Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197106252

Identifier: 197106252

GI number: 197106252

Start: 3202218

End: 3202925

Strand: Direct

Name: 197106252

Synonym: PHZ_c2791

Alternate gene names: NA

Gene position: 3202218-3202925 (Clockwise)

Preceding gene: 197106251

Following gene: 197106253

Centisome position: 80.13

GC content: 71.89

Gene sequence:

>708_bases
ATGCAGAGGCCCGTCCCCGCGTTGCAGAACAGTCTGCTCGAAGCGCTTCCGGCTGACGATTACGCGCTGCTGGCGCCGCA
CCTGGCCCAGGTGGAGCTGGAGCGCGGCCGGCTGCTCTACGACCCGGGCGATCCCATCGAGTCCGTCTACTTCCCGCACG
ACGGGGTGATCTCGCTGATGACCCTGATGGACAACGGCGCGGCCATCGAAAGCGCCACCATCGGGCCGGAGGGCGCCCTG
GGCCTGATGGCCGCCGTCGCCCCGCGCCAGTCGCTGTCGCGCGCCCTCGTCCAGACGCCGCTGCGCGCCGCCCGGATCAG
CGCCGAGCGGCTGCACGAGGCCTGGAGCCGCAGCGCGCGGCTGAAGGACCTGGTGGACCGGCACACCGAGGCGCTGTTCG
GCCACGCCATCCAGTCGGTGGCCTGCAACGCCCTGCACTCGGTGGAGGCGCGGTTCTGCCGCTGGCTGCTGACCTGCCAC
GACCGGATCTCCACCGACACCGTGGCCCTGACCCAGGAGTTCCTGGCCGACATGCTGGGCGTGCAGCGCACGACGGTCAC
CGCCGTGGCCCGCTCGCTGCAGGAGAAGGGCCTGATCCGCTACCGCCGCGGCGTCGTGGACATCCTGGACCGCGGCGGGC
TCGAGACCCTGGCCTGCGAGTGCTACGGCGTGATCCGCCGCAACTACCACCGCCTGCTGCCGGGGTGA

Upstream 100 bases:

>100_bases
TCCACCGCCAACCATAGGCAGTGTCGAGTTCACGACAGTGTTGCGGCGTGCGCATCGATAACTTGAAACCCCCGCCGCAC
GGCGGCGTTTCAAATCCCCG

Downstream 100 bases:

>100_bases
TCCCGCCCCGCCCTTGAGCGGGGGCGCGGGGGGCGGGGAGCGGCCGATACCTCCGGTTTCGATTGCGCCGGGCAGGATTT
CCCTCTTTCTTTCGGCGCTT

Product: transcriptional regulator(cAMP-binding)

Products: NA

Alternate protein names: CRP/FNR Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Protein Crp; Transcriptional Regulator Protein; Transcriptional Regulator; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptional Regulator CAP/Crp Family; Transcriptional Regulator Crp/Fnr Family Protein

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MQRPVPALQNSLLEALPADDYALLAPHLAQVELERGRLLYDPGDPIESVYFPHDGVISLMTLMDNGAAIESATIGPEGAL
GLMAAVAPRQSLSRALVQTPLRAARISAERLHEAWSRSARLKDLVDRHTEALFGHAIQSVACNALHSVEARFCRWLLTCH
DRISTDTVALTQEFLADMLGVQRTTVTAVARSLQEKGLIRYRRGVVDILDRGGLETLACECYGVIRRNYHRLLPG

Sequences:

>Translated_235_residues
MQRPVPALQNSLLEALPADDYALLAPHLAQVELERGRLLYDPGDPIESVYFPHDGVISLMTLMDNGAAIESATIGPEGAL
GLMAAVAPRQSLSRALVQTPLRAARISAERLHEAWSRSARLKDLVDRHTEALFGHAIQSVACNALHSVEARFCRWLLTCH
DRISTDTVALTQEFLADMLGVQRTTVTAVARSLQEKGLIRYRRGVVDILDRGGLETLACECYGVIRRNYHRLLPG
>Mature_235_residues
MQRPVPALQNSLLEALPADDYALLAPHLAQVELERGRLLYDPGDPIESVYFPHDGVISLMTLMDNGAAIESATIGPEGAL
GLMAAVAPRQSLSRALVQTPLRAARISAERLHEAWSRSARLKDLVDRHTEALFGHAIQSVACNALHSVEARFCRWLLTCH
DRISTDTVALTQEFLADMLGVQRTTVTAVARSLQEKGLIRYRRGVVDILDRGGLETLACECYGVIRRNYHRLLPG

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25885; Mature: 25885

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRPVPALQNSLLEALPADDYALLAPHLAQVELERGRLLYDPGDPIESVYFPHDGVISLM
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHCCCCCCHHHHHH
TLMDNGAAIESATIGPEGALGLMAAVAPRQSLSRALVQTPLRAARISAERLHEAWSRSAR
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKDLVDRHTEALFGHAIQSVACNALHSVEARFCRWLLTCHDRISTDTVALTQEFLADMLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
VQRTTVTAVARSLQEKGLIRYRRGVVDILDRGGLETLACECYGVIRRNYHRLLPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQRPVPALQNSLLEALPADDYALLAPHLAQVELERGRLLYDPGDPIESVYFPHDGVISLM
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHCCCCCCHHHHHH
TLMDNGAAIESATIGPEGALGLMAAVAPRQSLSRALVQTPLRAARISAERLHEAWSRSAR
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKDLVDRHTEALFGHAIQSVACNALHSVEARFCRWLLTCHDRISTDTVALTQEFLADMLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
VQRTTVTAVARSLQEKGLIRYRRGVVDILDRGGLETLACECYGVIRRNYHRLLPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA