Click here to switch to the map view.

The map label for this gene is ccoP

Identifier: 197116520

GI number: 197116520

Start: 142329

End: 143348

Strand: Reverse

Name: ccoP

Synonym: Gbem_0120

Alternate gene names: NA

Gene position: 143348-142329 (Counterclockwise)

Preceding gene: 197116521

Following gene: 197116519

Centisome position: 3.11

GC content: 64.51

Gene sequence:

>1020_bases
ATGAAGATGACCCCTGCCGTCCTCATCGTCGGTGCGCTGATGGTCTTCTGGGCCTCCGCCTTCATCATCGTCGGGATACC
TTCCCTCACCATGAAGGAAACCCCTTCCGAGATCTGGCGCCCGCTCACCCCGCTGGAAAAGGCCGGCCACAGGCTCTACG
TCAAAAACGGCTGCAGCTACTGCCATTCCCTCTTCATCAGGGTGAACGACTGGGACATAGGCGCCGAGCGGATCGCCAAG
GCGGGCGACTATGTCGGCGTCGAGCCCGCCATCCTTGGCTCAGAGAGAACCGGCCCGGACCTCTCGCAGGAGGGGGGGGA
GCACAGCGACGACTGGAACATCGCCCATTTCACCAACCCCCGCTTCACCAGTCCCATTTCGCTCATGCCCTCGTGGGATT
TTCTGACCGAGGGCGAGATAACGGCCTTGACCGCCTACGTCCAATCGCAGGGGGGAAAGCATGCGGACCTGCGCCAGGCG
CGGCAGAGGGAGTGGAAAAAGCAGGCGGTGGAGGCCTACAGCGGCGGGTTCGACCGCAACATCGAGTGGCTGCACGCGCA
GGTCCCCGAGGTCTGGCGACGCATGCCTAACCCCTACCCGGCAACGGAAGCCGCGCTGCAGCGGGGGAAGCGGATCTACC
AGCAGCTCTGCGTCAACTGCCACTCGCCGGTCGGCGACGGCAACGGCCCGGCGATGCCCTTTCTGAGCCCGCCGCCGCTG
AACTTCACCACCCTGCGCCGGCACGTGGTCGAGAACAGGTACATCGGGGGGATCTTCTACTACCAGATCATGAACGGGAT
TACCGGGACCGCCATGCCCTACTTCAAGAAGCACCTGGAGAGCGAGAAGATCTGGGATCTGGCGAACTATTTGGGCGTCT
CCTTCGTGGGGTACACCGACGCCAACACCGAACCCCGCGGCATCGACGCCTCCTTCGAGGGGGCGTGGGAGAACAGCTAT
CCCCCTCCGGGAAGGGAACGGCCGGAACTGCCCGTGGCGCCTCCGGCGCCGGTGCCGTGA

Upstream 100 bases:

>100_bases
TTTTCACCGCCTCGCTGGTCGGGCTCTACAACCTGCTCATGTCCTTACGCCGCGGCGAGGAGCAAGAGGGGGCGCAGCTT
CAGCGCGCGGAGGATGCGGC

Downstream 100 bases:

>100_bases
TTGCGGGGGAGCCCGATTGTGAAATCACCGCAAGTCTTCTCTCCGTGAAGGGCGAGAGATCGAAGCCCCCCCTCCCGCAA
GGGGAGGGGGAAACCTTGGG

Product: cytochrome cbb3 oxidase diheme subunit

Products: ferricytochrome c; H2O

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit II; Cytochrome C Oxidase Mono-Heme Subunit/FixO; Cytochrome C Oxidase Cbb3-Type Subunit I; Cb-Type Cytochrome C Oxidase Subunit II; Cbb3-Type Cytochrome Oxidase Cytochrome C Subunit; Bifunctional Cbb3-Type Cytochrome C Oxidase Subunit I/II; Cytochrome C Oxidase; Cytochrome C Oxidase Subunit CcoO; Cytochrome Oxidase Subunit; Cytochrome C Oxidase Subunit; Cytochrome-C Oxidase Subunit II; Bifunctional Cytochrome C Oxidase Subunit SccoN/O; Cytochrome-Cbb3 Oxidase Subunit I; Transmembrane Cytochrome C Oxidase FixO Protein; Cbb3-Type Cytochrome Oxidase; Cbb3-Type Cytochrome C Oxidase Subunit CcoO; Cbb3-Type Cytochrome C Oxidase Subunit I + II; High-Affinity Fe2+/Pb2+ Permease; Cytochrome Oxidase; Cytochrome C Oxidase Mono-Heme Subunit; Cytochrome C Oxidase Cbb3-Type; Cytochrome C Oxidase Cbb3-Type Mono-Heme Subunit II; Cytochrome Cbb3 Oxidase Subunit I/III; Cytochrome Oxidase Cytochrome C Subunit; Cytochrome C Oxidase Family Protein; Cytochrome C Oxidase Subunit CcoN; Cytochrome C Oxidase Cbb3-Type Subunit I/Mono-Heme Subunit; Cytochrome C Oxidase FixO Chain; Cytochrome C Oxidase Mono-Heme Subunit/FixO Superfamily; Cytochrome-C Oxidase FixO Chain; Cytochrome C Oxidase Mono-Heme Subunit/Fixo; Cytochrome-Cbb3 Oxidase Subunit II; Cytochrome C Oxidase CcoO Subunit; Cytochrome Cbb3 Oxidase Diheme Subunit; Cbb3-Type Cytochrome C Oxidase Subunits CcoN/CcoO; Cytochrome C Oxidase Cbb3-Type Subunit I And II

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MKMTPAVLIVGALMVFWASAFIIVGIPSLTMKETPSEIWRPLTPLEKAGHRLYVKNGCSYCHSLFIRVNDWDIGAERIAK
AGDYVGVEPAILGSERTGPDLSQEGGEHSDDWNIAHFTNPRFTSPISLMPSWDFLTEGEITALTAYVQSQGGKHADLRQA
RQREWKKQAVEAYSGGFDRNIEWLHAQVPEVWRRMPNPYPATEAALQRGKRIYQQLCVNCHSPVGDGNGPAMPFLSPPPL
NFTTLRRHVVENRYIGGIFYYQIMNGITGTAMPYFKKHLESEKIWDLANYLGVSFVGYTDANTEPRGIDASFEGAWENSY
PPPGRERPELPVAPPAPVP

Sequences:

>Translated_339_residues
MKMTPAVLIVGALMVFWASAFIIVGIPSLTMKETPSEIWRPLTPLEKAGHRLYVKNGCSYCHSLFIRVNDWDIGAERIAK
AGDYVGVEPAILGSERTGPDLSQEGGEHSDDWNIAHFTNPRFTSPISLMPSWDFLTEGEITALTAYVQSQGGKHADLRQA
RQREWKKQAVEAYSGGFDRNIEWLHAQVPEVWRRMPNPYPATEAALQRGKRIYQQLCVNCHSPVGDGNGPAMPFLSPPPL
NFTTLRRHVVENRYIGGIFYYQIMNGITGTAMPYFKKHLESEKIWDLANYLGVSFVGYTDANTEPRGIDASFEGAWENSY
PPPGRERPELPVAPPAPVP
>Mature_339_residues
MKMTPAVLIVGALMVFWASAFIIVGIPSLTMKETPSEIWRPLTPLEKAGHRLYVKNGCSYCHSLFIRVNDWDIGAERIAK
AGDYVGVEPAILGSERTGPDLSQEGGEHSDDWNIAHFTNPRFTSPISLMPSWDFLTEGEITALTAYVQSQGGKHADLRQA
RQREWKKQAVEAYSGGFDRNIEWLHAQVPEVWRRMPNPYPATEAALQRGKRIYQQLCVNCHSPVGDGNGPAMPFLSPPPL
NFTTLRRHVVENRYIGGIFYYQIMNGITGTAMPYFKKHLESEKIWDLANYLGVSFVGYTDANTEPRGIDASFEGAWENSY
PPPGRERPELPVAPPAPVP

Specific function: Unknown

COG id: COG2993

COG function: function code C; Cbb3-type cytochrome oxidase, cytochrome c subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 37917; Mature: 37917

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTPAVLIVGALMVFWASAFIIVGIPSLTMKETPSEIWRPLTPLEKAGHRLYVKNGCSY
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHCCCCCHHHCCCEEEEHHHHHH
CHSLFIRVNDWDIGAERIAKAGDYVGVEPAILGSERTGPDLSQEGGEHSDDWNIAHFTNP
HHHEEEEECCCCCCHHHHHHCCCCCCCCCCEECCCCCCCCHHHCCCCCCCCCCEEEECCC
RFTSPISLMPSWDFLTEGEITALTAYVQSQGGKHADLRQARQREWKKQAVEAYSGGFDRN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
IEWLHAQVPEVWRRMPNPYPATEAALQRGKRIYQQLCVNCHSPVGDGNGPAMPFLSPPPL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
NFTTLRRHVVENRYIGGIFYYQIMNGITGTAMPYFKKHLESEKIWDLANYLGVSFVGYTD
CHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCEEEEECC
ANTEPRGIDASFEGAWENSYPPPGRERPELPVAPPAPVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKMTPAVLIVGALMVFWASAFIIVGIPSLTMKETPSEIWRPLTPLEKAGHRLYVKNGCSY
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHCCCCCHHHCCCEEEEHHHHHH
CHSLFIRVNDWDIGAERIAKAGDYVGVEPAILGSERTGPDLSQEGGEHSDDWNIAHFTNP
HHHEEEEECCCCCCHHHHHHCCCCCCCCCCEECCCCCCCCHHHCCCCCCCCCCEEEECCC
RFTSPISLMPSWDFLTEGEITALTAYVQSQGGKHADLRQARQREWKKQAVEAYSGGFDRN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
IEWLHAQVPEVWRRMPNPYPATEAALQRGKRIYQQLCVNCHSPVGDGNGPAMPFLSPPPL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
NFTTLRRHVVENRYIGGIFYYQIMNGITGTAMPYFKKHLESEKIWDLANYLGVSFVGYTD
CHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCEEEEECC
ANTEPRGIDASFEGAWENSYPPPGRERPELPVAPPAPVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA