| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116436
Identifier: 197116436
GI number: 197116436
Start: 45505
End: 47454
Strand: Reverse
Name: 197116436
Synonym: Gbem_0036
Alternate gene names: NA
Gene position: 47454-45505 (Counterclockwise)
Preceding gene: 197116437
Following gene: 197116432
Centisome position: 1.03
GC content: 63.95
Gene sequence:
>1950_bases ATGCCCGAACGCTTGCATCTCGAAAATTTCGGCAACGTCCACGCCCTCCCCATCCTGCACTACCGGATGGAGTTCGCCCA CCTGGTGCGGGAGGCGTATGAGGTTCTGAAACCGGACTGCATCGCCATCGAGCTCCCCAGGACCCTGGAACCGCAGTTCC TGCGCGCCGTCGCGCGCCTCCCCGAGATTTCCGTCCTCGCCTACCACGTCGCCGGCCAATCCGCCTTTCTCCTCGTCGAA CCCGCCGACCCTCTCATCGAGGGGGCGCGGCTCGCGCTCAAGCACCGCATCCCGCTGCACCTGGTCGACATCGACCTGGA CAGCTACCCGTCCCACGACGAGCAGCTTCCCGACTCCTACGCGGTGCAGCGCATCGGGCTGGAACCGTTCTACCGGGAGG TGGAAAAGCTGTACCGCGACCTGGAGCCTTGCGAGGAGGACCTGCGCCGCGAGCTCGGCATGGCCCACAGGCTGCAGCAG CTCTCGGCGCAGCACCAAAGGGTTCTTTTCATCTGCGGCATGTCGCACCTGGTGCGGATCCGGGAAAACTTCGGGCGGCC TCTGGCGCAGCCTCTTACCCGCACCCACCGCGAAGGGATCGCCATCTTCAACCTGCACCCGGAATGCTGCCACGAGGTCC TGGCCGAATATCCCTTTCTTTCCTCCCTCTACGAAACCAGGCGATCGCCGCTCCCCCCCGAACCCGCGCAGGCGGCCTCC TTGCGTAAAAGCTTCAACGCCTTCGAGCTGATCCTGGGAGGGAAGCAGTCGATCCCCGAGGAGCAGGCGCTCTTGGAGTC GATCCAGCGCAGCGCCCACCGCATAGGGGACGAAGGGGAGATGCCGGACCGCCAGAAGATCATGCTGCGGCTCTTCCTGG AGGCGGCGCGCCACTACCGCCAGGAGACCGGGGACAAGGTCCACTACTGGCAGAAGCGGGCCTTCTTCCGTTTCGCCAGG AACTACGCACTCCTGTCGCAGATGCTCCTTCCCGACCTGTACCAGATGCTCGCCGCCGCCCGGGGGTGCCTCGACGACAA CTTCGCCTACGCCTTCTTCCGGCTGGCCGCGCACTACCCCTGGCAGCGCGAACAAAGCGATATCCCAACCCTGAGGCTTT CCGCGGCCGAGCTTTCGGCGGGGACCCGCAGGATACGCTTTCGCCCCCGGGAACAGGTACGCGGCAAGGGGCGCTCCGGC ATCAAGATGACGAACCGGCGCAAGGAAAAGCGCCCCGGCGACTGGCTGGAGGGGTTCGACGACCCGTACATCTGCTCCTA TCCCCCCGAGGACTTGAGCATCGAGGAATACGGAAGGAACCTGAAGCGGATCGGGGCGCGGCAGCTGAGCGAGGAGGCGA GCCGGACCGAACCTTTCTCGGCGTCCCTTCTGGACGGGATCGACATGCGCGAGACCATCAGGAACCTGCACGAAGGGAAG ATCTACGTAAAGGAGAACAAGCGGTTAAAGAGCGGGGTAGGGTGCGTGGTGGTGGTCTTCGACGAGGACCGGGAGGACGC AGGGTATCCGTACTGCATGACCTGGCTCGGCGAGCACGAACAGGAATCGGACATGGCTTTTTATGCCACTCCTCCCACGG ATAATATCGTCGGTCCCGGCATTTCCCGCTGCGAGTACGGCGGGTTCCTGTTAAGCTACCCGCCGCGCCGGATGCACGAC GTCTGGCAGGACCCGGATTACCGCGGCGCCTTGGGGAAGGGTGAAGTGCTGTTGATGGCGGCGCTGGATTATTCGTTGGA GAAGGACGTGGTATATGCTGCGGCGAAGCCGCCGAGGAGCTATCTGAAGCAGCAGGCGGCGCGTCTGGGGAAGAGGATCA TCTATCTGCCGCTGGGGAGCCTCTCGCCGGTGGCGCTCAAAAGGCTCCGGGCGTTTCACATCCTCTACGGCAAGGACAAG CGGGACATCGCCAAGGACTATATCTGGTAA
Upstream 100 bases:
>100_bases ATCCGCGTGAGTTGCTGCCGCTTGCGGTGGAGAGGATCCTCGGCGAAGAGGCACTCCGCTACCTCAAGTAACTTCTGGAG TTTTACCACCAACTATTCCT
Downstream 100 bases:
>100_bases AACCTTAAAACCATTAACAAGGAGAACGTCTGAGGACTTCTGAGAAAAGCGAGGAGAGAACCTCCAGGTAGTGGTTCTCT CCCGCCTTGCTCAGATTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MPERLHLENFGNVHALPILHYRMEFAHLVREAYEVLKPDCIAIELPRTLEPQFLRAVARLPEISVLAYHVAGQSAFLLVE PADPLIEGARLALKHRIPLHLVDIDLDSYPSHDEQLPDSYAVQRIGLEPFYREVEKLYRDLEPCEEDLRRELGMAHRLQQ LSAQHQRVLFICGMSHLVRIRENFGRPLAQPLTRTHREGIAIFNLHPECCHEVLAEYPFLSSLYETRRSPLPPEPAQAAS LRKSFNAFELILGGKQSIPEEQALLESIQRSAHRIGDEGEMPDRQKIMLRLFLEAARHYRQETGDKVHYWQKRAFFRFAR NYALLSQMLLPDLYQMLAAARGCLDDNFAYAFFRLAAHYPWQREQSDIPTLRLSAAELSAGTRRIRFRPREQVRGKGRSG IKMTNRRKEKRPGDWLEGFDDPYICSYPPEDLSIEEYGRNLKRIGARQLSEEASRTEPFSASLLDGIDMRETIRNLHEGK IYVKENKRLKSGVGCVVVVFDEDREDAGYPYCMTWLGEHEQESDMAFYATPPTDNIVGPGISRCEYGGFLLSYPPRRMHD VWQDPDYRGALGKGEVLLMAALDYSLEKDVVYAAAKPPRSYLKQQAARLGKRIIYLPLGSLSPVALKRLRAFHILYGKDK RDIAKDYIW
Sequences:
>Translated_649_residues MPERLHLENFGNVHALPILHYRMEFAHLVREAYEVLKPDCIAIELPRTLEPQFLRAVARLPEISVLAYHVAGQSAFLLVE PADPLIEGARLALKHRIPLHLVDIDLDSYPSHDEQLPDSYAVQRIGLEPFYREVEKLYRDLEPCEEDLRRELGMAHRLQQ LSAQHQRVLFICGMSHLVRIRENFGRPLAQPLTRTHREGIAIFNLHPECCHEVLAEYPFLSSLYETRRSPLPPEPAQAAS LRKSFNAFELILGGKQSIPEEQALLESIQRSAHRIGDEGEMPDRQKIMLRLFLEAARHYRQETGDKVHYWQKRAFFRFAR NYALLSQMLLPDLYQMLAAARGCLDDNFAYAFFRLAAHYPWQREQSDIPTLRLSAAELSAGTRRIRFRPREQVRGKGRSG IKMTNRRKEKRPGDWLEGFDDPYICSYPPEDLSIEEYGRNLKRIGARQLSEEASRTEPFSASLLDGIDMRETIRNLHEGK IYVKENKRLKSGVGCVVVVFDEDREDAGYPYCMTWLGEHEQESDMAFYATPPTDNIVGPGISRCEYGGFLLSYPPRRMHD VWQDPDYRGALGKGEVLLMAALDYSLEKDVVYAAAKPPRSYLKQQAARLGKRIIYLPLGSLSPVALKRLRAFHILYGKDK RDIAKDYIW >Mature_648_residues PERLHLENFGNVHALPILHYRMEFAHLVREAYEVLKPDCIAIELPRTLEPQFLRAVARLPEISVLAYHVAGQSAFLLVEP ADPLIEGARLALKHRIPLHLVDIDLDSYPSHDEQLPDSYAVQRIGLEPFYREVEKLYRDLEPCEEDLRRELGMAHRLQQL SAQHQRVLFICGMSHLVRIRENFGRPLAQPLTRTHREGIAIFNLHPECCHEVLAEYPFLSSLYETRRSPLPPEPAQAASL RKSFNAFELILGGKQSIPEEQALLESIQRSAHRIGDEGEMPDRQKIMLRLFLEAARHYRQETGDKVHYWQKRAFFRFARN YALLSQMLLPDLYQMLAAARGCLDDNFAYAFFRLAAHYPWQREQSDIPTLRLSAAELSAGTRRIRFRPREQVRGKGRSGI KMTNRRKEKRPGDWLEGFDDPYICSYPPEDLSIEEYGRNLKRIGARQLSEEASRTEPFSASLLDGIDMRETIRNLHEGKI YVKENKRLKSGVGCVVVVFDEDREDAGYPYCMTWLGEHEQESDMAFYATPPTDNIVGPGISRCEYGGFLLSYPPRRMHDV WQDPDYRGALGKGEVLLMAALDYSLEKDVVYAAAKPPRSYLKQQAARLGKRIIYLPLGSLSPVALKRLRAFHILYGKDKR DIAKDYIW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74868; Mature: 74737
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERLHLENFGNVHALPILHYRMEFAHLVREAYEVLKPDCIAIELPRTLEPQFLRAVARL CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHC PEISVLAYHVAGQSAFLLVEPADPLIEGARLALKHRIPLHLVDIDLDSYPSHDEQLPDSY CCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCHHH AVQRIGLEPFYREVEKLYRDLEPCEEDLRRELGMAHRLQQLSAQHQRVLFICGMSHLVRI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHH RENFGRPLAQPLTRTHREGIAIFNLHPECCHEVLAEYPFLSSLYETRRSPLPPEPAQAAS HHHHCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHH LRKSFNAFELILGGKQSIPEEQALLESIQRSAHRIGDEGEMPDRQKIMLRLFLEAARHYR HHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH QETGDKVHYWQKRAFFRFARNYALLSQMLLPDLYQMLAAARGCLDDNFAYAFFRLAAHYP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC WQREQSDIPTLRLSAAELSAGTRRIRFRPREQVRGKGRSGIKMTNRRKEKRPGDWLEGFD CCCCCCCCCEEEEEHHHHCCCCCEEECCCHHHHCCCCCCCCEEHHHHHHCCCCCHHHCCC DPYICSYPPEDLSIEEYGRNLKRIGARQLSEEASRTEPFSASLLDGIDMRETIRNLHEGK CCEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCE IYVKENKRLKSGVGCVVVVFDEDREDAGYPYCMTWLGEHEQESDMAFYATPPTDNIVGPG EEEECCCHHHCCCCEEEEEECCCCCCCCCCEEEHHCCCCCCCCCEEEEECCCCCCCCCCC ISRCEYGGFLLSYPPRRMHDVWQDPDYRGALGKGEVLLMAALDYSLEKDVVYAAAKPPRS CCHHCCCCEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCHHH YLKQQAARLGKRIIYLPLGSLSPVALKRLRAFHILYGKDKRDIAKDYIW HHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC >Mature Secondary Structure PERLHLENFGNVHALPILHYRMEFAHLVREAYEVLKPDCIAIELPRTLEPQFLRAVARL CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHC PEISVLAYHVAGQSAFLLVEPADPLIEGARLALKHRIPLHLVDIDLDSYPSHDEQLPDSY CCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCHHH AVQRIGLEPFYREVEKLYRDLEPCEEDLRRELGMAHRLQQLSAQHQRVLFICGMSHLVRI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHH RENFGRPLAQPLTRTHREGIAIFNLHPECCHEVLAEYPFLSSLYETRRSPLPPEPAQAAS HHHHCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHH LRKSFNAFELILGGKQSIPEEQALLESIQRSAHRIGDEGEMPDRQKIMLRLFLEAARHYR HHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH QETGDKVHYWQKRAFFRFARNYALLSQMLLPDLYQMLAAARGCLDDNFAYAFFRLAAHYP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC WQREQSDIPTLRLSAAELSAGTRRIRFRPREQVRGKGRSGIKMTNRRKEKRPGDWLEGFD CCCCCCCCCEEEEEHHHHCCCCCEEECCCHHHHCCCCCCCCEEHHHHHHCCCCCHHHCCC DPYICSYPPEDLSIEEYGRNLKRIGARQLSEEASRTEPFSASLLDGIDMRETIRNLHEGK CCEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCE IYVKENKRLKSGVGCVVVVFDEDREDAGYPYCMTWLGEHEQESDMAFYATPPTDNIVGPG EEEECCCHHHCCCCEEEEEECCCCCCCCCCEEEHHCCCCCCCCCEEEEECCCCCCCCCCC ISRCEYGGFLLSYPPRRMHDVWQDPDYRGALGKGEVLLMAALDYSLEKDVVYAAAKPPRS CCHHCCCCEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCHHH YLKQQAARLGKRIIYLPLGSLSPVALKRLRAFHILYGKDKRDIAKDYIW HHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA