Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197106392

Identifier: 197106392

GI number: 197106392

Start: 3353946

End: 3355142

Strand: Direct

Name: 197106392

Synonym: PHZ_c2931

Alternate gene names: NA

Gene position: 3353946-3355142 (Clockwise)

Preceding gene: 197106391

Following gene: 197106397

Centisome position: 83.93

GC content: 73.85

Gene sequence:

>1197_bases
GTGGTCCCTGAGGACCAGACTTTGACGGCTCGAAAGGACCTGTTCTCCCGCGCCCTGGCCGCAGATCCCGGGCGGCTGCA
CATGGCCGCCCACAGCCACCACCTGTGGCCCGACGCCACCTACGAGGCCCACATGCAGGCCTGGGAGGACGCCGCGCGCC
TGGCCGACCGCAAGTGGGACCGGGCGCTAGGCGAGGTCTACCCGCAGGCCCAGGCGCTGGTGGCCCGGGAGCTGGCCCTG
CCCTCGCCCGACAGCGTGGTCTTCGCGCCCAACACCCACACGCTGCTGGCGGTGCTGGTCTCGGCGATCGAGCGGCGGCC
GGCGCGGGTGCTGGCCACCGACGGGGAGTTCCACTCGTTCCGGCGGCAGGCGGCGCGCTGGGCCGAGACCGGGGAGATCG
AGCTGACCCTCGTGGCGGCCGAGGCGCCGGATTTCGCCGAGCGTTTCCTGGCCGCGGCGCGCGGCGGCGGCTTCGACCTG
ATCCTGGCCAGCCACGTCTTCTTCAAGAGCGGCTTCGTGTTCGACCGGGTGTGGGAGCTGGCCGAGCTGTCGAAGCCGGA
AGGGCCCTGGGTGGTGGTGGACGGCTACCACGGCTTCCGGGCGATCCCGACGGACCTGTCCGCCGTCTCTGACCGGGTCT
TCTACATCGCCGGCGGCTACAAGTACGCCATGGCCGGCGAAGGCGCGGCCTTCCTGCACGCCCCGCCGGGCTTCGCGCCG
CGGCCGGCGCTGACCGGCTGGTACGCCGAGTTCGGCGACCTGGAGGGGCCGCCGGGCGGCGTCGGCTACGCCCGCGACGC
CAGCCGGTTCCTGGGAGCCACCTTCGATCCCTCGGGCTTCTACCGGTTCGTGGCGGCCGGGCGGATGCTGGAGGCCGAGG
GGCTGACCACGGCGGCGGTGGCCGACCACGTCGGCGGCCTGCAGGCGCGGCTGCTGGAGCGGATCGCCTCGGGGGCGGCC
TCGGGGGCAGGCCGGCGGCTCGCGGAGGCGCAGGTGATCAATCCGCCGGACGGGCGGCCGCACGCCAGGTTCCTGGCCCT
GCGCCACCCGCGGGCGCCGGCCTGGAAGCAGGCGCTGATGGAGAAAGGCGTGGTGACCGACGTGCGCGACGACGTGCTGC
GGATCGGCCTCTCCGTCTACCACGACGCCGGGGACATCGACCGGGTCTGCGGGATCTGTGGAGAGGTGCTGGGGTAG

Upstream 100 bases:

>100_bases
TGACCGTCGAGCGGATCATCGGCGGGCGGCCCGGCACCGGCGGGACCGAGGGGGTCGGCTACCTGGCCAAGACCCTGCGC
CGGCGCTGCTTCCCCGAGCT

Downstream 100 bases:

>100_bases
CGCCGCCCCTCCTCCGAGGGACAGGACCCTGTGCGGCAGGGTGGCGGGGCTTGCCGGCGGGCGCGACGGACGGGGGCCAG
CCCCCTCCACCGCTTCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Kynureninase; Aminotransferase; Class V Aminotransferase; Cysteine Desulfhydrase/Selenocysteine Lyase

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MVPEDQTLTARKDLFSRALAADPGRLHMAAHSHHLWPDATYEAHMQAWEDAARLADRKWDRALGEVYPQAQALVARELAL
PSPDSVVFAPNTHTLLAVLVSAIERRPARVLATDGEFHSFRRQAARWAETGEIELTLVAAEAPDFAERFLAAARGGGFDL
ILASHVFFKSGFVFDRVWELAELSKPEGPWVVVDGYHGFRAIPTDLSAVSDRVFYIAGGYKYAMAGEGAAFLHAPPGFAP
RPALTGWYAEFGDLEGPPGGVGYARDASRFLGATFDPSGFYRFVAAGRMLEAEGLTTAAVADHVGGLQARLLERIASGAA
SGAGRRLAEAQVINPPDGRPHARFLALRHPRAPAWKQALMEKGVVTDVRDDVLRIGLSVYHDAGDIDRVCGICGEVLG

Sequences:

>Translated_398_residues
MVPEDQTLTARKDLFSRALAADPGRLHMAAHSHHLWPDATYEAHMQAWEDAARLADRKWDRALGEVYPQAQALVARELAL
PSPDSVVFAPNTHTLLAVLVSAIERRPARVLATDGEFHSFRRQAARWAETGEIELTLVAAEAPDFAERFLAAARGGGFDL
ILASHVFFKSGFVFDRVWELAELSKPEGPWVVVDGYHGFRAIPTDLSAVSDRVFYIAGGYKYAMAGEGAAFLHAPPGFAP
RPALTGWYAEFGDLEGPPGGVGYARDASRFLGATFDPSGFYRFVAAGRMLEAEGLTTAAVADHVGGLQARLLERIASGAA
SGAGRRLAEAQVINPPDGRPHARFLALRHPRAPAWKQALMEKGVVTDVRDDVLRIGLSVYHDAGDIDRVCGICGEVLG
>Mature_398_residues
MVPEDQTLTARKDLFSRALAADPGRLHMAAHSHHLWPDATYEAHMQAWEDAARLADRKWDRALGEVYPQAQALVARELAL
PSPDSVVFAPNTHTLLAVLVSAIERRPARVLATDGEFHSFRRQAARWAETGEIELTLVAAEAPDFAERFLAAARGGGFDL
ILASHVFFKSGFVFDRVWELAELSKPEGPWVVVDGYHGFRAIPTDLSAVSDRVFYIAGGYKYAMAGEGAAFLHAPPGFAP
RPALTGWYAEFGDLEGPPGGVGYARDASRFLGATFDPSGFYRFVAAGRMLEAEGLTTAAVADHVGGLQARLLERIASGAA
SGAGRRLAEAQVINPPDGRPHARFLALRHPRAPAWKQALMEKGVVTDVRDDVLRIGLSVYHDAGDIDRVCGICGEVLG

Specific function: Unknown

COG id: COG0520

COG function: function code E; Selenocysteine lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43072; Mature: 43072

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPEDQTLTARKDLFSRALAADPGRLHMAAHSHHLWPDATYEAHMQAWEDAARLADRKWD
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RALGEVYPQAQALVARELALPSPDSVVFAPNTHTLLAVLVSAIERRPARVLATDGEFHSF
HHHHHHCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHH
RRQAARWAETGEIELTLVAAEAPDFAERFLAAARGGGFDLILASHVFFKSGFVFDRVWEL
HHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHCCCHHHHHHHH
AELSKPEGPWVVVDGYHGFRAIPTDLSAVSDRVFYIAGGYKYAMAGEGAAFLHAPPGFAP
HHCCCCCCCEEEEECCCCCEECCCCHHHHCCEEEEEECCEEEEECCCCEEEEECCCCCCC
RPALTGWYAEFGDLEGPPGGVGYARDASRFLGATFDPSGFYRFVAAGRMLEAEGLTTAAV
CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCEEECCCCHHHHH
ADHVGGLQARLLERIASGAASGAGRRLAEAQVINPPDGRPHARFLALRHPRAPAWKQALM
HHHHCHHHHHHHHHHHHCCCCCCCCHHHHCEECCCCCCCCCCEEEEEECCCCHHHHHHHH
EKGVVTDVRDDVLRIGLSVYHDAGDIDRVCGICGEVLG
HCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MVPEDQTLTARKDLFSRALAADPGRLHMAAHSHHLWPDATYEAHMQAWEDAARLADRKWD
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RALGEVYPQAQALVARELALPSPDSVVFAPNTHTLLAVLVSAIERRPARVLATDGEFHSF
HHHHHHCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHH
RRQAARWAETGEIELTLVAAEAPDFAERFLAAARGGGFDLILASHVFFKSGFVFDRVWEL
HHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHCCCHHHHHHHH
AELSKPEGPWVVVDGYHGFRAIPTDLSAVSDRVFYIAGGYKYAMAGEGAAFLHAPPGFAP
HHCCCCCCCEEEEECCCCCEECCCCHHHHCCEEEEEECCEEEEECCCCEEEEECCCCCCC
RPALTGWYAEFGDLEGPPGGVGYARDASRFLGATFDPSGFYRFVAAGRMLEAEGLTTAAV
CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCEEECCCCHHHHH
ADHVGGLQARLLERIASGAASGAGRRLAEAQVINPPDGRPHARFLALRHPRAPAWKQALM
HHHHCHHHHHHHHHHHHCCCCCCCCHHHHCEECCCCCCCCCCEEEEEECCCCHHHHHHHH
EKGVVTDVRDDVLRIGLSVYHDAGDIDRVCGICGEVLG
HCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA