| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is nadA [H]
Identifier: 197106068
GI number: 197106068
Start: 2997188
End: 2998273
Strand: Direct
Name: nadA [H]
Synonym: PHZ_c2607
Alternate gene names: 197106068
Gene position: 2997188-2998273 (Clockwise)
Preceding gene: 197106067
Following gene: 197106069
Centisome position: 75.0
GC content: 68.23
Gene sequence:
>1086_bases ATGGCCGCCGACGGTTCGCAGTTCGCCTTCACGCCTGAGGTCGAGGCCGAGACCCTTCCCGCATGGGAGAAGGTGAAGCG CCACGTCACGCCGATGGAATGGCGCGCGCACGCCCCGCTGATCGCCGAGATCAACCGGCTGAAGCGCGAGAAGAACGCCG TCATCCTCGCCCACAACTACATGACGCCCGAGATCTTCCACGGCGTCGGCGACTACGTGGGCGACAGCCTGGGGCTGGCG AAGGAAGCGGCCAAGTCCGACGCTGCGGTGATCGTTCAGGCGGGCGTCCACTTCATGGCCGAGACGTCCAAGATCCTCAG CCCCGAGAAGCGCGTCCTGATCCCCGACCTGCGGGCCGGCTGCTCGCTGGCCAGCTCGATCACCGGCGCGGACGTGCGCC TGATCAAGCAGCGCTATCCCGGCCTGCCGGTGGTCACCTACGTCAACACCACCGCCGACGTGAAGGCGGAGACCGACATC TGCTGCACCAGCGCCAACGCCGTGCAGGTGGTGGAGGAAGCCGCCAGGCTGTGGGGCGTCGACAAGGTGGTCCTGATCCC CGACGAGTTCCTCGCCCGCAACGTCGCCCGCCAGACCGACATCGGCATCATCGCCTGGAAGGGCCGTTGCGAGGTGCACG AGCGCTTCACCGCCGAGGACATCCTCGAGATCAAGGCCGCCTATCCGGGCGCCGAGGTCCTGGCCCACCCCGAGTGCCCG GCCGAGGTGCTGGAGGTCTCGGACTTCGCCGGCTCGACGGCGGCGATGAACGACTACGTGCTGCAGAGGAAGCCCAAGCG CGTGGTTCTGATCACCGAGTGCTCGATGGCCGACAACGTGGCCGCCGACGCGCATGGCACCGAGTTCGTGCGCCCCTGCA ATCTGTGCCCCCACATGAAGCGGATCAGCCTGGAGAACATCTACGAGGCCCTGCTCCACGACCGGCACGAAGTGACCGTC GACCCGGCGATCGCCGAGCGCGCCCGCCTGGCGGTCCAGCGGATGATCGACCTGCCGCCGCCGGCCAGGCCCGCCCGCTA CGACCTCGTGAAGGCCCGCCACCACGTCGACGTGGAGCTGATCTGA
Upstream 100 bases:
>100_bases GGTTTTGCTCCGATTGAGCAAAAGTGATCGCGCCACGGGCATCCGGGCGCCTTTTTAAAAGCCCCAGTAATGCTCACTAT GAGCATAAGGGAGGGACGAC
Downstream 100 bases:
>100_bases TGGCCCTGCTCCGCCAAGGCTGCGCAGGGCATGGCCCCGATCCTTCGAAGCGCCCGAAGGGAGCGAACTAGGATGGCCGA CCGCATCCGCCACGACGGGA
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MAADGSQFAFTPEVEAETLPAWEKVKRHVTPMEWRAHAPLIAEINRLKREKNAVILAHNYMTPEIFHGVGDYVGDSLGLA KEAAKSDAAVIVQAGVHFMAETSKILSPEKRVLIPDLRAGCSLASSITGADVRLIKQRYPGLPVVTYVNTTADVKAETDI CCTSANAVQVVEEAARLWGVDKVVLIPDEFLARNVARQTDIGIIAWKGRCEVHERFTAEDILEIKAAYPGAEVLAHPECP AEVLEVSDFAGSTAAMNDYVLQRKPKRVVLITECSMADNVAADAHGTEFVRPCNLCPHMKRISLENIYEALLHDRHEVTV DPAIAERARLAVQRMIDLPPPARPARYDLVKARHHVDVELI
Sequences:
>Translated_361_residues MAADGSQFAFTPEVEAETLPAWEKVKRHVTPMEWRAHAPLIAEINRLKREKNAVILAHNYMTPEIFHGVGDYVGDSLGLA KEAAKSDAAVIVQAGVHFMAETSKILSPEKRVLIPDLRAGCSLASSITGADVRLIKQRYPGLPVVTYVNTTADVKAETDI CCTSANAVQVVEEAARLWGVDKVVLIPDEFLARNVARQTDIGIIAWKGRCEVHERFTAEDILEIKAAYPGAEVLAHPECP AEVLEVSDFAGSTAAMNDYVLQRKPKRVVLITECSMADNVAADAHGTEFVRPCNLCPHMKRISLENIYEALLHDRHEVTV DPAIAERARLAVQRMIDLPPPARPARYDLVKARHHVDVELI >Mature_360_residues AADGSQFAFTPEVEAETLPAWEKVKRHVTPMEWRAHAPLIAEINRLKREKNAVILAHNYMTPEIFHGVGDYVGDSLGLAK EAAKSDAAVIVQAGVHFMAETSKILSPEKRVLIPDLRAGCSLASSITGADVRLIKQRYPGLPVVTYVNTTADVKAETDIC CTSANAVQVVEEAARLWGVDKVVLIPDEFLARNVARQTDIGIIAWKGRCEVHERFTAEDILEIKAAYPGAEVLAHPECPA EVLEVSDFAGSTAAMNDYVLQRKPKRVVLITECSMADNVAADAHGTEFVRPCNLCPHMKRISLENIYEALLHDRHEVTVD PAIAERARLAVQRMIDLPPPARPARYDLVKARHHVDVELI
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=325, Percent_Identity=34.4615384615385, Blast_Score=177, Evalue=7e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 - InterPro: IPR023066 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 39785; Mature: 39654
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADGSQFAFTPEVEAETLPAWEKVKRHVTPMEWRAHAPLIAEINRLKREKNAVILAHNY CCCCCCCEEECCCCCCCCCCHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCCEEEEEECC MTPEIFHGVGDYVGDSLGLAKEAAKSDAAVIVQAGVHFMAETSKILSPEKRVLIPDLRAG CCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCEEECCCHHHH CSLASSITGADVRLIKQRYPGLPVVTYVNTTADVKAETDICCTSANAVQVVEEAARLWGV HHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCC DKVVLIPDEFLARNVARQTDIGIIAWKGRCEVHERFTAEDILEIKAAYPGAEVLAHPECP CEEEECCHHHHHHHHHHHCCCEEEEECCCCHHHHHCCHHHHHHHHHCCCCHHEEECCCCC AEVLEVSDFAGSTAAMNDYVLQRKPKRVVLITECSMADNVAADAHGTEFVRPCNLCPHMK HHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH RISLENIYEALLHDRHEVTVDPAIAERARLAVQRMIDLPPPARPARYDLVKARHHVDVEL HCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEE I C >Mature Secondary Structure AADGSQFAFTPEVEAETLPAWEKVKRHVTPMEWRAHAPLIAEINRLKREKNAVILAHNY CCCCCCEEECCCCCCCCCCHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCCEEEEEECC MTPEIFHGVGDYVGDSLGLAKEAAKSDAAVIVQAGVHFMAETSKILSPEKRVLIPDLRAG CCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCEEECCCHHHH CSLASSITGADVRLIKQRYPGLPVVTYVNTTADVKAETDICCTSANAVQVVEEAARLWGV HHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCC DKVVLIPDEFLARNVARQTDIGIIAWKGRCEVHERFTAEDILEIKAAYPGAEVLAHPECP CEEEECCHHHHHHHHHHHCCCEEEEECCCCHHHHHCCHHHHHHHHHCCCCHHEEECCCCC AEVLEVSDFAGSTAAMNDYVLQRKPKRVVLITECSMADNVAADAHGTEFVRPCNLCPHMK HHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH RISLENIYEALLHDRHEVTVDPAIAERARLAVQRMIDLPPPARPARYDLVKARHHVDVEL HCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEE I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA