| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105988
Identifier: 197105988
GI number: 197105988
Start: 2901166
End: 2902032
Strand: Reverse
Name: 197105988
Synonym: PHZ_c2527
Alternate gene names: NA
Gene position: 2902032-2901166 (Counterclockwise)
Preceding gene: 197105989
Following gene: 197105987
Centisome position: 72.62
GC content: 71.05
Gene sequence:
>867_bases ATGCCTCTCGACTACCAGCGCCTGATGACGATGGAGCCGATCGAGACCGTCCAGGATCTCCGGCCGCGGGACTGCATCCT CTATGCGCTCGGCGTCGGCGTGGGCGCCGAACGGCCAACCGACCCGGGTGAACTGCAGTACGTCTACGAGAACGGGCTGA AGACGCTGCCGACCATGGCCGTCGTCCTCGCCTACCCCGGCTTCTGGGCCAAGGATCCCCAGTACGGCCTGACCTGGGAG CGGCTGCTCCACGGAGAGCAGTCCGTCGAGATCCACGCCCCTTTGCCGGTGGAGGGCCGGCTGCGCGGCGTCACCACCAT CGACGAGATCTACGACAAGGGCCGCGACAAGGGCGCGGTCCTCTATTCGAGCCGCCGGGTCTACCGGGACCTGACCGGCG AGCTCCTGGCCACCGTGCGCCAGTCCAGCTTCCTGCGGGCGGACGGCGGGTTCGGAGGGCGCGCCGACGGGGCGCCGCGG CCGCACCCGACGCCGGAGCGGGCGCCGGACATGACCCTCACCGCCGCCACGCGGCCGGATCAGGCGCTGATCTATCGGCT CTCGGGCGACGACAACCCCCTGCACGTGGATCCTAAGGTAGCCGCGGCGGGCGGCTTCGACCGTCCGATCCTGCATGGTC TCGGCGCCTTCGGGATCGTGGGCCGCGCCCTCGTGCGCAGCCTTTGCGACGACGACCCGGCCCGGCTGCGCAGGCTGGAT GTACGCTTCTCCAGCCCGGCCTATCCTGGGGACCGGTTCGAGATCGACGTCTGGCGGGCGCCGGAGGGGTGCGCCGCCTT CCAGGTGCGCGCCGCCGGCCGCGACGTGGTGGTGCAGCGGAACGGATACGCGGAGTTCGGAGCATAG
Upstream 100 bases:
>100_bases GCATGCAGGTGCTGAAAGACAAGGTGTCGAGGACGCCGCGCCGAGCTTCCAGCCGCTCGAGCGGTCGCCGGAAGCGCTCT TGTTGGGGGCCGATCTGAGC
Downstream 100 bases:
>100_bases ACATGGTCGGGATCATCGCAGCGGGCGCCTATGTCCCGCGCCTTCGACTTCAGAAGCAGGCGATCGCCGCCGCGCACGCC TGGTTCGCGCCCGGCCTCAA
Product: acyl dehydratase
Products: NA
Alternate protein names: Dehydratase; MaoC-Like Dehydratase; Dehydrogenase; Acyl Dehydratase; UfaA2 Protein; MaoC-Like Domain-Containing; Enoyl-CoA Hydratase; Short-Chain Dehydrogenase/Reductase SDR; MaoC Family Protein; Hydratase; -Specific Enoyl-CoA Hydratase; 2-Enoyl Acyl-CoA Hydratase; MaoC Acyl Dehydratase; MaoC Family Dehydratase; Multifunctional; Enoyl-CoA Hydratase/3-Hydroxyacyl-CoA Dehydratase; MaoC Like Dehydratase/Enoyl-CoA Hydratase; MaoC-Like-Specific Enoyl-CoA Hydratase; MaoC-Like Domain-Containing Protein; MaoC Family Dehydrogenase/Dehydratase; MaoC Like Domain Protein
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MPLDYQRLMTMEPIETVQDLRPRDCILYALGVGVGAERPTDPGELQYVYENGLKTLPTMAVVLAYPGFWAKDPQYGLTWE RLLHGEQSVEIHAPLPVEGRLRGVTTIDEIYDKGRDKGAVLYSSRRVYRDLTGELLATVRQSSFLRADGGFGGRADGAPR PHPTPERAPDMTLTAATRPDQALIYRLSGDDNPLHVDPKVAAAGGFDRPILHGLGAFGIVGRALVRSLCDDDPARLRRLD VRFSSPAYPGDRFEIDVWRAPEGCAAFQVRAAGRDVVVQRNGYAEFGA
Sequences:
>Translated_288_residues MPLDYQRLMTMEPIETVQDLRPRDCILYALGVGVGAERPTDPGELQYVYENGLKTLPTMAVVLAYPGFWAKDPQYGLTWE RLLHGEQSVEIHAPLPVEGRLRGVTTIDEIYDKGRDKGAVLYSSRRVYRDLTGELLATVRQSSFLRADGGFGGRADGAPR PHPTPERAPDMTLTAATRPDQALIYRLSGDDNPLHVDPKVAAAGGFDRPILHGLGAFGIVGRALVRSLCDDDPARLRRLD VRFSSPAYPGDRFEIDVWRAPEGCAAFQVRAAGRDVVVQRNGYAEFGA >Mature_287_residues PLDYQRLMTMEPIETVQDLRPRDCILYALGVGVGAERPTDPGELQYVYENGLKTLPTMAVVLAYPGFWAKDPQYGLTWER LLHGEQSVEIHAPLPVEGRLRGVTTIDEIYDKGRDKGAVLYSSRRVYRDLTGELLATVRQSSFLRADGGFGGRADGAPRP HPTPERAPDMTLTAATRPDQALIYRLSGDDNPLHVDPKVAAAGGFDRPILHGLGAFGIVGRALVRSLCDDDPARLRRLDV RFSSPAYPGDRFEIDVWRAPEGCAAFQVRAAGRDVVVQRNGYAEFGA
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4504505, Length=272, Percent_Identity=36.3970588235294, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17532783, Length=276, Percent_Identity=36.9565217391304, Blast_Score=159, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6322861, Length=274, Percent_Identity=33.5766423357664, Blast_Score=124, Evalue=1e-29, Organism=Drosophila melanogaster, GI18859837, Length=260, Percent_Identity=34.6153846153846, Blast_Score=160, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31718; Mature: 31587
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDYQRLMTMEPIETVQDLRPRDCILYALGVGVGAERPTDPGELQYVYENGLKTLPTMA CCCCHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHH VVLAYPGFWAKDPQYGLTWERLLHGEQSVEIHAPLPVEGRLRGVTTIDEIYDKGRDKGAV HHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEE LYSSRRVYRDLTGELLATVRQSSFLRADGGFGGRADGAPRPHPTPERAPDMTLTAATRPD EECCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC QALIYRLSGDDNPLHVDPKVAAAGGFDRPILHGLGAFGIVGRALVRSLCDDDPARLRRLD CEEEEEECCCCCCEEECCCEEECCCCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHEEE VRFSSPAYPGDRFEIDVWRAPEGCAAFQVRAAGRDVVVQRNGYAEFGA EEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCCC >Mature Secondary Structure PLDYQRLMTMEPIETVQDLRPRDCILYALGVGVGAERPTDPGELQYVYENGLKTLPTMA CCCHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHH VVLAYPGFWAKDPQYGLTWERLLHGEQSVEIHAPLPVEGRLRGVTTIDEIYDKGRDKGAV HHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEE LYSSRRVYRDLTGELLATVRQSSFLRADGGFGGRADGAPRPHPTPERAPDMTLTAATRPD EECCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC QALIYRLSGDDNPLHVDPKVAAAGGFDRPILHGLGAFGIVGRALVRSLCDDDPARLRRLD CEEEEEECCCCCCEEECCCEEECCCCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHEEE VRFSSPAYPGDRFEIDVWRAPEGCAAFQVRAAGRDVVVQRNGYAEFGA EEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA