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The map label for this gene is galE [C]

Identifier: 197105945

GI number: 197105945

Start: 2847687

End: 2848826

Strand: Reverse

Name: galE [C]

Synonym: PHZ_c2484

Alternate gene names: 197105945

Gene position: 2848826-2847687 (Counterclockwise)

Preceding gene: 197105946

Following gene: 197105943

Centisome position: 71.29

GC content: 71.4

Gene sequence:

>1140_bases
ATGCCCGAACGTCACGCGCTCATCACCGGCGGCGCCGGCTTCATCGGATCGCACCTGACCGACGTCCTGCTGGACCGTGG
CTTCCAGGTGACCGTGCTGGACTGCCTGCTGCCGCAGGTCCACGCCGACGGCGAACTCGACGCCGAGGGGTGGCCCACCT
ACCTCAATCCCGCCGCCCGGCGGATCCGCGGGGACATCCTCGACCCCGGCGTGTTCGAGGCCGCGCTGGAGGGTGTCACC
CACCTGGTCCACCTCGCCGCCTCGGTGGGGGTCGGCCAGAGCATGACCAACATCGTCGACTACACCCGCAACAACACGAT
GGGCGCGGCGGTGATGCTGGAGGCGCTGTCGAAGGGCCGCCATGCGGTGGAGCGGATCGCCGTCGCCTCGTCCATGTCGA
TCTATGGCGAGGGCGAGTACCGCGCGCCGTCCACCGGCCGCGAGGTGGTCCCCGGGCTGCGCAGCCACGAGCAGCTCAAG
GCCCGCCGGTGGGACCTGGAGGCGGACGGCGAGCGCCTGGAGCCCGTGCCCACGTCCGAGGACAAGCGGCTGCAGCCGGC
CTCGATCTACGCCATCAACAAGCGCGACCACGAGGACATGTTCCTGGCGGTCGGCCGGGCGCTGGAGATCCCGACCGTGG
CCCTGCGGCTGTTCAACGCCTACGGCTCGCGCCAGGCGCTGAGCAACCCGTACACGGGGGTGGCGGCGATCTTCATCTCG
CGCCTGCTCAACGACCAGCCGCCGCTGGTGTTCGAGGACGGCGAGCAGCTGCGCGACTTCGTGCACGTGCGCGACGTCGC
CGACGCCTTCGCCACGGTGCTGGAGAGCGACGCGCAGGTGTGGGACGCCTACAACGTCGGCAGCGGCCAGCCGGTCCGCA
TCGTCGAGATGGCGGCGGCCCTCGCCCTGCTGCTGCGCAAGAACATCGCCCCGGAGCGGCTCGACCGCTACCGCGTCGGC
GACATCCGCCACTGCTTCCCCGACATCCGGCGCATCGAGCGCGACTTCGGCTTCCGGCCGCGGCGCAGCTTCGAGACGGG
GATGGAGGAACTGATCGACTGGGTGGCCCGGGCGCCCCGGCCGCAGGATCGCGCGGCCCAGAGCCTCGCCGAGCTCACCG
AGAGCCGGCTGGTCGTGTGA

Upstream 100 bases:

>100_bases
CACCGAGAAGATCAACGCCAACGAAGACCTGATCACCGTGCATCAGGGCGGGGCCGCCCACCAGGGCGCCGTCTACCGGC
CCGCGTAAGGAGGACCCGGG

Downstream 100 bases:

>100_bases
CGGGTGCGCCGGTCAGGCCGCAGCCAGGGTGTCGCGCAGGGCCCAGTACATGGGCTTGGGGCGCAGGCCGTGGTCGTAGG
GCAGGCCGCGGTTGACCCCG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MPERHALITGGAGFIGSHLTDVLLDRGFQVTVLDCLLPQVHADGELDAEGWPTYLNPAARRIRGDILDPGVFEAALEGVT
HLVHLAASVGVGQSMTNIVDYTRNNTMGAAVMLEALSKGRHAVERIAVASSMSIYGEGEYRAPSTGREVVPGLRSHEQLK
ARRWDLEADGERLEPVPTSEDKRLQPASIYAINKRDHEDMFLAVGRALEIPTVALRLFNAYGSRQALSNPYTGVAAIFIS
RLLNDQPPLVFEDGEQLRDFVHVRDVADAFATVLESDAQVWDAYNVGSGQPVRIVEMAAALALLLRKNIAPERLDRYRVG
DIRHCFPDIRRIERDFGFRPRRSFETGMEELIDWVARAPRPQDRAAQSLAELTESRLVV

Sequences:

>Translated_379_residues
MPERHALITGGAGFIGSHLTDVLLDRGFQVTVLDCLLPQVHADGELDAEGWPTYLNPAARRIRGDILDPGVFEAALEGVT
HLVHLAASVGVGQSMTNIVDYTRNNTMGAAVMLEALSKGRHAVERIAVASSMSIYGEGEYRAPSTGREVVPGLRSHEQLK
ARRWDLEADGERLEPVPTSEDKRLQPASIYAINKRDHEDMFLAVGRALEIPTVALRLFNAYGSRQALSNPYTGVAAIFIS
RLLNDQPPLVFEDGEQLRDFVHVRDVADAFATVLESDAQVWDAYNVGSGQPVRIVEMAAALALLLRKNIAPERLDRYRVG
DIRHCFPDIRRIERDFGFRPRRSFETGMEELIDWVARAPRPQDRAAQSLAELTESRLVV
>Mature_378_residues
PERHALITGGAGFIGSHLTDVLLDRGFQVTVLDCLLPQVHADGELDAEGWPTYLNPAARRIRGDILDPGVFEAALEGVTH
LVHLAASVGVGQSMTNIVDYTRNNTMGAAVMLEALSKGRHAVERIAVASSMSIYGEGEYRAPSTGREVVPGLRSHEQLKA
RRWDLEADGERLEPVPTSEDKRLQPASIYAINKRDHEDMFLAVGRALEIPTVALRLFNAYGSRQALSNPYTGVAAIFISR
LLNDQPPLVFEDGEQLRDFVHVRDVADAFATVLESDAQVWDAYNVGSGQPVRIVEMAAALALLLRKNIAPERLDRYRVGD
IRHCFPDIRRIERDFGFRPRRSFETGMEELIDWVARAPRPQDRAAQSLAELTESRLVV

Specific function: Galactose metabolism; third step. [C]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Escherichia coli, GI1788353, Length=365, Percent_Identity=22.7397260273973, Blast_Score=76, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17539532, Length=351, Percent_Identity=24.7863247863248, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 42024; Mature: 41893

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERHALITGGAGFIGSHLTDVLLDRGFQVTVLDCLLPQVHADGELDAEGWPTYLNPAAR
CCCCCEEEECCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
RIRGDILDPGVFEAALEGVTHLVHLAASVGVGQSMTNIVDYTRNNTMGAAVMLEALSKGR
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HAVERIAVASSMSIYGEGEYRAPSTGREVVPGLRSHEQLKARRWDLEADGERLEPVPTSE
HHHHHHHHHHHHEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
DKRLQPASIYAINKRDHEDMFLAVGRALEIPTVALRLFNAYGSRQALSNPYTGVAAIFIS
CCCCCCCEEEEECCCCCHHHHHHHCCHHCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHH
RLLNDQPPLVFEDGEQLRDFVHVRDVADAFATVLESDAQVWDAYNVGSGQPVRIVEMAAA
HHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHH
LALLLRKNIAPERLDRYRVGDIRHCFPDIRRIERDFGFRPRRSFETGMEELIDWVARAPR
HHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
PQDRAAQSLAELTESRLVV
CHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PERHALITGGAGFIGSHLTDVLLDRGFQVTVLDCLLPQVHADGELDAEGWPTYLNPAAR
CCCCEEEECCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
RIRGDILDPGVFEAALEGVTHLVHLAASVGVGQSMTNIVDYTRNNTMGAAVMLEALSKGR
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HAVERIAVASSMSIYGEGEYRAPSTGREVVPGLRSHEQLKARRWDLEADGERLEPVPTSE
HHHHHHHHHHHHEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
DKRLQPASIYAINKRDHEDMFLAVGRALEIPTVALRLFNAYGSRQALSNPYTGVAAIFIS
CCCCCCCEEEEECCCCCHHHHHHHCCHHCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHH
RLLNDQPPLVFEDGEQLRDFVHVRDVADAFATVLESDAQVWDAYNVGSGQPVRIVEMAAA
HHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHH
LALLLRKNIAPERLDRYRVGDIRHCFPDIRRIERDFGFRPRRSFETGMEELIDWVARAPR
HHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
PQDRAAQSLAELTESRLVV
CHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]