| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105946
Identifier: 197105946
GI number: 197105946
Start: 2848839
End: 2850287
Strand: Reverse
Name: 197105946
Synonym: PHZ_c2485
Alternate gene names: NA
Gene position: 2850287-2848839 (Counterclockwise)
Preceding gene: 197105947
Following gene: 197105945
Centisome position: 71.32
GC content: 66.94
Gene sequence:
>1449_bases ATGCTGTTCGAACCCGGCGCCGTCGATGTCCTGGTCGTGCTGTTCGCGATCAGCCAGATCCTCTACGCCCTTGCCTTCGT CAACGACTTCTACCTGTTCAGCCTGCCGGTGAACCGGGTGCAGATCTCGGACGCGCGCGACACGCCCGAGCGCGACTACC CGGACATCGTGATGTTCTATCCGGTGCTGAACGAGCTGGAATCCACGATGCGGACGACGCTGATCGCGCTCGACCGCGTC CTCTATCCGGCCGGCAAGAAGCGCGTCATCGCGATCCCCAACTGGGACGACGCCCGGACGCTGGCCAGCCTGAAGCGCCT GCAGTTCGAGTTTCCGTTCCTGGAGCTGCTGGAGGTGCCGGCGACGAGCGATCCCAGCTGGGCGCGGGTGTGGAAGGCCT GGGACGCCAACGAGAAGGCCTATTGGTGGCACGTGGGCCGGCGCGCCGGCGACCGCAACCTGCCGCCGAAGAAGACGCGC CAGCTGATCTACGCCTTCTACCGCACCTACGAGGAGGGCGAGGGGCGGGAGTTCCTGGTCAACTACATCGACGCCGACAG CTGCCCGCCGCCGAACCACTTCATGGCCGCGGTGGCCGGCATGCGGCGCTACGACGTGCTGCAGGCGAAGAACGTGGCCG GCAACCTGAACGCCAGCCTGGCGGCCAGTTGGCACTCCTTCGACCACATGAACTGGGACGGGATGAAGTACGCCCACCTG TCGGCCAACGGCCGCCAGCCCTACTGGATGCTGGGCAAGGGCCTCTTCTTCCGCGCCTCCGACCTCTACGAGCTCGGCAG CTTCCACCCCTGGATCACCATCGAGGATCCCGAGGTCGGCATGCGGTTCTGGAAGAACGGCAAGCGCCTGGGCGTGATCG AGAGCCCGCTCATCGAGGAGGTGCCGCTGACCTTCGGCCGCGGGATCACCCAGCGCAAGCGGTGGGTCTGCGGCTTCTTC CAGAGCCTGGGCGAGCCGACCCGCCGGCTGGGCTTCAGCGCCTGGGAACGGGTCAAGGCCTGGCTGATCTTCCTGCCGTG CCTGTCGCTGTGGGTGAACCTGATCGGCTATCCGGTGGGCGCCTGGGCGATGTGGGCGCTGGTGCGCGGCGAGAACGTGC TGCCGCTCTGGCTGGTGATCCTGGCCGCGATCAACATCGTCGCCTTCGCCGTCTCGCTGACCGTGCTCTACGTGAACACC TGGAAGCGGACGGCCCTCGTGCTCGAACGCAAGCGGGACCGGGTCGCCTACATGCTGCGGGTCAATCCGCTGTTCGTCGC CGCCTGGTGGCTGATGTGGCTCATCCCGCTCGGCATCGGCCTGTGGATGTACCTGCGCGACCTCGGCCAGGTGTGGGAGC GCACCGAGAAGATCAACGCCAACGAAGACCTGATCACCGTGCATCAGGGCGGGGCCGCCCACCAGGGCGCCGTCTACCGG CCCGCGTAA
Upstream 100 bases:
>100_bases TCCGGCGCGAGCACCGCGCCAGCTTCGGAGACGCCGCCGTCGCGGCCCACGGCTGAGGCCGCGGGGCCAGTCGTTTCAAC CCCCTCGGGAGGGCCTGAAC
Downstream 100 bases:
>100_bases GGAGGACCCGGGATGCCCGAACGTCACGCGCTCATCACCGGCGGCGCCGGCTTCATCGGATCGCACCTGACCGACGTCCT GCTGGACCGTGGCTTCCAGG
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MLFEPGAVDVLVVLFAISQILYALAFVNDFYLFSLPVNRVQISDARDTPERDYPDIVMFYPVLNELESTMRTTLIALDRV LYPAGKKRVIAIPNWDDARTLASLKRLQFEFPFLELLEVPATSDPSWARVWKAWDANEKAYWWHVGRRAGDRNLPPKKTR QLIYAFYRTYEEGEGREFLVNYIDADSCPPPNHFMAAVAGMRRYDVLQAKNVAGNLNASLAASWHSFDHMNWDGMKYAHL SANGRQPYWMLGKGLFFRASDLYELGSFHPWITIEDPEVGMRFWKNGKRLGVIESPLIEEVPLTFGRGITQRKRWVCGFF QSLGEPTRRLGFSAWERVKAWLIFLPCLSLWVNLIGYPVGAWAMWALVRGENVLPLWLVILAAINIVAFAVSLTVLYVNT WKRTALVLERKRDRVAYMLRVNPLFVAAWWLMWLIPLGIGLWMYLRDLGQVWERTEKINANEDLITVHQGGAAHQGAVYR PA
Sequences:
>Translated_482_residues MLFEPGAVDVLVVLFAISQILYALAFVNDFYLFSLPVNRVQISDARDTPERDYPDIVMFYPVLNELESTMRTTLIALDRV LYPAGKKRVIAIPNWDDARTLASLKRLQFEFPFLELLEVPATSDPSWARVWKAWDANEKAYWWHVGRRAGDRNLPPKKTR QLIYAFYRTYEEGEGREFLVNYIDADSCPPPNHFMAAVAGMRRYDVLQAKNVAGNLNASLAASWHSFDHMNWDGMKYAHL SANGRQPYWMLGKGLFFRASDLYELGSFHPWITIEDPEVGMRFWKNGKRLGVIESPLIEEVPLTFGRGITQRKRWVCGFF QSLGEPTRRLGFSAWERVKAWLIFLPCLSLWVNLIGYPVGAWAMWALVRGENVLPLWLVILAAINIVAFAVSLTVLYVNT WKRTALVLERKRDRVAYMLRVNPLFVAAWWLMWLIPLGIGLWMYLRDLGQVWERTEKINANEDLITVHQGGAAHQGAVYR PA >Mature_482_residues MLFEPGAVDVLVVLFAISQILYALAFVNDFYLFSLPVNRVQISDARDTPERDYPDIVMFYPVLNELESTMRTTLIALDRV LYPAGKKRVIAIPNWDDARTLASLKRLQFEFPFLELLEVPATSDPSWARVWKAWDANEKAYWWHVGRRAGDRNLPPKKTR QLIYAFYRTYEEGEGREFLVNYIDADSCPPPNHFMAAVAGMRRYDVLQAKNVAGNLNASLAASWHSFDHMNWDGMKYAHL SANGRQPYWMLGKGLFFRASDLYELGSFHPWITIEDPEVGMRFWKNGKRLGVIESPLIEEVPLTFGRGITQRKRWVCGFF QSLGEPTRRLGFSAWERVKAWLIFLPCLSLWVNLIGYPVGAWAMWALVRGENVLPLWLVILAAINIVAFAVSLTVLYVNT WKRTALVLERKRDRVAYMLRVNPLFVAAWWLMWLIPLGIGLWMYLRDLGQVWERTEKINANEDLITVHQGGAAHQGAVYR PA
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55566; Mature: 55566
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFEPGAVDVLVVLFAISQILYALAFVNDFYLFSLPVNRVQISDARDTPERDYPDIVMFY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCCCEEEHH PVLNELESTMRTTLIALDRVLYPAGKKRVIAIPNWDDARTLASLKRLQFEFPFLELLEVP HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHCC ATSDPSWARVWKAWDANEKAYWWHVGRRAGDRNLPPKKTRQLIYAFYRTYEEGEGREFLV CCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE NYIDADSCPPPNHFMAAVAGMRRYDVLQAKNVAGNLNASLAASWHSFDHMNWDGMKYAHL EEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEECHHHCCCCCCCCEEEEEE SANGRQPYWMLGKGLFFRASDLYELGSFHPWITIEDPEVGMRFWKNGKRLGVIESPLIEE CCCCCCCEEEECCCCEEECHHHHHHCCCCCCEEECCCHHHHHHHCCCCEEECCCCCCHHH VPLTFGRGITQRKRWVCGFFQSLGEPTRRLGFSAWERVKAWLIFLPCLSLWVNLIGYPVG CCHHHCCCCHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AWAMWALVRGENVLPLWLVILAAINIVAFAVSLTVLYVNTWKRTALVLERKRDRVAYMLR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHCCCEEEEEE VNPLFVAAWWLMWLIPLGIGLWMYLRDLGQVWERTEKINANEDLITVHQGGAAHQGAVYR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC PA CC >Mature Secondary Structure MLFEPGAVDVLVVLFAISQILYALAFVNDFYLFSLPVNRVQISDARDTPERDYPDIVMFY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCCCEEEHH PVLNELESTMRTTLIALDRVLYPAGKKRVIAIPNWDDARTLASLKRLQFEFPFLELLEVP HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHCC ATSDPSWARVWKAWDANEKAYWWHVGRRAGDRNLPPKKTRQLIYAFYRTYEEGEGREFLV CCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE NYIDADSCPPPNHFMAAVAGMRRYDVLQAKNVAGNLNASLAASWHSFDHMNWDGMKYAHL EEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEECHHHCCCCCCCCEEEEEE SANGRQPYWMLGKGLFFRASDLYELGSFHPWITIEDPEVGMRFWKNGKRLGVIESPLIEE CCCCCCCEEEECCCCEEECHHHHHHCCCCCCEEECCCHHHHHHHCCCCEEECCCCCCHHH VPLTFGRGITQRKRWVCGFFQSLGEPTRRLGFSAWERVKAWLIFLPCLSLWVNLIGYPVG CCHHHCCCCHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AWAMWALVRGENVLPLWLVILAAINIVAFAVSLTVLYVNTWKRTALVLERKRDRVAYMLR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHCCCEEEEEE VNPLFVAAWWLMWLIPLGIGLWMYLRDLGQVWERTEKINANEDLITVHQGGAAHQGAVYR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC PA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA