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The map label for this gene is atoS [C]

Identifier: 197106067

GI number: 197106067

Start: 2994991

End: 2996979

Strand: Direct

Name: atoS [C]

Synonym: PHZ_c2606

Alternate gene names: 197106067

Gene position: 2994991-2996979 (Clockwise)

Preceding gene: 197106065

Following gene: 197106068

Centisome position: 74.94

GC content: 73.6

Gene sequence:

>1989_bases
ATGAAGCCTTCGGAGTGGCCGCTTCGCCTGATCCCGCGCCGCTCGCCTCCGCTGTGGCGGGCGCTGGCGGTCAGCGTCGT
GGCCCTGGGGATCGCGATGTCGCTGCGCGGCGCCCTGCTGGGCTGGCAGCACATGGGCGGCCTCGGCTCGACCAGCCTGC
CCGCCCTCACGGTCATCTGCCTCTACGCCGGGCCCACGTTCGGCTGGGGCGCGCTGATCGTGGCCATCATCGTCGGCGCG
CTCTCGCCGATCGTGCAGCCCACGGGGGCCCCGAGCGCCGCGGTCGTGGCGATGTTCGCGCTTTCGGGGGCGATCACCGT
CCTGTTCTCGAGCGCCATGCGCGAGGCCCTGATCCGGCTGGACGAGGCCAAGGCCGCGCAGGAGGCCGCCCGCCGCGCCT
CCGCCGACTCCGAGGCGCGCTTCCGCGTGCTGGCCGACAGCGCCCCGATCCTGATGTGGGTCACCCGTGCGGACGGAAGG
CGGGAGTTCGCCAACCGAACCTATGTGGAATGGCTGGGCGCGCCCTATGAGGAGGCGCTCGATTTCGACTGGCGCAAGGT
GCTGCACCCCGACGATCTGCCGCGCATCCTGAAGGAGCAGGTCGAGGGTGAAAGCTCGCGCCGGCTGTTCACCCTCGAGG
CCCGCTACCGCGTGGCCGACGGGAGCTACCGGTGGATTCGCTCCGTCTCCCAGCCGCGCTTTGACCCGGCGGGCGCGTTC
GACGGCTTCGTCGGGGTGGGCTTCGACGTCACCGACTCCAAGCGGGCCGAGGCGGACCTGAAGCGGATCAACGACCTCCT
CGCCGAGCGGGTGCAGGCGGCGCTCACCGAACGCGACCAGGCCGAGGCGGCCCTGCGCCGGGCGCAGAAGCTGGAGGCGG
TGGGCCAGCTCACCGGCGGCGTCGCCCACGACTTCAACAACCTGCTCACCGTGGTCATCGGCGCCCTGGACCTGATGCAA
CGCCACCCGGCCGATGCGGCCCGTCGCGAGCGGATGATCGAGGCGGCGCTGGGCGCGGCCCGCCGCGGCGAAAGGCTGAC
CCAGCAACTCCTGGCCTTCTCGCGCCGCCAGGCCCTCAAGCCCGAGCCGGTGCGCGTGGACGAGATGCTGGCCGAGTGCG
AGCCCCTCCTGCGGCGGGCGGTGGGCGAGGCGGTGAGCTTCGTGCTCGCGCCGGGGGCCCAGGGAGCGGTCGTGGACCTC
GATCCCAGCCAGTTCGAGGCCGCCCTGATGAACCTGGTGGTCAACGCGCGCGACGCGACGCCCGCAGGCGGCCGGATCTG
CGTCGAGACGCGCCGCGTGCGGCTGGACGCCGGCCAGATCGAGGAACTGGACGCCGGCGACTACCTCTGCGTGGCGGTGC
ACGACACGGGCAGCGGCATGGACGCCGAGACCGCCGCGCGGGTGTTCGAGCCCTTCTTCACCACCAAGGCGCCGGGCCGC
GGCACCGGGCTGGGCCTGTCCCAGGTCTACGGCTTCGCCCGCCAGAGCGGCGGCACGGCCACCCTCGACAGCGCCCCCGG
CAAGGGCGCCAGCGTGCGGATCTTCCTGCCCCTCTCGACCGCCTCGGCCGCGCCGGCCTCCGAGCCGGGCCGGGCCGAGA
CGCAGGGCGGGCCCTCGCTGCGGGTGCTGCTGGCCGAGGATGACGCCCAGGTGGCCGAGCTGGTCGAGGCCCTCCTGACC
GACCTCGGACACCAGGTGGTCCGCGCCGAGGACGCCGCCCAGGCGCTGGCGGTGCTGAAGAGCGGCCGGCCGGCGGACCT
CTTGCTGACGGACCTGATCATGCCGGGCGACATGAACGGGGTGGACCTCGCGCGTGAGGCCGTGCGCCTGCGGCCGGGCC
TGCCCGTGATCCTATCGTCGGGCTACACCGGCGAGGCGCTGGAGGCCGCCGCCGGCGCGCCCTGGCCGATGCTCAAGAAG
CCCTACGGCGGAGATCAGCTCGCCGCCGTCATCGCCGAGGCCCTTGCGGGCGCGCCGGAAATCGTCTGA

Upstream 100 bases:

>100_bases
AAACTTCGGCCATCTCACCGCAGGGTTGCGCCTGCACGCCGGCCCCCGCATGGTGATCGGCGGCCCAAGGGACGGGCTGC
GTTCGCCGAGTACCCCGCCG

Downstream 100 bases:

>100_bases
GGACGATCCTGCGCGGGCGAGATCGCCTGAAGGCGGCAGATCGTTTGAAAACCCGGGTTAGGTTTTCTCCCTTGCGCGGG
TTCACGGGGGCGCTATATCT

Product: sensor histidine kinase/response regulator

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MKPSEWPLRLIPRRSPPLWRALAVSVVALGIAMSLRGALLGWQHMGGLGSTSLPALTVICLYAGPTFGWGALIVAIIVGA
LSPIVQPTGAPSAAVVAMFALSGAITVLFSSAMREALIRLDEAKAAQEAARRASADSEARFRVLADSAPILMWVTRADGR
REFANRTYVEWLGAPYEEALDFDWRKVLHPDDLPRILKEQVEGESSRRLFTLEARYRVADGSYRWIRSVSQPRFDPAGAF
DGFVGVGFDVTDSKRAEADLKRINDLLAERVQAALTERDQAEAALRRAQKLEAVGQLTGGVAHDFNNLLTVVIGALDLMQ
RHPADAARRERMIEAALGAARRGERLTQQLLAFSRRQALKPEPVRVDEMLAECEPLLRRAVGEAVSFVLAPGAQGAVVDL
DPSQFEAALMNLVVNARDATPAGGRICVETRRVRLDAGQIEELDAGDYLCVAVHDTGSGMDAETAARVFEPFFTTKAPGR
GTGLGLSQVYGFARQSGGTATLDSAPGKGASVRIFLPLSTASAAPASEPGRAETQGGPSLRVLLAEDDAQVAELVEALLT
DLGHQVVRAEDAAQALAVLKSGRPADLLLTDLIMPGDMNGVDLAREAVRLRPGLPVILSSGYTGEALEAAAGAPWPMLKK
PYGGDQLAAVIAEALAGAPEIV

Sequences:

>Translated_662_residues
MKPSEWPLRLIPRRSPPLWRALAVSVVALGIAMSLRGALLGWQHMGGLGSTSLPALTVICLYAGPTFGWGALIVAIIVGA
LSPIVQPTGAPSAAVVAMFALSGAITVLFSSAMREALIRLDEAKAAQEAARRASADSEARFRVLADSAPILMWVTRADGR
REFANRTYVEWLGAPYEEALDFDWRKVLHPDDLPRILKEQVEGESSRRLFTLEARYRVADGSYRWIRSVSQPRFDPAGAF
DGFVGVGFDVTDSKRAEADLKRINDLLAERVQAALTERDQAEAALRRAQKLEAVGQLTGGVAHDFNNLLTVVIGALDLMQ
RHPADAARRERMIEAALGAARRGERLTQQLLAFSRRQALKPEPVRVDEMLAECEPLLRRAVGEAVSFVLAPGAQGAVVDL
DPSQFEAALMNLVVNARDATPAGGRICVETRRVRLDAGQIEELDAGDYLCVAVHDTGSGMDAETAARVFEPFFTTKAPGR
GTGLGLSQVYGFARQSGGTATLDSAPGKGASVRIFLPLSTASAAPASEPGRAETQGGPSLRVLLAEDDAQVAELVEALLT
DLGHQVVRAEDAAQALAVLKSGRPADLLLTDLIMPGDMNGVDLAREAVRLRPGLPVILSSGYTGEALEAAAGAPWPMLKK
PYGGDQLAAVIAEALAGAPEIV
>Mature_662_residues
MKPSEWPLRLIPRRSPPLWRALAVSVVALGIAMSLRGALLGWQHMGGLGSTSLPALTVICLYAGPTFGWGALIVAIIVGA
LSPIVQPTGAPSAAVVAMFALSGAITVLFSSAMREALIRLDEAKAAQEAARRASADSEARFRVLADSAPILMWVTRADGR
REFANRTYVEWLGAPYEEALDFDWRKVLHPDDLPRILKEQVEGESSRRLFTLEARYRVADGSYRWIRSVSQPRFDPAGAF
DGFVGVGFDVTDSKRAEADLKRINDLLAERVQAALTERDQAEAALRRAQKLEAVGQLTGGVAHDFNNLLTVVIGALDLMQ
RHPADAARRERMIEAALGAARRGERLTQQLLAFSRRQALKPEPVRVDEMLAECEPLLRRAVGEAVSFVLAPGAQGAVVDL
DPSQFEAALMNLVVNARDATPAGGRICVETRRVRLDAGQIEELDAGDYLCVAVHDTGSGMDAETAARVFEPFFTTKAPGR
GTGLGLSQVYGFARQSGGTATLDSAPGKGASVRIFLPLSTASAAPASEPGRAETQGGPSLRVLLAEDDAQVAELVEALLT
DLGHQVVRAEDAAQALAVLKSGRPADLLLTDLIMPGDMNGVDLAREAVRLRPGLPVILSSGYTGEALEAAAGAPWPMLKK
PYGGDQLAAVIAEALAGAPEIV

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=246, Percent_Identity=29.6747967479675, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1790436, Length=253, Percent_Identity=27.6679841897233, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI48994928, Length=542, Percent_Identity=24.169741697417, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI87081816, Length=228, Percent_Identity=31.140350877193, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI145693157, Length=346, Percent_Identity=26.0115606936416, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788713, Length=337, Percent_Identity=25.2225519287834, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1786600, Length=251, Percent_Identity=28.6852589641434, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 70542; Mature: 70542

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSEWPLRLIPRRSPPLWRALAVSVVALGIAMSLRGALLGWQHMGGLGSTSLPALTVIC
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LYAGPTFGWGALIVAIIVGALSPIVQPTGAPSAAVVAMFALSGAITVLFSSAMREALIRL
HHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEAKAAQEAARRASADSEARFRVLADSAPILMWVTRADGRREFANRTYVEWLGAPYEEAL
HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHCCHHHHHHCCCHHHHH
DFDWRKVLHPDDLPRILKEQVEGESSRRLFTLEARYRVADGSYRWIRSVSQPRFDPAGAF
CCCHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCC
DGFVGVGFDVTDSKRAEADLKRINDLLAERVQAALTERDQAEAALRRAQKLEAVGQLTGG
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
VAHDFNNLLTVVIGALDLMQRHPADAARRERMIEAALGAARRGERLTQQLLAFSRRQALK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEPVRVDEMLAECEPLLRRAVGEAVSFVLAPGAQGAVVDLDPSQFEAALMNLVVNARDAT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCC
PAGGRICVETRRVRLDAGQIEELDAGDYLCVAVHDTGSGMDAETAARVFEPFFTTKAPGR
CCCCEEEEEEHEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC
GTGLGLSQVYGFARQSGGTATLDSAPGKGASVRIFLPLSTASAAPASEPGRAETQGGPSL
CCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCE
RVLLAEDDAQVAELVEALLTDLGHQVVRAEDAAQALAVLKSGRPADLLLTDLIMPGDMNG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCH
VDLAREAVRLRPGLPVILSSGYTGEALEAAAGAPWPMLKKPYGGDQLAAVIAEALAGAPE
HHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
IV
CC
>Mature Secondary Structure
MKPSEWPLRLIPRRSPPLWRALAVSVVALGIAMSLRGALLGWQHMGGLGSTSLPALTVIC
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LYAGPTFGWGALIVAIIVGALSPIVQPTGAPSAAVVAMFALSGAITVLFSSAMREALIRL
HHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEAKAAQEAARRASADSEARFRVLADSAPILMWVTRADGRREFANRTYVEWLGAPYEEAL
HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHCCHHHHHHCCCHHHHH
DFDWRKVLHPDDLPRILKEQVEGESSRRLFTLEARYRVADGSYRWIRSVSQPRFDPAGAF
CCCHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCC
DGFVGVGFDVTDSKRAEADLKRINDLLAERVQAALTERDQAEAALRRAQKLEAVGQLTGG
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
VAHDFNNLLTVVIGALDLMQRHPADAARRERMIEAALGAARRGERLTQQLLAFSRRQALK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEPVRVDEMLAECEPLLRRAVGEAVSFVLAPGAQGAVVDLDPSQFEAALMNLVVNARDAT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCC
PAGGRICVETRRVRLDAGQIEELDAGDYLCVAVHDTGSGMDAETAARVFEPFFTTKAPGR
CCCCEEEEEEHEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC
GTGLGLSQVYGFARQSGGTATLDSAPGKGASVRIFLPLSTASAAPASEPGRAETQGGPSL
CCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCE
RVLLAEDDAQVAELVEALLTDLGHQVVRAEDAAQALAVLKSGRPADLLLTDLIMPGDMNG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCH
VDLAREAVRLRPGLPVILSSGYTGEALEAAAGAPWPMLKKPYGGDQLAAVIAEALAGAPE
HHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
IV
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA