Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116459

Identifier: 197116459

GI number: 197116459

Start: 71047

End: 71454

Strand: Reverse

Name: 197116459

Synonym: Gbem_0059

Alternate gene names: NA

Gene position: 71454-71047 (Counterclockwise)

Preceding gene: 197116460

Following gene: 197116458

Centisome position: 1.55

GC content: 57.11

Gene sequence:

>408_bases
ATGCCAGTCAGCGCGATCCAACAAAGAAACAACGACTTTCGAAGCCCCGAGGGGCGTTCGGCTTTGGCGAAGATGGTGAT
TAAACTCTTCGGGCTTTGGGAGCTCACGACGGCCGATCAGCTTGAACTGCTCGGGTTGAGCGCAAAGAGCCGTTCCCTTC
TGTCCCGGTACGCTAAAGGTGACGCTCTGCCGGAAGGACGCGATACTCTGGATCGCGTGGGGTGGCTCTTGGCGATTCAT
AAAGCACTCCGGCTCTTGTACCCCCAAAACCCGGAGATCCGTTACTCCTGGGTAAATCGCCGCAACGAAGCCTTTGGCAA
TCTGCGCCCACTGGATGTGATGAAGGAGCAGGGAATCATCGGCTTGGCCCGTGTCTCTCGCTACCTCGACTACTACAGGG
GGCTTTAG

Upstream 100 bases:

>100_bases
CACGCACTCCCGTGCGCACGGCCTTGGCTTTTCACACTTTGGTGTTGCATAGTAAACATTTCATGTTTATTATTATTCAC
AAGAGAGGGGGGGCCAAAAC

Downstream 100 bases:

>100_bases
TGAAGGTTCTGTTCGATAAGGTCAGGGATTTTGACGATGATGTGTTCAGGAATATCGTCTCCCTGCGTGAATCGCAGGAT
CTATTTGACGACCTGACAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MPVSAIQQRNNDFRSPEGRSALAKMVIKLFGLWELTTADQLELLGLSAKSRSLLSRYAKGDALPEGRDTLDRVGWLLAIH
KALRLLYPQNPEIRYSWVNRRNEAFGNLRPLDVMKEQGIIGLARVSRYLDYYRGL

Sequences:

>Translated_135_residues
MPVSAIQQRNNDFRSPEGRSALAKMVIKLFGLWELTTADQLELLGLSAKSRSLLSRYAKGDALPEGRDTLDRVGWLLAIH
KALRLLYPQNPEIRYSWVNRRNEAFGNLRPLDVMKEQGIIGLARVSRYLDYYRGL
>Mature_134_residues
PVSAIQQRNNDFRSPEGRSALAKMVIKLFGLWELTTADQLELLGLSAKSRSLLSRYAKGDALPEGRDTLDRVGWLLAIHK
ALRLLYPQNPEIRYSWVNRRNEAFGNLRPLDVMKEQGIIGLARVSRYLDYYRGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15460; Mature: 15329

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSAIQQRNNDFRSPEGRSALAKMVIKLFGLWELTTADQLELLGLSAKSRSLLSRYAKG
CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHCC
DALPEGRDTLDRVGWLLAIHKALRLLYPQNPEIRYSWVNRRNEAFGNLRPLDVMKEQGII
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHCCCH
GLARVSRYLDYYRGL
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
PVSAIQQRNNDFRSPEGRSALAKMVIKLFGLWELTTADQLELLGLSAKSRSLLSRYAKG
CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHCC
DALPEGRDTLDRVGWLLAIHKALRLLYPQNPEIRYSWVNRRNEAFGNLRPLDVMKEQGII
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHCCCH
GLARVSRYLDYYRGL
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA