| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106320
Identifier: 197106320
GI number: 197106320
Start: 3271838
End: 3272917
Strand: Direct
Name: 197106320
Synonym: PHZ_c2859
Alternate gene names: NA
Gene position: 3271838-3272917 (Clockwise)
Preceding gene: 197106319
Following gene: 197106321
Centisome position: 81.87
GC content: 75.37
Gene sequence:
>1080_bases GTGAGCCGCAACCTCGCCGAGAAGCTGGCCGCCCAGATCGCCGCCGGCGGGCCGCTGACCGTGGCCCAGTACATGACCGC CTGCCTGCACGACCCGCAGTTCGGCTACTACGCCACCCGGCCGGCGCTGGGCGAGGGGGGCGACTTCGTCACCGCGCCCC TGGTCAGCCAGATGTTCGGCGAGCTGGTCGGCGTCTGGGCGGCGGTCTCCTGGGAGCTGATGGGCCGCCCCGAGACCGTG CGGCTGGTCGAGATGGGCCCCGGGGACGGCACGCTGATGGGCGACGTCCTGCGCGCCGCGCGCATGGCCCCCGGATTCCT AGACGCCGCCGATGTCTGGCTGGTCGAGACGTCCGAGCCGCTGAAGGCGCGCCAGCGCGAACGGCTGGGCGATGGCCCCC GCTGGGCCGCATCCCTCGCCGAGGTTCCGGGCGAGGCGCCCCTGATCCTGTTCGCCAACGAGCTCCTCGACTGCCTGCCC GTGCGCCAGTTCGTGCGCACCGCCACCGGCTGGGCCGAGCAGGTCGTCGGCCTCGACGACCAAGGGGGCTCCGGGGGGCG GCTGGCCTTCGGCCGCGTCGCCACCCCCGCCGGGACCCTGCTGCCCGACGCCCGCGAAGGGGCGGTGTTCGAACAGTCCG CCGCCCAGGAGGCGCTGGGCTCCGAGATCGGCGCCCGCGTGGTCCGCGACGGCGGCGCGGCCCTGCTGATCGACTACGGC CGCGCCCGGCCGGGCTTCGGCGACACGCTCCAGGCCCTGCGCCGGCACGAGCGGGTCGATCCCCTCGCCTGCCCCGGCGA GGCGGACCTCACCGTCCACGCCGACTTCCCCGCCGTGATGGCCGCCGCGGAGGGTGAGGGCGCGCAGGCCGCAATCCTCA CCCAGGCCGAGTTCCTGGCCCGGCTCGGGATCGGCGAGCGCGCCGAGGCCCTGGTGCGCGCCCGCCCCGACAAGGCGCCG GTCGTCGGCCGTCAGCTCAACCGCCTAGTGGCCGCCGACCAGATGGGCGAGCTCTTCAAGGCCTGCTGCCTGCACTCCCC CGGCTGGACGCCGCCGGCTTTCGAAGAGGCCGATGCATGA
Upstream 100 bases:
>100_bases TCTACCTGTCGATCCCGATGCTGCTGTTCGGGCTGTGGCTGATCTGGCGCGGCATGCGCGAGGAGACGCCCCCCGCCCTC GCCCCGGCCGACAAGCCGGC
Downstream 100 bases:
>100_bases GCGACCTCCCCCTCCTGACCTCGCCGCTGCTGGACCTGCCGGGCGTGCGCCACGCCTTCTTCACCCGCCAGGGCGGGGTC TCGCAGGGGATCTACGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSRNLAEKLAAQIAAGGPLTVAQYMTACLHDPQFGYYATRPALGEGGDFVTAPLVSQMFGELVGVWAAVSWELMGRPETV RLVEMGPGDGTLMGDVLRAARMAPGFLDAADVWLVETSEPLKARQRERLGDGPRWAASLAEVPGEAPLILFANELLDCLP VRQFVRTATGWAEQVVGLDDQGGSGGRLAFGRVATPAGTLLPDAREGAVFEQSAAQEALGSEIGARVVRDGGAALLIDYG RARPGFGDTLQALRRHERVDPLACPGEADLTVHADFPAVMAAAEGEGAQAAILTQAEFLARLGIGERAEALVRARPDKAP VVGRQLNRLVAADQMGELFKACCLHSPGWTPPAFEEADA
Sequences:
>Translated_359_residues MSRNLAEKLAAQIAAGGPLTVAQYMTACLHDPQFGYYATRPALGEGGDFVTAPLVSQMFGELVGVWAAVSWELMGRPETV RLVEMGPGDGTLMGDVLRAARMAPGFLDAADVWLVETSEPLKARQRERLGDGPRWAASLAEVPGEAPLILFANELLDCLP VRQFVRTATGWAEQVVGLDDQGGSGGRLAFGRVATPAGTLLPDAREGAVFEQSAAQEALGSEIGARVVRDGGAALLIDYG RARPGFGDTLQALRRHERVDPLACPGEADLTVHADFPAVMAAAEGEGAQAAILTQAEFLARLGIGERAEALVRARPDKAP VVGRQLNRLVAADQMGELFKACCLHSPGWTPPAFEEADA >Mature_358_residues SRNLAEKLAAQIAAGGPLTVAQYMTACLHDPQFGYYATRPALGEGGDFVTAPLVSQMFGELVGVWAAVSWELMGRPETVR LVEMGPGDGTLMGDVLRAARMAPGFLDAADVWLVETSEPLKARQRERLGDGPRWAASLAEVPGEAPLILFANELLDCLPV RQFVRTATGWAEQVVGLDDQGGSGGRLAFGRVATPAGTLLPDAREGAVFEQSAAQEALGSEIGARVVRDGGAALLIDYGR ARPGFGDTLQALRRHERVDPLACPGEADLTVHADFPAVMAAAEGEGAQAAILTQAEFLARLGIGERAEALVRARPDKAPV VGRQLNRLVAADQMGELFKACCLHSPGWTPPAFEEADA
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21396487, Length=371, Percent_Identity=34.5013477088949, Blast_Score=184, Evalue=9e-47, Organism=Homo sapiens, GI145701028, Length=346, Percent_Identity=26.3005780346821, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI193211224, Length=376, Percent_Identity=30.0531914893617, Blast_Score=163, Evalue=1e-40, Organism=Drosophila melanogaster, GI24645885, Length=378, Percent_Identity=34.1269841269841, Blast_Score=177, Evalue=1e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37905; Mature: 37773
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNLAEKLAAQIAAGGPLTVAQYMTACLHDPQFGYYATRPALGEGGDFVTAPLVSQMFG CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEHHHHHHHHHH ELVGVWAAVSWELMGRPETVRLVEMGPGDGTLMGDVLRAARMAPGFLDAADVWLVETSEP HHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCH LKARQRERLGDGPRWAASLAEVPGEAPLILFANELLDCLPVRQFVRTATGWAEQVVGLDD HHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QGGSGGRLAFGRVATPAGTLLPDAREGAVFEQSAAQEALGSEIGARVVRDGGAALLIDYG CCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC RARPGFGDTLQALRRHERVDPLACPGEADLTVHADFPAVMAAAEGEGAQAAILTQAEFLA CCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHEECCCCCCCCHHHHHHHHHH RLGIGERAEALVRARPDKAPVVGRQLNRLVAADQMGELFKACCLHSPGWTPPAFEEADA HCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SRNLAEKLAAQIAAGGPLTVAQYMTACLHDPQFGYYATRPALGEGGDFVTAPLVSQMFG CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEHHHHHHHHHH ELVGVWAAVSWELMGRPETVRLVEMGPGDGTLMGDVLRAARMAPGFLDAADVWLVETSEP HHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCH LKARQRERLGDGPRWAASLAEVPGEAPLILFANELLDCLPVRQFVRTATGWAEQVVGLDD HHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QGGSGGRLAFGRVATPAGTLLPDAREGAVFEQSAAQEALGSEIGARVVRDGGAALLIDYG CCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC RARPGFGDTLQALRRHERVDPLACPGEADLTVHADFPAVMAAAEGEGAQAAILTQAEFLA CCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHEECCCCCCCCHHHHHHHHHH RLGIGERAEALVRARPDKAPVVGRQLNRLVAADQMGELFKACCLHSPGWTPPAFEEADA HCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA