| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106323
Identifier: 197106323
GI number: 197106323
Start: 3274778
End: 3275830
Strand: Direct
Name: 197106323
Synonym: PHZ_c2862
Alternate gene names: NA
Gene position: 3274778-3275830 (Clockwise)
Preceding gene: 197106322
Following gene: 197106324
Centisome position: 81.95
GC content: 74.64
Gene sequence:
>1053_bases ATGCCGTCCATCGTCCAATTCGGCCACATCCCATTTGGCCAGCCGCTCCGCCGGGCGCTCGCCGCCGGCGCGCTCGCCGC GGCCGCGGTCCTGGCCAGCTGCGCCGAGCCGCCCAAGGCGGTCGCCCCGCCTCCCGCCGCGCCGGTCGTCAGCCTTTCGC CGAAGGTGGTCGAGCAGGCCAGCGCCTACCGCCGCTACGTCGCCACCGCCTCGGCGATCGCGCCGGCCTTCGCCGACGGC GAGGCCGTGGCCCACGGCGTGCGCACGGGCGCGGCCTACGAGCCGCAGCAGCTTCTGCGCGGCGCCATCGCCTACGGCGC GGTCGTCGCCCTGCAGGATCCCGGCTTCGTGGCCGGCGTGCGCGCCTATGCGACCGACCCGACCCAGCGCCGCACGATCG CCTACGAGATCATGAAGGACCCGGCCTACGTCATCGGCATCGGCGGCTCGGCCGGGGCCGCGGGCCTCGTCAAGGCCGCC CTCGCCGAGGACGGCGCCAGGCTGTTCAACCAGGGCAAGGCGGTGCGCCAGGCCGCCTACGACGTCCAGCGCGCCGCCTG GTCCAAGAAGGACGTCGCCGGCCGGCAGGCCCGCCTCGCGCTCGCCAAGCAGCTCTCCGCCACGCCCGTCATGGGCGACA CCGCCGAGACCGCCCGCCTGCAGCAGGCGATCCTGTCCACCGGCTCGCTCGGGGTCACCGGCCAGGCGGCGGCCCCGCCC TACACGCCGGTGGTGATCCGCTCGATGGCGGTCGCGGCCCTGGCGGCCCTCGGCTACGCTGACGACGCCAGCCTCGAGCA GGTGATGCCGATCCTGGCCGATCCCAACGCGGCCAGCTGCCTGAACATGTCCAAGCTCAACCTCTACCAGTGCCTGGCTG TCTCCAAGCCGCACTACGAGGACGTGTTCTGCCTGGGCGTGCACAGCCTGATGGACACCGGCCGCTGCGTGCTGAAGAGC GTCGGGGCGCCCGAGCCCGTCGAGGCGCCCACCCGGCTGACGGCGGCCTCCACCGCCCCGGCCGGCGCCGGACCCACCAC CTCTACGCGCTGA
Upstream 100 bases:
>100_bases TGCGGCCAGGCTTGCTCAGCAAGAGTTTACCAAGTTAGGGCACGGTCGCCGGGGGGCAGGTGCTAAGATTCGTCCACTCG TAAGAGGGGGAGGCCTCCCG
Downstream 100 bases:
>100_bases GGCGCCAAGGTCCGACTTTTCAAGGCCCCGGCCGTTGCACTGGCCGGGGCTTTTGTGTATCTACGCGCACCTTTCGACCC CTAGGGGTCTGCGGAATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MPSIVQFGHIPFGQPLRRALAAGALAAAAVLASCAEPPKAVAPPPAAPVVSLSPKVVEQASAYRRYVATASAIAPAFADG EAVAHGVRTGAAYEPQQLLRGAIAYGAVVALQDPGFVAGVRAYATDPTQRRTIAYEIMKDPAYVIGIGGSAGAAGLVKAA LAEDGARLFNQGKAVRQAAYDVQRAAWSKKDVAGRQARLALAKQLSATPVMGDTAETARLQQAILSTGSLGVTGQAAAPP YTPVVIRSMAVAALAALGYADDASLEQVMPILADPNAASCLNMSKLNLYQCLAVSKPHYEDVFCLGVHSLMDTGRCVLKS VGAPEPVEAPTRLTAASTAPAGAGPTTSTR
Sequences:
>Translated_350_residues MPSIVQFGHIPFGQPLRRALAAGALAAAAVLASCAEPPKAVAPPPAAPVVSLSPKVVEQASAYRRYVATASAIAPAFADG EAVAHGVRTGAAYEPQQLLRGAIAYGAVVALQDPGFVAGVRAYATDPTQRRTIAYEIMKDPAYVIGIGGSAGAAGLVKAA LAEDGARLFNQGKAVRQAAYDVQRAAWSKKDVAGRQARLALAKQLSATPVMGDTAETARLQQAILSTGSLGVTGQAAAPP YTPVVIRSMAVAALAALGYADDASLEQVMPILADPNAASCLNMSKLNLYQCLAVSKPHYEDVFCLGVHSLMDTGRCVLKS VGAPEPVEAPTRLTAASTAPAGAGPTTSTR >Mature_349_residues PSIVQFGHIPFGQPLRRALAAGALAAAAVLASCAEPPKAVAPPPAAPVVSLSPKVVEQASAYRRYVATASAIAPAFADGE AVAHGVRTGAAYEPQQLLRGAIAYGAVVALQDPGFVAGVRAYATDPTQRRTIAYEIMKDPAYVIGIGGSAGAAGLVKAAL AEDGARLFNQGKAVRQAAYDVQRAAWSKKDVAGRQARLALAKQLSATPVMGDTAETARLQQAILSTGSLGVTGQAAAPPY TPVVIRSMAVAALAALGYADDASLEQVMPILADPNAASCLNMSKLNLYQCLAVSKPHYEDVFCLGVHSLMDTGRCVLKSV GAPEPVEAPTRLTAASTAPAGAGPTTSTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35739; Mature: 35608
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSIVQFGHIPFGQPLRRALAAGALAAAAVLASCAEPPKAVAPPPAAPVVSLSPKVVEQA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHH SAYRRYVATASAIAPAFADGEAVAHGVRTGAAYEPQQLLRGAIAYGAVVALQDPGFVAGV HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCEEEEECCCCCEEHH RAYATDPTQRRTIAYEIMKDPAYVIGIGGSAGAAGLVKAALAEDGARLFNQGKAVRQAAY HHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVQRAAWSKKDVAGRQARLALAKQLSATPVMGDTAETARLQQAILSTGSLGVTGQAAAPP HHHHHHCCHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC YTPVVIRSMAVAALAALGYADDASLEQVMPILADPNAASCLNMSKLNLYQCLAVSKPHYE CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHCHHHHHHHHHHHCCCCCCC DVFCLGVHSLMDTGRCVLKSVGAPEPVEAPTRLTAASTAPAGAGPTTSTR CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure PSIVQFGHIPFGQPLRRALAAGALAAAAVLASCAEPPKAVAPPPAAPVVSLSPKVVEQA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHH SAYRRYVATASAIAPAFADGEAVAHGVRTGAAYEPQQLLRGAIAYGAVVALQDPGFVAGV HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCEEEEECCCCCEEHH RAYATDPTQRRTIAYEIMKDPAYVIGIGGSAGAAGLVKAALAEDGARLFNQGKAVRQAAY HHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVQRAAWSKKDVAGRQARLALAKQLSATPVMGDTAETARLQQAILSTGSLGVTGQAAAPP HHHHHHCCHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC YTPVVIRSMAVAALAALGYADDASLEQVMPILADPNAASCLNMSKLNLYQCLAVSKPHYE CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHCHHHHHHHHHHHCCCCCCC DVFCLGVHSLMDTGRCVLKSVGAPEPVEAPTRLTAASTAPAGAGPTTSTR CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA