Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197106368

Identifier: 197106368

GI number: 197106368

Start: 3322118

End: 3322738

Strand: Direct

Name: 197106368

Synonym: PHZ_c2907

Alternate gene names: NA

Gene position: 3322118-3322738 (Clockwise)

Preceding gene: 197106365

Following gene: 197106371

Centisome position: 83.13

GC content: 76.01

Gene sequence:

>621_bases
ATGAGCGAGCAGCCCCTTCCGCCCGGCGCGCGGACCGCGCCGTCCACCGCCCGCAACCGCGAGCCAATCCTCGACGTGCT
GAAGCGGCATCTGCCCAAGCAGGGGCTGGTGCTGGAGATCGCCGCGGGGGCGGGCGAGCACGCCCTCTACAACGCCGCGG
CCCTACCCGGCCTGACCTGGCGGCCGACCGACCTGGACGAGGGGGCGCTGGCCAGCATCGAGGCCTGGCGCGAGCACGCC
GGGCCGCCGAACCTTCTGCCGCCGCTGCGGCTGGACGCCGCCCGGCCCGAGGACTGGCCGGTCCGGCGGGCGGACGCGAT
CGTCGCCATCAACATGGTCCACATCAGCCCCTGGGCGTCGACCCTGGGCCTGATGGCGGGCGCGGGCCGGGTGCTGCCGG
CCGGCGGGGTGCTGGTGCTGTACGGCCCCTACCTGGAGGACGGCGTGGCGCCCGCCCCCAGCAACCTGGCCTTCGACGCC
GACCTGAAGCGGCGCAACCCCGAGTGGGGCCTGCGGCGGGTGGCGGACGTGGCGGCGGCGGCCGCGGCGCACGGCCTCTC
GCTGGCCGAGCGGGTGGAGATGCCGGCCAACAACCTGACGCTGGTGTTCCGGAAGGGCTAG

Upstream 100 bases:

>100_bases
CTGCGACGCCGAAGGGTTAGCACGGTCCACCGCCCACGGCAGGCCTGGTCCGATGACCGTGGGGCTGGACCTCGCCGCCC
GGCGGGGCGAAGGGGAAGGC

Downstream 100 bases:

>100_bases
GCGGGCGGGTTCAGCCACTCGGTCAGGCCCTCGCGGCGGCAGACCTCGAGGAAGGCCGGGCGGGCGCGCAGGCGCGTGAC
GTAGGCCGAAAGGTTCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSEQPLPPGARTAPSTARNREPILDVLKRHLPKQGLVLEIAAGAGEHALYNAAALPGLTWRPTDLDEGALASIEAWREHA
GPPNLLPPLRLDAARPEDWPVRRADAIVAINMVHISPWASTLGLMAGAGRVLPAGGVLVLYGPYLEDGVAPAPSNLAFDA
DLKRRNPEWGLRRVADVAAAAAAHGLSLAERVEMPANNLTLVFRKG

Sequences:

>Translated_206_residues
MSEQPLPPGARTAPSTARNREPILDVLKRHLPKQGLVLEIAAGAGEHALYNAAALPGLTWRPTDLDEGALASIEAWREHA
GPPNLLPPLRLDAARPEDWPVRRADAIVAINMVHISPWASTLGLMAGAGRVLPAGGVLVLYGPYLEDGVAPAPSNLAFDA
DLKRRNPEWGLRRVADVAAAAAAHGLSLAERVEMPANNLTLVFRKG
>Mature_205_residues
SEQPLPPGARTAPSTARNREPILDVLKRHLPKQGLVLEIAAGAGEHALYNAAALPGLTWRPTDLDEGALASIEAWREHAG
PPNLLPPLRLDAARPEDWPVRRADAIVAINMVHISPWASTLGLMAGAGRVLPAGGVLVLYGPYLEDGVAPAPSNLAFDAD
LKRRNPEWGLRRVADVAAAAAAHGLSLAERVEMPANNLTLVFRKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI93102387, Length=202, Percent_Identity=41.5841584158416, Blast_Score=140, Evalue=6e-34,
Organism=Homo sapiens, GI93102391, Length=138, Percent_Identity=38.4057971014493, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI93102401, Length=132, Percent_Identity=37.8787878787879, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71998087, Length=201, Percent_Identity=35.8208955223881, Blast_Score=134, Evalue=3e-32,
Organism=Drosophila melanogaster, GI28574095, Length=203, Percent_Identity=38.423645320197, Blast_Score=145, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21901; Mature: 21770

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQPLPPGARTAPSTARNREPILDVLKRHLPKQGLVLEIAAGAGEHALYNAAALPGLTW
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCC
RPTDLDEGALASIEAWREHAGPPNLLPPLRLDAARPEDWPVRRADAIVAINMVHISPWAS
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHH
TLGLMAGAGRVLPAGGVLVLYGPYLEDGVAPAPSNLAFDADLKRRNPEWGLRRVADVAAA
HHHHHHCCCCEECCCCEEEEECCCHHCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHH
AAAHGLSLAERVEMPANNLTLVFRKG
HHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure 
SEQPLPPGARTAPSTARNREPILDVLKRHLPKQGLVLEIAAGAGEHALYNAAALPGLTW
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCC
RPTDLDEGALASIEAWREHAGPPNLLPPLRLDAARPEDWPVRRADAIVAINMVHISPWAS
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHH
TLGLMAGAGRVLPAGGVLVLYGPYLEDGVAPAPSNLAFDADLKRRNPEWGLRRVADVAAA
HHHHHHCCCCEECCCCEEEEECCCHHCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHH
AAAHGLSLAERVEMPANNLTLVFRKG
HHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA