| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105940
Identifier: 197105940
GI number: 197105940
Start: 2840137
End: 2842845
Strand: Reverse
Name: 197105940
Synonym: PHZ_c2479
Alternate gene names: NA
Gene position: 2842845-2840137 (Counterclockwise)
Preceding gene: 197105941
Following gene: 197105939
Centisome position: 71.14
GC content: 71.72
Gene sequence:
>2709_bases ATGGACCAGCCTCGTACAGGGCGCCGACGGCACGATCCTGTCGACCCGGACCGCCGGCGGCTTCGTCGGCGTCACCTTCG GCCTCTACGCCTACGCCCCGGAGTCCTGATGTTCCCGATCTCGTGCCGCGCCCTGGGCCTGGCCGTCTTCGCCGCCGTCC TGGCCTTCGGATCCGCCGCGTCCGCTTGCGACACGCCGGTGTCGGTGTGCGCCACGGCCTCGGCCGGGGCCTTCCCGCTG ATCCGCGGCGGGACCCCGGCGGCGGTGCTGGTGGAGGCGTCGGCCGATCCGGCCGTGCGCCACGCCGCGGACGGCTTCGC CGCCGACCTGCAGCGGGTCGGGGGCCGTGCGCCGGCGCGGATCTCCGATCCCGCCCAGGCGAGGGGCGACCTCGTCCTCG TCGGCGTGCTGGGACAGAGCCCGGCCATCGACGGTCTCGTCGCGGCCGGCCGGCTCGACGCGTCCGGCCTCGCCGGCCAG TGGGAAGCGTTCCGCCAGGTGGTGGTCGAGCGGCCGTTCCCGAACGTGCCGCGGGCGCTGGTGATCGTGGGCTCGGACCG CCGCGGGGCGGTGTTCGGCGCCTACGACCTGTCGGAGAAGATCGGCGTCTCGCCCTGGCATTGGTTCGCCGACGCCCCGG TCGAGCGGCGGGCGAACGTCTACCTGACCGCCGGCGCGCGCGGGGACCAGCCGAAAGTCCGCTACCGTGGCTTCTTCATC AACGACGAGGCGCCGGCCCTCACCACCTGGGCCGAGCAGAAGTTCGGCGGGGCGAACTCGAAGATGTACGCCCACGTCTT CGAGCTGCTGCTGCGGTTGAAGGGCAACTATCTGTGGCCGGCCATGTGGCAGCCGCGGGCCTTCAACGACGACGATCCCC GCAACATGGTCCTGGCCGACGAGATGGGCGTGGTGATGGGCACGTCCCACCACGAGCCGATGACCCGGGCCCACGACGAA TGGCACCGGAACAAGGACGGCGGCGTCACCGGCGGACGCTGGGACTATGCGAGCAACGGCGAGAACCTGCGGCGGTTCTG GCGCGGCGGCGTCGAGCGGATGATGTCGAAAGAGGGCGGCGGGGGCTACGAGACCGTGGTCACCCTCGGCATGCGCGGCG ACGGCGACGAGGCGATGAGCGAGGAGACCGCCACCCAGCTGCTGGAGACCATCGTCGCCGACCAGCGCAGGATCATCGCC GACGTCACAGGCCGGCCGCCCGAGGAAACCCCGCAGGTCTGGGCGCTCTACAAGGAGGTGCAGGACTACTACGACAACGG GATGCAGGTCCCCGAGGACGTGATCCTGCTGTTCGCCGACGACAACTGGGGCCAGATCCGGCGGCTGCCGACGGGCGACC TCGACCGGAAGGGCGGCTACGGCGTCTACTACCACTTCGACTACGTGGGGGCGCCGCGGAACTACAAGTGGCTGAACAAC ACCCAGGTCGAGAAGACCTGGCAGCAGATGGACCTGGCGTGGCGGCGCGGCGCGCGGGCGCTGTGGATCGTCAACGTCGG CGACATCAAGCCGATGGAGTTCCCCTTGAGCTTCTTCATGGCGCAGGCCTGGAACCCCGAGGCGATGACGCCGGAGGCCC TGGCCGCGTATCCCGAGGACTGGGCGCGGCGGACCTTCGGCCCCGCCCAGGCGGCCGAGATCGGCGAGCTCCTCACCCGT TATTCCAAGTACGCCGCGCGGCGGAAACCCGAGCTCATCGACGCGCGCAGCTTCCGCCTGGGCGAGGGGGCCGGAGAGGT CCTGGACGGCGGCGAGTTCGGGGCCATGGTGGCCGAGTGGGACGCGCTGGAGCGCGACATGCTGCGGGTAAAGGCGCGCC TGCCGGCGGCGGCCAGGGACGCCTATCTGCAGATCGTCGAGCATCCGGTGGCCGCCATGGCCAACCTCTACCGGCTCTAC TACGCGGTCGCCTGGAACCGGCGGCTGGCGGCGATGAACGACCGGCGCGCCAACGCCTTCGCCGACCAGGCCGAGGCGGC GTTCGCCCGCGACCAGGCGCTGACCGAGGCCTACCACCGGGCGAACGGCGGCAAGTGGGACGGGATGATGAGCCAGACCC ACATCGGCTACACGAGCTGGCAGCAGCCGGCGGTGCAGGTGATGCCGAAGGTCGAGCGGGTGACCGGCCGCGGAGAGGCC