| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116458
Identifier: 197116458
GI number: 197116458
Start: 70364
End: 71047
Strand: Reverse
Name: 197116458
Synonym: Gbem_0058
Alternate gene names: NA
Gene position: 71047-70364 (Counterclockwise)
Preceding gene: 197116459
Following gene: 197116454
Centisome position: 1.54
GC content: 51.75
Gene sequence:
>684_bases GTGAAGGTTCTGTTCGATAAGGTCAGGGATTTTGACGATGATGTGTTCAGGAATATCGTCTCCCTGCGTGAATCGCAGGA TCTATTTGACGACCTGACAGTTGATGAGGGAGCGACTCAATACGCGATCGACGCTGAGGCCCAGGTCAAGTCAAGCCTCC CCTCCGGGGTCATCGAAAGAGGATTCGACTACACCACTGCCATTGATTACCCATTCACCAATGAGCCATACCTTTTGTCC CGATATGGCAATGGATCCTTCGGGGTCTGGTACGGCGCCTTGGATCTCGAAACGACACTGTATGAAACGCTTTACCATAC CGTGAGGGAAGAATCGAAGATAGAAGGTATCAGCGGTATTTTGAAGAGGGAAAGGGCCGTCTATCTGGTGAGGACACGTG CGATCCTCATTGACTTGGTGGGGAAGGAAAATAGATATCCGGAACTTATTTCCGACAGCTACGCTCTCACCCAGCAGATC GCCGAACGAGTTCACAAAGAGCACCCCGGCCTGCTGGCACCATCCGCCCGATACTCGGGCACCAACCTCATCGCCTTTAC CCCAAAGATACTGAGCAATCCCAGAGTGAACTGCTACCTGACCTACACCTATGACTATCAGAAGAAAAGCGTTGTAGTTG AGCGACGACCTGGCGAGGTGATCCTCGAACGGTCATTTGCCTGA
Upstream 100 bases:
>100_bases AAGCCTTTGGCAATCTGCGCCCACTGGATGTGATGAAGGAGCAGGGAATCATCGGCTTGGCCCGTGTCTCTCGCTACCTC GACTACTACAGGGGGCTTTA
Downstream 100 bases:
>100_bases CTCATCGAGCGACGGCCAGAAAACAATCAGGGAGGCTAAAGAAAAAGTGCCAGCTGCGGCAATCGCAACTGGCACTTCTG TTTTCATACTAACTGACTCT
Product: RES domain-containing protein
Products: NA
Alternate protein names: RES Domain-Containing Protein
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKVLFDKVRDFDDDVFRNIVSLRESQDLFDDLTVDEGATQYAIDAEAQVKSSLPSGVIERGFDYTTAIDYPFTNEPYLLS RYGNGSFGVWYGALDLETTLYETLYHTVREESKIEGISGILKRERAVYLVRTRAILIDLVGKENRYPELISDSYALTQQI AERVHKEHPGLLAPSARYSGTNLIAFTPKILSNPRVNCYLTYTYDYQKKSVVVERRPGEVILERSFA
Sequences:
>Translated_227_residues MKVLFDKVRDFDDDVFRNIVSLRESQDLFDDLTVDEGATQYAIDAEAQVKSSLPSGVIERGFDYTTAIDYPFTNEPYLLS RYGNGSFGVWYGALDLETTLYETLYHTVREESKIEGISGILKRERAVYLVRTRAILIDLVGKENRYPELISDSYALTQQI AERVHKEHPGLLAPSARYSGTNLIAFTPKILSNPRVNCYLTYTYDYQKKSVVVERRPGEVILERSFA >Mature_227_residues MKVLFDKVRDFDDDVFRNIVSLRESQDLFDDLTVDEGATQYAIDAEAQVKSSLPSGVIERGFDYTTAIDYPFTNEPYLLS RYGNGSFGVWYGALDLETTLYETLYHTVREESKIEGISGILKRERAVYLVRTRAILIDLVGKENRYPELISDSYALTQQI AERVHKEHPGLLAPSARYSGTNLIAFTPKILSNPRVNCYLTYTYDYQKKSVVVERRPGEVILERSFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25948; Mature: 25948
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLFDKVRDFDDDVFRNIVSLRESQDLFDDLTVDEGATQYAIDAEAQVKSSLPSGVIER CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHCCCHHHHHC GFDYTTAIDYPFTNEPYLLSRYGNGSFGVWYGALDLETTLYETLYHTVREESKIEGISGI CCCEEEEECCCCCCCCEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LKRERAVYLVRTRAILIDLVGKENRYPELISDSYALTQQIAERVHKEHPGLLAPSARYSG HHHHHEEEEEEHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TNLIAFTPKILSNPRVNCYLTYTYDYQKKSVVVERRPGEVILERSFA CEEEEECHHHHCCCCEEEEEEEEEECCCCEEEEEECCCCEEEEECCC >Mature Secondary Structure MKVLFDKVRDFDDDVFRNIVSLRESQDLFDDLTVDEGATQYAIDAEAQVKSSLPSGVIER CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHCCCHHHHHC GFDYTTAIDYPFTNEPYLLSRYGNGSFGVWYGALDLETTLYETLYHTVREESKIEGISGI CCCEEEEECCCCCCCCEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LKRERAVYLVRTRAILIDLVGKENRYPELISDSYALTQQIAERVHKEHPGLLAPSARYSG HHHHHEEEEEEHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TNLIAFTPKILSNPRVNCYLTYTYDYQKKSVVVERRPGEVILERSFA CEEEEECHHHHCCCCEEEEEEEEEECCCCEEEEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA