Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116436

Identifier: 197116436

GI number: 197116436

Start: 45505

End: 47454

Strand: Reverse

Name: 197116436

Synonym: Gbem_0036

Alternate gene names: NA

Gene position: 47454-45505 (Counterclockwise)

Preceding gene: 197116437

Following gene: 197116432

Centisome position: 1.03

GC content: 63.95

Gene sequence:

>1950_bases
ATGCCCGAACGCTTGCATCTCGAAAATTTCGGCAACGTCCACGCCCTCCCCATCCTGCACTACCGGATGGAGTTCGCCCA
CCTGGTGCGGGAGGCGTATGAGGTTCTGAAACCGGACTGCATCGCCATCGAGCTCCCCAGGACCCTGGAACCGCAGTTCC
TGCGCGCCGTCGCGCGCCTCCCCGAGATTTCCGTCCTCGCCTACCACGTCGCCGGCCAATCCGCCTTTCTCCTCGTCGAA
CCCGCCGACCCTCTCATCGAGGGGGCGCGGCTCGCGCTCAAGCACCGCATCCCGCTGCACCTGGTCGACATCGACCTGGA
CAGCTACCCGTCCCACGACGAGCAGCTTCCCGACTCCTACGCGGTGCAGCGCATCGGGCTGGAACCGTTCTACCGGGAGG
TGGAAAAGCTGTACCGCGACCTGGAGCCTTGCGAGGAGGACCTGCGCCGCGAGCTCGGCATGGCCCACAGGCTGCAGCAG
CTCTCGGCGCAGCACCAAAGGGTTCTTTTCATCTGCGGCATGTCGCACCTGGTGCGGATCCGGGAAAACTTCGGGCGGCC
TCTGGCGCAGCCTCTTACCCGCACCCACCGCGAAGGGATCGCCATCTTCAACCTGCACCCGGAATGCTGCCACGAGGTCC
TGGCCGAATATCCCTTTCTTTCCTCCCTCTACGAAACCAGGCGATCGCCGCTCCCCCCCGAACCCGCGCAGGCGGCCTCC
TTGCGTAAAAGCTTCAACGCCTTCGAGCTGATCCTGGGAGGGAAGCAGTCGATCCCCGAGGAGCAGGCGCTCTTGGAGTC
GATCCAGCGCAGCGCCCACCGCATAGGGGACGAAGGGGAGATGCCGGACCGCCAGAAGATCATGCTGCGGCTCTTCCTGG
AGGCGGCGCGCCACTACCGCCAGGAGACCGGGGACAAGGTCCACTACTGGCAGAAGCGGGCCTTCTTCCGTTTCGCCAGG
AACTACGCACTCCTGTCGCAGATGCTCCTTCCCGACCTGTACCAGATGCTCGCCGCCGCCCGGGGGTGCCTCGACGACAA
CTTCGCCTACGCCTTCTTCCGGCTGGCCGCGCACTACCCCTGGCAGCGCGAACAAAGCGATATCCCAACCCTGAGGCTTT
CCGCGGCCGAGCTTTCGGCGGGGACCCGCAGGATACGCTTTCGCCCCCGGGAACAGGTACGCGGCAAGGGGCGCTCCGGC
ATCAAGATGACGAACCGGCGCAAGGAAAAGCGCCCCGGCGACTGGCTGGAGGGGTTCGACGACCCGTACATCTGCTCCTA
TCCCCCCGAGGACTTGAGCATCGAGGAATACGGAAGGAACCTGAAGCGGATCGGGGCGCGGCAGCTGAGCGAGGAGGCGA
GCCGGACCGAACCTTTCTCGGCGTCCCTTCTGGACGGGATCGACATGCGCGAGACCATCAGGAACCTGCACGAAGGGAAG
ATCTACGTAAAGGAGAACAAGCGGTTAAAGAGCGGGGTAGGGTGCGTGGTGGTGGTCTTCGACGAGGACCGGGAGGACGC
AGGGTATCCGTACTGCATGACCTGGCTCGGCGAGCACGAACAGGAATCGGACATGGCTTTTTATGCCACTCCTCCCACGG
ATAATATCGTCGGTCCCGGCATTTCCCGCTGCGAGTACGGCGGGTTCCTGTTAAGCTACCCGCCGCGCCGGATGCACGAC
GTCTGGCAGGACCCGGATTACCGCGGCGCCTTGGGGAAGGGTGAAGTGCTGTTGATGGCGGCGCTGGATTATTCGTTGGA
GAAGGACGTGGTATATGCTGCGGCGAAGCCGCCGAGGAGCTATCTGAAGCAGCAGGCGGCGCGTCTGGGGAAGAGGATCA
TCTATCTGCCGCTGGGGAGCCTCTCGCCGGTGGCGCTCAAAAGGCTCCGGGCGTTTCACATCCTCTACGGCAAGGACAAG
CGGGACATCGCCAAGGACTATATCTGGTAA

Upstream 100 bases:

>100_bases
ATCCGCGTGAGTTGCTGCCGCTTGCGGTGGAGAGGATCCTCGGCGAAGAGGCACTCCGCTACCTCAAGTAACTTCTGGAG
TTTTACCACCAACTATTCCT

Downstream 100 bases:

>100_bases
AACCTTAAAACCATTAACAAGGAGAACGTCTGAGGACTTCTGAGAAAAGCGAGGAGAGAACCTCCAGGTAGTGGTTCTCT
CCCGCCTTGCTCAGATTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 649; Mature: 648

Protein sequence:

>649_residues
MPERLHLENFGNVHALPILHYRMEFAHLVREAYEVLKPDCIAIELPRTLEPQFLRAVARLPEISVLAYHVAGQSAFLLVE
PADPLIEGARLALKHRIPLHLVDIDLDSYPSHDEQLPDSYAVQRIGLEPFYREVEKLYRDLEPCEEDLRRELGMAHRLQQ
LSAQHQRVLFICGMSHLVRIRENFGRPLAQPLTRTHREGIAIFNLHPECCHEVLAEYPFLSSLYETRRSPLPPEPAQAAS
LRKSFNAFELILGGKQSIPEEQALLESIQRSAHRIGDEGEMPDRQKIMLRLFLEAARHYRQETGDKVHYWQKRAFFRFAR
NYALLSQMLLPDLYQMLAAARGCLDDNFAYAFFRLAAHYPWQREQSDIPTLRLSAAELSAGTRRIRFRPREQVRGKGRSG
IKMTNRRKEKRPGDWLEGFDDPYICSYPPEDLSIEEYGRNLKRIGARQLSEEASRTEPFSASLLDGIDMRETIRNLHEGK
IYVKENKRLKSGVGCVVVVFDEDREDAGYPYCMTWLGEHEQESDMAFYATPPTDNIVGPGISRCEYGGFLLSYPPRRMHD
VWQDPDYRGALGKGEVLLMAALDYSLEKDVVYAAAKPPRSYLKQQAARLGKRIIYLPLGSLSPVALKRLRAFHILYGKDK
RDIAKDYIW

Sequences:

>Translated_649_residues
MPERLHLENFGNVHALPILHYRMEFAHLVREAYEVLKPDCIAIELPRTLEPQFLRAVARLPEISVLAYHVAGQSAFLLVE
PADPLIEGARLALKHRIPLHLVDIDLDSYPSHDEQLPDSYAVQRIGLEPFYREVEKLYRDLEPCEEDLRRELGMAHRLQQ
LSAQHQRVLFICGMSHLVRIRENFGRPLAQPLTRTHREGIAIFNLHPECCHEVLAEYPFLSSLYETRRSPLPPEPAQAAS
LRKSFNAFELILGGKQSIPEEQALLESIQRSAHRIGDEGEMPDRQKIMLRLFLEAARHYRQETGDKVHYWQKRAFFRFAR
NYALLSQMLLPDLYQMLAAARGCLDDNFAYAFFRLAAHYPWQREQSDIPTLRLSAAELSAGTRRIRFRPREQVRGKGRSG
IKMTNRRKEKRPGDWLEGFDDPYICSYPPEDLSIEEYGRNLKRIGARQLSEEASRTEPFSASLLDGIDMRETIRNLHEGK
IYVKENKRLKSGVGCVVVVFDEDREDAGYPYCMTWLGEHEQESDMAFYATPPTDNIVGPGISRCEYGGFLLSYPPRRMHD
VWQDPDYRGALGKGEVLLMAALDYSLEKDVVYAAAKPPRSYLKQQAARLGKRIIYLPLGSLSPVALKRLRAFHILYGKDK
RDIAKDYIW
>Mature_648_residues
PERLHLENFGNVHALPILHYRMEFAHLVREAYEVLKPDCIAIELPRTLEPQFLRAVARLPEISVLAYHVAGQSAFLLVEP
ADPLIEGARLALKHRIPLHLVDIDLDSYPSHDEQLPDSYAVQRIGLEPFYREVEKLYRDLEPCEEDLRRELGMAHRLQQL
SAQHQRVLFICGMSHLVRIRENFGRPLAQPLTRTHREGIAIFNLHPECCHEVLAEYPFLSSLYETRRSPLPPEPAQAASL
RKSFNAFELILGGKQSIPEEQALLESIQRSAHRIGDEGEMPDRQKIMLRLFLEAARHYRQETGDKVHYWQKRAFFRFARN
YALLSQMLLPDLYQMLAAARGCLDDNFAYAFFRLAAHYPWQREQSDIPTLRLSAAELSAGTRRIRFRPREQVRGKGRSGI
KMTNRRKEKRPGDWLEGFDDPYICSYPPEDLSIEEYGRNLKRIGARQLSEEASRTEPFSASLLDGIDMRETIRNLHEGKI
YVKENKRLKSGVGCVVVVFDEDREDAGYPYCMTWLGEHEQESDMAFYATPPTDNIVGPGISRCEYGGFLLSYPPRRMHDV
WQDPDYRGALGKGEVLLMAALDYSLEKDVVYAAAKPPRSYLKQQAARLGKRIIYLPLGSLSPVALKRLRAFHILYGKDKR
DIAKDYIW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74868; Mature: 74737

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERLHLENFGNVHALPILHYRMEFAHLVREAYEVLKPDCIAIELPRTLEPQFLRAVARL
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHC
PEISVLAYHVAGQSAFLLVEPADPLIEGARLALKHRIPLHLVDIDLDSYPSHDEQLPDSY
CCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCHHH
AVQRIGLEPFYREVEKLYRDLEPCEEDLRRELGMAHRLQQLSAQHQRVLFICGMSHLVRI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHH
RENFGRPLAQPLTRTHREGIAIFNLHPECCHEVLAEYPFLSSLYETRRSPLPPEPAQAAS
HHHHCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHH
LRKSFNAFELILGGKQSIPEEQALLESIQRSAHRIGDEGEMPDRQKIMLRLFLEAARHYR
HHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
QETGDKVHYWQKRAFFRFARNYALLSQMLLPDLYQMLAAARGCLDDNFAYAFFRLAAHYP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
WQREQSDIPTLRLSAAELSAGTRRIRFRPREQVRGKGRSGIKMTNRRKEKRPGDWLEGFD
CCCCCCCCCEEEEEHHHHCCCCCEEECCCHHHHCCCCCCCCEEHHHHHHCCCCCHHHCCC
DPYICSYPPEDLSIEEYGRNLKRIGARQLSEEASRTEPFSASLLDGIDMRETIRNLHEGK
CCEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCE
IYVKENKRLKSGVGCVVVVFDEDREDAGYPYCMTWLGEHEQESDMAFYATPPTDNIVGPG
EEEECCCHHHCCCCEEEEEECCCCCCCCCCEEEHHCCCCCCCCCEEEEECCCCCCCCCCC
ISRCEYGGFLLSYPPRRMHDVWQDPDYRGALGKGEVLLMAALDYSLEKDVVYAAAKPPRS
CCHHCCCCEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCHHH
YLKQQAARLGKRIIYLPLGSLSPVALKRLRAFHILYGKDKRDIAKDYIW
HHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure 
PERLHLENFGNVHALPILHYRMEFAHLVREAYEVLKPDCIAIELPRTLEPQFLRAVARL
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHC
PEISVLAYHVAGQSAFLLVEPADPLIEGARLALKHRIPLHLVDIDLDSYPSHDEQLPDSY
CCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCHHH
AVQRIGLEPFYREVEKLYRDLEPCEEDLRRELGMAHRLQQLSAQHQRVLFICGMSHLVRI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHH
RENFGRPLAQPLTRTHREGIAIFNLHPECCHEVLAEYPFLSSLYETRRSPLPPEPAQAAS
HHHHCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHH
LRKSFNAFELILGGKQSIPEEQALLESIQRSAHRIGDEGEMPDRQKIMLRLFLEAARHYR
HHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
QETGDKVHYWQKRAFFRFARNYALLSQMLLPDLYQMLAAARGCLDDNFAYAFFRLAAHYP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
WQREQSDIPTLRLSAAELSAGTRRIRFRPREQVRGKGRSGIKMTNRRKEKRPGDWLEGFD
CCCCCCCCCEEEEEHHHHCCCCCEEECCCHHHHCCCCCCCCEEHHHHHHCCCCCHHHCCC
DPYICSYPPEDLSIEEYGRNLKRIGARQLSEEASRTEPFSASLLDGIDMRETIRNLHEGK
CCEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCE
IYVKENKRLKSGVGCVVVVFDEDREDAGYPYCMTWLGEHEQESDMAFYATPPTDNIVGPG
EEEECCCHHHCCCCEEEEEECCCCCCCCCCEEEHHCCCCCCCCCEEEEECCCCCCCCCCC
ISRCEYGGFLLSYPPRRMHDVWQDPDYRGALGKGEVLLMAALDYSLEKDVVYAAAKPPRS
CCHHCCCCEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCHHH
YLKQQAARLGKRIIYLPLGSLSPVALKRLRAFHILYGKDKRDIAKDYIW
HHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA