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The map label for this gene is hdrC [H]

Identifier: 197116432

GI number: 197116432

Start: 38754

End: 39338

Strand: Reverse

Name: hdrC [H]

Synonym: Gbem_0032

Alternate gene names: 197116432

Gene position: 39338-38754 (Counterclockwise)

Preceding gene: 197116436

Following gene: 197116431

Centisome position: 0.85

GC content: 60.85

Gene sequence:

>585_bases
GTGAAAAACAAATTGATGCACCTGTCGAACGAGACCATGAACGTCGGTTTCGTGAAAAAGGTGGAGGCGCTTTCCGGCAG
CTCGGTGCGGCGCTGTTTCCAGTGCGGCAAGTGCTCCGCCGGCTGCCCGATGTCGGCGTTCATGGAGCACCCCCCCAACC
GGATCGTCCGGCTACTGCAGCTCGGGCAGGGGCAGCGCGTCCTCGCCGGCCGCTCCATCTGGTACTGCGCCTCCTGCGAG
ACCTGCACCACCCGCTGCCCGAACAAGGTCGACCTCGCCGGCATCATGGACGCGCTGAGAAAGCTCTCCTGGGACGCCGA
CGGCCCCTCGAAGGAAAGCTACGTGCAGCTCGCCAACCGGCTCTTCATCGAGAACATCCGCACCTACGGCAGGCAGTACG
AGCTGAGGCTTGGCGCCGCGTTCAACATGAAGAGCGGGCAGTTCCTGAAAGACCTGATGCTCGGGCCGAAGCTGATCTCC
AAGGGAAAGCTCAAGATGTTCCATTCGAAAAACAAGAACATCGGTGAGATCGAGGCGATCTTCAAGAGGATCGAGGAGAT
GCGCAAGAAAGGAGAGGCGCTGTGA

Upstream 100 bases:

>100_bases
AAGAATGACATGTGAAGGAACTTTCTCCTTGCGTCCCGGTCGGAGTGGTCGTATGATTCTCGCCGTTTATTAAATTTCTC
ACTACCTCACGAGGTCCGCT

Downstream 100 bases:

>100_bases
CACCTGGCAAGAAACGGCTCAATTATTCCTACTACCCCGGCTGCTCGCTGCATGCCTCGGGGCGCGAATACGACATCTCC
ACCCGGGCGCTTTTCAAAGC

Product: heterodisulfide reductase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKNKLMHLSNETMNVGFVKKVEALSGSSVRRCFQCGKCSAGCPMSAFMEHPPNRIVRLLQLGQGQRVLAGRSIWYCASCE
TCTTRCPNKVDLAGIMDALRKLSWDADGPSKESYVQLANRLFIENIRTYGRQYELRLGAAFNMKSGQFLKDLMLGPKLIS
KGKLKMFHSKNKNIGEIEAIFKRIEEMRKKGEAL

Sequences:

>Translated_194_residues
MKNKLMHLSNETMNVGFVKKVEALSGSSVRRCFQCGKCSAGCPMSAFMEHPPNRIVRLLQLGQGQRVLAGRSIWYCASCE
TCTTRCPNKVDLAGIMDALRKLSWDADGPSKESYVQLANRLFIENIRTYGRQYELRLGAAFNMKSGQFLKDLMLGPKLIS
KGKLKMFHSKNKNIGEIEAIFKRIEEMRKKGEAL
>Mature_194_residues
MKNKLMHLSNETMNVGFVKKVEALSGSSVRRCFQCGKCSAGCPMSAFMEHPPNRIVRLLQLGQGQRVLAGRSIWYCASCE
TCTTRCPNKVDLAGIMDALRKLSWDADGPSKESYVQLANRLFIENIRTYGRQYELRLGAAFNMKSGQFLKDLMLGPKLIS
KGKLKMFHSKNKNIGEIEAIFKRIEEMRKKGEAL

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrC may carry electrons from hydrogenase to hdrA [H]

COG id: COG1150

COG function: function code C; Heterodisulfide reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017680
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: NA

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 21886; Mature: 21886

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKLMHLSNETMNVGFVKKVEALSGSSVRRCFQCGKCSAGCPMSAFMEHPPNRIVRLLQ
CCCCCEECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHH
LGQGQRVLAGRSIWYCASCETCTTRCPNKVDLAGIMDALRKLSWDADGPSKESYVQLANR
HCCCCEEECCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LFIENIRTYGRQYELRLGAAFNMKSGQFLKDLMLGPKLISKGKLKMFHSKNKNIGEIEAI
HHHHHHHHHCHHEEEEECEEECCCCCHHHHHHHHCHHHHCCCCHHHHHCCCCCHHHHHHH
FKRIEEMRKKGEAL
HHHHHHHHHHCCCC
>Mature Secondary Structure
MKNKLMHLSNETMNVGFVKKVEALSGSSVRRCFQCGKCSAGCPMSAFMEHPPNRIVRLLQ
CCCCCEECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHH
LGQGQRVLAGRSIWYCASCETCTTRCPNKVDLAGIMDALRKLSWDADGPSKESYVQLANR
HCCCCEEECCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LFIENIRTYGRQYELRLGAAFNMKSGQFLKDLMLGPKLISKGKLKMFHSKNKNIGEIEAI
HHHHHHHHHCHHEEEEECEEECCCCCHHHHHHHHCHHHHCCCCHHHHHCCCCCHHHHHHH
FKRIEEMRKKGEAL
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]