNGETVLRVLPQLVPFMASRAALGVFIFTASLVGLYNLLMSLRRGEEQEGAQLQRAEDAA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 51056; Mature: 51056

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS50855 COX1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKFASKPQSAALAFMVAGSVWFVVGAVYGFMSAIHLVAPEFLPHVGALVFGRERPVHVN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHH
TMLYGFVGPMLVGSGLYYLPALLRTRLWSEPLAWAAFFFWNLTVLSGPVGFAFGITQGRE
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCC
YNEYVWLADVSLVIAVVCLIVNSALTIANRQEDQIYVSIWYFMATFLWTASNYPLGNVMW
CCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEEE
HPATGAMPGLIDSIFLWFWGHNLPGLLITPLATGAAYFVIPRVARTPLNSHTLSLLGFWL
CCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHCCCHHHEEHHHHHCCCCHHHHHHHHHHH
LIALYSHIGGHHVLQSPIPNWLKTVSVVDSIAMVLPVSIVVINLWMTARNFGRRIWGDPA
HHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHH
ARLVMGGVVWYIVTCIQGPLQSLPFLQRVTHFNNWTVGHAHIAMLGFGGYIALGAMWHIV
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
PLITGRELYSKKLVSLQFGLVTFGLTGFFLVLTAAGLVQGTAWHNGETVLRVLPQLVPFM
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ASRAALGVFIFTASLVGLYNLLMSLRRGEEQEGAQLQRAEDAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MFKFASKPQSAALAFMVAGSVWFVVGAVYGFMSAIHLVAPEFLPHVGALVFGRERPVHVN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHH
TMLYGFVGPMLVGSGLYYLPALLRTRLWSEPLAWAAFFFWNLTVLSGPVGFAFGITQGRE
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCC
YNEYVWLADVSLVIAVVCLIVNSALTIANRQEDQIYVSIWYFMATFLWTASNYPLGNVMW
CCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEEE
HPATGAMPGLIDSIFLWFWGHNLPGLLITPLATGAAYFVIPRVARTPLNSHTLSLLGFWL
CCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHCCCHHHEEHHHHHCCCCHHHHHHHHHHH
LIALYSHIGGHHVLQSPIPNWLKTVSVVDSIAMVLPVSIVVINLWMTARNFGRRIWGDPA
HHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHH
ARLVMGGVVWYIVTCIQGPLQSLPFLQRVTHFNNWTVGHAHIAMLGFGGYIALGAMWHIV
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
PLITGRELYSKKLVSLQFGLVTFGLTGFFLVLTAAGLVQGTAWHNGETVLRVLPQLVPFM
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ASRAALGVFIFTASLVGLYNLLMSLRRGEEQEGAQLQRAEDAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8386371; 12597275 [H]