CGGGCGATCAGGTTCGCCAACGACCCGCGCCCGGCGCCGGGCGTCGTCTCGCGCGAGGCTCCGGACTTCAGCCGCGTGGT GGACGGCGCCGGCGTCGGCTGGCGGGCGATCCCGCACCTGGGGCGGACGAAGGGCGCCGTCGTTACGCTGCCGCAGGGCC GACCGGCCACCACGGCGCGGGACGGGGTGCGCGTGGAGTACGACGTGCAGGTGGCCAAGGCGGGCGACCTGACCGTGCAG CTCTACCTCGCCCCCACCCTGGACACGACGGGCCGCGGATCGCAGCGGATCGGGGTCTCGATCGACGACCGGCCGGTGCA GGTCCTGGTCGACAAGCTGCTGCCGTCGCCCACCGAGACGGTGCTGGAGGAGCAGGCCGCCTGGGACCGCGCGGTGGAGG ATAATGTCCGCGTCCTTGAGGCCGCCTTCACCGACGTCCCCGCCGGGCCGCACGTGATCAAGGTCTGGCGGCTCGACGAC AACATGGTGCTGCAGAAGATCGTCGCTGCGACGGGCCCGATCCCGATCACCTACCTCGGGCCGCCTTGA
Upstream 100 bases:
>100_bases TCTTGGCCTCGGCGCCGCTGCCGGAGACGGGGGCGGTCGACCTGAGGATCGAGGCGCGTGGCGGACGCTACGACTTCGCC TATGCGACGCGGCCGGGGCG
Downstream 100 bases:
>100_bases CCCGGCGGCGGCGCCCGGGATTAGCATTGCGGCGAAGCTCGGGAGATGGGCGGTGCGCAAGTGGATCGTCGCCCTGTTCC TGGCGCTGGCGTCTTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 902; Mature: 902
Protein sequence:
>902_residues MDQPRTGRRRHDPVDPDRRRLRRRHLRPLRLRPGVLMFPISCRALGLAVFAAVLAFGSAASACDTPVSVCATASAGAFPL IRGGTPAAVLVEASADPAVRHAADGFAADLQRVGGRAPARISDPAQARGDLVLVGVLGQSPAIDGLVAAGRLDASGLAGQ WEAFRQVVVERPFPNVPRALVIVGSDRRGAVFGAYDLSEKIGVSPWHWFADAPVERRANVYLTAGARGDQPKVRYRGFFI NDEAPALTTWAEQKFGGANSKMYAHVFELLLRLKGNYLWPAMWQPRAFNDDDPRNMVLADEMGVVMGTSHHEPMTRAHDE WHRNKDGGVTGGRWDYASNGENLRRFWRGGVERMMSKEGGGGYETVVTLGMRGDGDEAMSEETATQLLETIVADQRRIIA DVTGRPPEETPQVWALYKEVQDYYDNGMQVPEDVILLFADDNWGQIRRLPTGDLDRKGGYGVYYHFDYVGAPRNYKWLNN TQVEKTWQQMDLAWRRGARALWIVNVGDIKPMEFPLSFFMAQAWNPEAMTPEALAAYPEDWARRTFGPAQAAEIGELLTR YSKYAARRKPELIDARSFRLGEGAGEVLDGGEFGAMVAEWDALERDMLRVKARLPAAARDAYLQIVEHPVAAMANLYRLY YAVAWNRRLAAMNDRRANAFADQAEAAFARDQALTEAYHRANGGKWDGMMSQTHIGYTSWQQPAVQVMPKVERVTGRGEA RAIRFANDPRPAPGVVSREAPDFSRVVDGAGVGWRAIPHLGRTKGAVVTLPQGRPATTARDGVRVEYDVQVAKAGDLTVQ LYLAPTLDTTGRGSQRIGVSIDDRPVQVLVDKLLPSPTETVLEEQAAWDRAVEDNVRVLEAAFTDVPAGPHVIKVWRLDD NMVLQKIVAATGPIPITYLGPP
Sequences:
>Translated_902_residues MDQPRTGRRRHDPVDPDRRRLRRRHLRPLRLRPGVLMFPISCRALGLAVFAAVLAFGSAASACDTPVSVCATASAGAFPL IRGGTPAAVLVEASADPAVRHAADGFAADLQRVGGRAPARISDPAQARGDLVLVGVLGQSPAIDGLVAAGRLDASGLAGQ WEAFRQVVVERPFPNVPRALVIVGSDRRGAVFGAYDLSEKIGVSPWHWFADAPVERRANVYLTAGARGDQPKVRYRGFFI NDEAPALTTWAEQKFGGANSKMYAHVFELLLRLKGNYLWPAMWQPRAFNDDDPRNMVLADEMGVVMGTSHHEPMTRAHDE WHRNKDGGVTGGRWDYASNGENLRRFWRGGVERMMSKEGGGGYETVVTLGMRGDGDEAMSEETATQLLETIVADQRRIIA DVTGRPPEETPQVWALYKEVQDYYDNGMQVPEDVILLFADDNWGQIRRLPTGDLDRKGGYGVYYHFDYVGAPRNYKWLNN TQVEKTWQQMDLAWRRGARALWIVNVGDIKPMEFPLSFFMAQAWNPEAMTPEALAAYPEDWARRTFGPAQAAEIGELLTR YSKYAARRKPELIDARSFRLGEGAGEVLDGGEFGAMVAEWDALERDMLRVKARLPAAARDAYLQIVEHPVAAMANLYRLY YAVAWNRRLAAMNDRRANAFADQAEAAFARDQALTEAYHRANGGKWDGMMSQTHIGYTSWQQPAVQVMPKVERVTGRGEA RAIRFANDPRPAPGVVSREAPDFSRVVDGAGVGWRAIPHLGRTKGAVVTLPQGRPATTARDGVRVEYDVQVAKAGDLTVQ LYLAPTLDTTGRGSQRIGVSIDDRPVQVLVDKLLPSPTETVLEEQAAWDRAVEDNVRVLEAAFTDVPAGPHVIKVWRLDD NMVLQKIVAATGPIPITYLGPP >Mature_902_residues MDQPRTGRRRHDPVDPDRRRLRRRHLRPLRLRPGVLMFPISCRALGLAVFAAVLAFGSAASACDTPVSVCATASAGAFPL IRGGTPAAVLVEASADPAVRHAADGFAADLQRVGGRAPARISDPAQARGDLVLVGVLGQSPAIDGLVAAGRLDASGLAGQ WEAFRQVVVERPFPNVPRALVIVGSDRRGAVFGAYDLSEKIGVSPWHWFADAPVERRANVYLTAGARGDQPKVRYRGFFI NDEAPALTTWAEQKFGGANSKMYAHVFELLLRLKGNYLWPAMWQPRAFNDDDPRNMVLADEMGVVMGTSHHEPMTRAHDE WHRNKDGGVTGGRWDYASNGENLRRFWRGGVERMMSKEGGGGYETVVTLGMRGDGDEAMSEETATQLLETIVADQRRIIA DVTGRPPEETPQVWALYKEVQDYYDNGMQVPEDVILLFADDNWGQIRRLPTGDLDRKGGYGVYYHFDYVGAPRNYKWLNN TQVEKTWQQMDLAWRRGARALWIVNVGDIKPMEFPLSFFMAQAWNPEAMTPEALAAYPEDWARRTFGPAQAAEIGELLTR YSKYAARRKPELIDARSFRLGEGAGEVLDGGEFGAMVAEWDALERDMLRVKARLPAAARDAYLQIVEHPVAAMANLYRLY YAVAWNRRLAAMNDRRANAFADQAEAAFARDQALTEAYHRANGGKWDGMMSQTHIGYTSWQQPAVQVMPKVERVTGRGEA RAIRFANDPRPAPGVVSREAPDFSRVVDGAGVGWRAIPHLGRTKGAVVTLPQGRPATTARDGVRVEYDVQVAKAGDLTVQ LYLAPTLDTTGRGSQRIGVSIDDRPVQVLVDKLLPSPTETVLEEQAAWDRAVEDNVRVLEAAFTDVPAGPHVIKVWRLDD NMVLQKIVAATGPIPITYLGPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99587; Mature: 99587
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQPRTGRRRHDPVDPDRRRLRRRHLRPLRLRPGVLMFPISCRALGLAVFAAVLAFGSAA CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHCCCC SACDTPVSVCATASAGAFPLIRGGTPAAVLVEASADPAVRHAADGFAADLQRVGGRAPAR CCCCCCHHHHHCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHCHHHHHHHHHCCCCCCC ISDPAQARGDLVLVGVLGQSPAIDGLVAAGRLDASGLAGQWEAFRQVVVERPFPNVPRAL CCCHHHCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEE VIVGSDRRGAVFGAYDLSEKIGVSPWHWFADAPVERRANVYLTAGARGDQPKVRYRGFFI EEEECCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEE NDEAPALTTWAEQKFGGANSKMYAHVFELLLRLKGNYLWPAMWQPRAFNDDDPRNMVLAD CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEC EMGVVMGTSHHEPMTRAHDEWHRNKDGGVTGGRWDYASNGENLRRFWRGGVERMMSKEGG CCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC GGYETVVTLGMRGDGDEAMSEETATQLLETIVADQRRIIADVTGRPPEETPQVWALYKEV CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHH QDYYDNGMQVPEDVILLFADDNWGQIRRLPTGDLDRKGGYGVYYHFDYVGAPRNYKWLNN HHHHHCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCC TQVEKTWQQMDLAWRRGARALWIVNVGDIKPMEFPLSFFMAQAWNPEAMTPEALAAYPED CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCHH WARRTFGPAQAAEIGELLTRYSKYAARRKPELIDARSFRLGEGAGEVLDGGEFGAMVAEW HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHH DALERDMLRVKARLPAAARDAYLQIVEHPVAAMANLYRLYYAVAWNRRLAAMNDRRANAF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHH ADQAEAAFARDQALTEAYHRANGGKWDGMMSQTHIGYTSWQQPAVQVMPKVERVTGRGEA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC RAIRFANDPRPAPGVVSREAPDFSRVVDGAGVGWRAIPHLGRTKGAVVTLPQGRPATTAR EEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCCEEECCCCCCCCCCC DGVRVEYDVQVAKAGDLTVQLYLAPTLDTTGRGSQRIGVSIDDRPVQVLVDKLLPSPTET CCEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCHHH VLEEQAAWDRAVEDNVRVLEAAFTDVPAGPHVIKVWRLDDNMVLQKIVAATGPIPITYLG HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECC PP CC >Mature Secondary Structure MDQPRTGRRRHDPVDPDRRRLRRRHLRPLRLRPGVLMFPISCRALGLAVFAAVLAFGSAA CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHCCCC SACDTPVSVCATASAGAFPLIRGGTPAAVLVEASADPAVRHAADGFAADLQRVGGRAPAR CCCCCCHHHHHCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHCHHHHHHHHHCCCCCCC ISDPAQARGDLVLVGVLGQSPAIDGLVAAGRLDASGLAGQWEAFRQVVVERPFPNVPRAL CCCHHHCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEE VIVGSDRRGAVFGAYDLSEKIGVSPWHWFADAPVERRANVYLTAGARGDQPKVRYRGFFI EEEECCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEE NDEAPALTTWAEQKFGGANSKMYAHVFELLLRLKGNYLWPAMWQPRAFNDDDPRNMVLAD CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEC EMGVVMGTSHHEPMTRAHDEWHRNKDGGVTGGRWDYASNGENLRRFWRGGVERMMSKEGG CCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC GGYETVVTLGMRGDGDEAMSEETATQLLETIVADQRRIIADVTGRPPEETPQVWALYKEV CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHH QDYYDNGMQVPEDVILLFADDNWGQIRRLPTGDLDRKGGYGVYYHFDYVGAPRNYKWLNN HHHHHCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCC TQVEKTWQQMDLAWRRGARALWIVNVGDIKPMEFPLSFFMAQAWNPEAMTPEALAAYPED CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCHH WARRTFGPAQAAEIGELLTRYSKYAARRKPELIDARSFRLGEGAGEVLDGGEFGAMVAEW HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHH DALERDMLRVKARLPAAARDAYLQIVEHPVAAMANLYRLYYAVAWNRRLAAMNDRRANAF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHH ADQAEAAFARDQALTEAYHRANGGKWDGMMSQTHIGYTSWQQPAVQVMPKVERVTGRGEA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC RAIRFANDPRPAPGVVSREAPDFSRVVDGAGVGWRAIPHLGRTKGAVVTLPQGRPATTAR EEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCCEEECCCCCCCCCCC DGVRVEYDVQVAKAGDLTVQLYLAPTLDTTGRGSQRIGVSIDDRPVQVLVDKLLPSPTET CCEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCHHH VLEEQAAWDRAVEDNVRVLEAAFTDVPAGPHVIKVWRLDDNMVLQKIVAATGPIPITYLG HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECC PP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA