| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is aguA [H]
Identifier: 197105936
GI number: 197105936
Start: 2834842
End: 2836965
Strand: Reverse
Name: aguA [H]
Synonym: PHZ_c2475
Alternate gene names: 197105936
Gene position: 2836965-2834842 (Counterclockwise)
Preceding gene: 197105939
Following gene: 197105933
Centisome position: 70.99
GC content: 71.28
Gene sequence:
>2124_bases ATGACCCTTGGTCTGGCCTCGGAGTCCGCCTCGGGGGCCCGGGCCGAGGACGGCTACGACCTGTGGCTGCGCTACCGGCC CGTCGAGGCGCCGGCGGCCGGGGCCTACCGGGCCGCGGCGTCCGAGCTGGTGGTCCAGGGCGGCTCTCCGACGCTGGCGG TGGCGCGCGACGAGCTGGCGCGCGGCCTTTCGGGCATGCTGGGCCAGGCGCCGCCGCTGGCCGCGGCGCCGGGTCGCGAC GGGACGGTGATCCTGGGCACGCCGGCGGGCTCGCCGCTGGTGGCGCGCCTGAACCTGCCGCTGGAGCCCCTTGGCCCCGA CGGCTACCTGATCCGCAGCGTGCAGGTGGACGGCCGGCCCGCGACAGTGATCGCGGGCAACAGCGACGTCGGCGTCCTCT ACGGCGTGTTCGATTTCCTGCGGCGGATGCAGACGCGCCAGCCCGTGGCGGGCCTCGAGGTGGCCGAGGCGCCGAAGGTG AAGCTGCGCCTGCTGAACCACTGGGACAACCTCGACCGCCACGTCGAGCGGGGCTACTCGGGCCAGTCCATCTGGGACTG GTGGAGGCTGCCCGACGTCCGCGATCCACGCTACGTGGACTACGCCCGCGCCAGCGCCTCGCTGGGGATCAACGGGACCG TCCTCAACAACGTCAACGCCAAGGCCGACAGCCTGACGGCGCCCTATATCGCCAAGGCCGCGGCGGTGGCCGACGTGCTG CGGCCCTACGGGATCAAGGTCTATCTCTCGGCTAGGTTCAGCGCCCCGATCGAGATCGGCGGGCTGAAGACCGCCGACCC GCTGGACCCGGCCGTCCGCGCCTGGTGGAAGGCCAAGGCCGACGAGATCTACCGGACGATCCCGGACTTCGGCGGCTTCC TGGTGAAGGCCAACTCCGAGGGCCAGCCGGGGCCGCAGGACTACGGCCGCAGCCACGCCGACGGCGCCAACATGCTGGCC GAGGCGGTGGCGCCGCACGGCGGCGTCGTGATGTGGCGGGCCTTCGTCTATTCGAACGAGCAGCCCGAGGACCGCATCAA GCAGGCCTACAACGAGTTCGTCCCCCTGAACGGCAAGTTCCGCGACAACGTCATCGTGCAGGTGAAGAACGGGCCGCTGG ACTTCCAGCCGCGCGAGCCGTTCCACCCCCTGTTCGGGGCCACCCCGAAGACGCCGCTGATGATGGAATTCCAGATCACC AAGGAATACCTCGGCTTCTCTACCCACCTCGTCTACCAGGGCCCGCTCTACGAGGAGACGCTGGCCGCCGACACCTGGCG CAAGGGGCAGGGCTCCACCGTCGCCAAGGTGGTGGACGGCTCGCTCTTCGGCCACGCGCTCACCGGCATGGCCGGCGTGG CCAACGTCGGCTCGGACCGCAACTGGTCGGGCTCGCACTTCGACCAGGCCAACTGGTACGCCTTCGGTCGCCTCGCCTGG GACCCGGAACTGTCCTCGCGGGCGATCGCGCAGGAGTGGGCGCGGATGACGTTCTCGAACGATCCCCGCTTCCTGGAGCC GGTGGTCGGGATGATGATCGCCTCGCGCGAGACGGTGGTGGACTACATGACCCCGCTCGGCCTGCACCACCTGATGGGCG AGGGGCACCACTACGGTCCGGCCCCGTGGGTGGCCGGCGGGCCGCGGGCGGACTGGACCTCGGTCTACTTCCACCGCGCT TCGCCCGAGGGGATCGGCTTCGACCGCATGGCGAGCGGCAGCAACGCCGTGGCCCAGTACGCCCCCGAGGCGGGCCGGGC GCTCGCCGCCGACGAGAAGAACCTGCTGTGGTTCCACCGCGTCCCCTGGGACCAGCGGGTGAGCTCGGGCCGCACGCTGT GGGACGAGCTGGTGGTCCGCTACACGAAGGGCGTGGAGGAGGTTTCGGCGATGCGCCGCACCTGGGCGTCCATGAAGCCC TACGTGGACCCGCAGCGCCACGCCGAGGTGGCCGCCTACCTCGCCGTCCAGGAGCAGGAGGCGCAGTGGTGGCGCGACGC CTGCATCGCCTACTTCCAGACCTTCTCGAAGCGCCCGCTGCCGGCCGGCTACGCCCCGCCCGCCCATTCGCTGGACTATT ACCGCTCGCTCGAATTCCCCTACGCCCCGGGCCGCGGAGACTGA
Upstream 100 bases:
>100_bases CTCGGGCCCGGTGTTGTCAATCACATGGTCAGACCACTAGAAGGGTGGTGTCTGGACCTCTGGAGGCGGCATGAAGAAGT TCGCACTGCTCGCGTCGGCG
Downstream 100 bases:
>100_bases TCCTCGCCCCTGGCCGCGCCTCGGCCCCGCGGGGGAGGGGCGCGGTCGCGGCGTTCCTCCCAGGCAAAAGGAAAGGGCGG CCGGCCTTTCGGCCCGCCGC
Product: alpha-glucuronidase
Products: NA
Alternate protein names: Alpha-glucosiduronase [H]
Number of amino acids: Translated: 707; Mature: 706
Protein sequence:
>707_residues MTLGLASESASGARAEDGYDLWLRYRPVEAPAAGAYRAAASELVVQGGSPTLAVARDELARGLSGMLGQAPPLAAAPGRD GTVILGTPAGSPLVARLNLPLEPLGPDGYLIRSVQVDGRPATVIAGNSDVGVLYGVFDFLRRMQTRQPVAGLEVAEAPKV KLRLLNHWDNLDRHVERGYSGQSIWDWWRLPDVRDPRYVDYARASASLGINGTVLNNVNAKADSLTAPYIAKAAAVADVL RPYGIKVYLSARFSAPIEIGGLKTADPLDPAVRAWWKAKADEIYRTIPDFGGFLVKANSEGQPGPQDYGRSHADGANMLA EAVAPHGGVVMWRAFVYSNEQPEDRIKQAYNEFVPLNGKFRDNVIVQVKNGPLDFQPREPFHPLFGATPKTPLMMEFQIT KEYLGFSTHLVYQGPLYEETLAADTWRKGQGSTVAKVVDGSLFGHALTGMAGVANVGSDRNWSGSHFDQANWYAFGRLAW DPELSSRAIAQEWARMTFSNDPRFLEPVVGMMIASRETVVDYMTPLGLHHLMGEGHHYGPAPWVAGGPRADWTSVYFHRA SPEGIGFDRMASGSNAVAQYAPEAGRALAADEKNLLWFHRVPWDQRVSSGRTLWDELVVRYTKGVEEVSAMRRTWASMKP YVDPQRHAEVAAYLAVQEQEAQWWRDACIAYFQTFSKRPLPAGYAPPAHSLDYYRSLEFPYAPGRGD
Sequences:
>Translated_707_residues MTLGLASESASGARAEDGYDLWLRYRPVEAPAAGAYRAAASELVVQGGSPTLAVARDELARGLSGMLGQAPPLAAAPGRD GTVILGTPAGSPLVARLNLPLEPLGPDGYLIRSVQVDGRPATVIAGNSDVGVLYGVFDFLRRMQTRQPVAGLEVAEAPKV KLRLLNHWDNLDRHVERGYSGQSIWDWWRLPDVRDPRYVDYARASASLGINGTVLNNVNAKADSLTAPYIAKAAAVADVL RPYGIKVYLSARFSAPIEIGGLKTADPLDPAVRAWWKAKADEIYRTIPDFGGFLVKANSEGQPGPQDYGRSHADGANMLA EAVAPHGGVVMWRAFVYSNEQPEDRIKQAYNEFVPLNGKFRDNVIVQVKNGPLDFQPREPFHPLFGATPKTPLMMEFQIT KEYLGFSTHLVYQGPLYEETLAADTWRKGQGSTVAKVVDGSLFGHALTGMAGVANVGSDRNWSGSHFDQANWYAFGRLAW DPELSSRAIAQEWARMTFSNDPRFLEPVVGMMIASRETVVDYMTPLGLHHLMGEGHHYGPAPWVAGGPRADWTSVYFHRA SPEGIGFDRMASGSNAVAQYAPEAGRALAADEKNLLWFHRVPWDQRVSSGRTLWDELVVRYTKGVEEVSAMRRTWASMKP YVDPQRHAEVAAYLAVQEQEAQWWRDACIAYFQTFSKRPLPAGYAPPAHSLDYYRSLEFPYAPGRGD >Mature_706_residues TLGLASESASGARAEDGYDLWLRYRPVEAPAAGAYRAAASELVVQGGSPTLAVARDELARGLSGMLGQAPPLAAAPGRDG TVILGTPAGSPLVARLNLPLEPLGPDGYLIRSVQVDGRPATVIAGNSDVGVLYGVFDFLRRMQTRQPVAGLEVAEAPKVK LRLLNHWDNLDRHVERGYSGQSIWDWWRLPDVRDPRYVDYARASASLGINGTVLNNVNAKADSLTAPYIAKAAAVADVLR PYGIKVYLSARFSAPIEIGGLKTADPLDPAVRAWWKAKADEIYRTIPDFGGFLVKANSEGQPGPQDYGRSHADGANMLAE AVAPHGGVVMWRAFVYSNEQPEDRIKQAYNEFVPLNGKFRDNVIVQVKNGPLDFQPREPFHPLFGATPKTPLMMEFQITK EYLGFSTHLVYQGPLYEETLAADTWRKGQGSTVAKVVDGSLFGHALTGMAGVANVGSDRNWSGSHFDQANWYAFGRLAWD PELSSRAIAQEWARMTFSNDPRFLEPVVGMMIASRETVVDYMTPLGLHHLMGEGHHYGPAPWVAGGPRADWTSVYFHRAS PEGIGFDRMASGSNAVAQYAPEAGRALAADEKNLLWFHRVPWDQRVSSGRTLWDELVVRYTKGVEEVSAMRRTWASMKPY VDPQRHAEVAAYLAVQEQEAQWWRDACIAYFQTFSKRPLPAGYAPPAHSLDYYRSLEFPYAPGRGD
Specific function: Releases 4-O-methylglucuronic acid from substituted xylo-oligosaccharides [H]
COG id: COG3661
COG function: function code G; Alpha-glucuronidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 67 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011395 - InterPro: IPR005154 - InterPro: IPR011099 - InterPro: IPR011100 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF07477 Glyco_hydro_67C; PF07488 Glyco_hydro_67M; PF03648 Glyco_hydro_67N [H]
EC number: =3.2.1.139 [H]
Molecular weight: Translated: 77716; Mature: 77585
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLGLASESASGARAEDGYDLWLRYRPVEAPAAGAYRAAASELVVQGGSPTLAVARDELA CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHEEECCCCEEEEEHHHHH RGLSGMLGQAPPLAAAPGRDGTVILGTPAGSPLVARLNLPLEPLGPDGYLIRSVQVDGRP HHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCC ATVIAGNSDVGVLYGVFDFLRRMQTRQPVAGLEVAEAPKVKLRLLNHWDNLDRHVERGYS EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC GQSIWDWWRLPDVRDPRYVDYARASASLGINGTVLNNVNAKADSLTAPYIAKAAAVADVL CCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHH RPYGIKVYLSARFSAPIEIGGLKTADPLDPAVRAWWKAKADEIYRTIPDFGGFLVKANSE CCCCEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC GQPGPQDYGRSHADGANMLAEAVAPHGGVVMWRAFVYSNEQPEDRIKQAYNEFVPLNGKF CCCCCHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEHHCCCCHHHHHHHHHHHCCCCCCCC RDNVIVQVKNGPLDFQPREPFHPLFGATPKTPLMMEFQITKEYLGFSTHLVYQGPLYEET CCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEHHHHHCCEEEEEEECCCHHHH LAADTWRKGQGSTVAKVVDGSLFGHALTGMAGVANVGSDRNWSGSHFDQANWYAFGRLAW HHHHCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEE DPELSSRAIAQEWARMTFSNDPRFLEPVVGMMIASRETVVDYMTPLGLHHLMGEGHHYGP CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC APWVAGGPRADWTSVYFHRASPEGIGFDRMASGSNAVAQYAPEAGRALAADEKNLLWFHR CCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHCCCCCCEEECCCCCEEEEEE VPWDQRVSSGRTLWDELVVRYTKGVEEVSAMRRTWASMKPYVDPQRHAEVAAYLAVQEQE CCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH AQWWRDACIAYFQTFSKRPLPAGYAPPAHSLDYYRSLEFPYAPGRGD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure TLGLASESASGARAEDGYDLWLRYRPVEAPAAGAYRAAASELVVQGGSPTLAVARDELA CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHEEECCCCEEEEEHHHHH RGLSGMLGQAPPLAAAPGRDGTVILGTPAGSPLVARLNLPLEPLGPDGYLIRSVQVDGRP HHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCC ATVIAGNSDVGVLYGVFDFLRRMQTRQPVAGLEVAEAPKVKLRLLNHWDNLDRHVERGYS EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC GQSIWDWWRLPDVRDPRYVDYARASASLGINGTVLNNVNAKADSLTAPYIAKAAAVADVL CCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHH RPYGIKVYLSARFSAPIEIGGLKTADPLDPAVRAWWKAKADEIYRTIPDFGGFLVKANSE CCCCEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC GQPGPQDYGRSHADGANMLAEAVAPHGGVVMWRAFVYSNEQPEDRIKQAYNEFVPLNGKF CCCCCHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEHHCCCCHHHHHHHHHHHCCCCCCCC RDNVIVQVKNGPLDFQPREPFHPLFGATPKTPLMMEFQITKEYLGFSTHLVYQGPLYEET CCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEHHHHHCCEEEEEEECCCHHHH LAADTWRKGQGSTVAKVVDGSLFGHALTGMAGVANVGSDRNWSGSHFDQANWYAFGRLAW HHHHCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEE DPELSSRAIAQEWARMTFSNDPRFLEPVVGMMIASRETVVDYMTPLGLHHLMGEGHHYGP CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC APWVAGGPRADWTSVYFHRASPEGIGFDRMASGSNAVAQYAPEAGRALAADEKNLLWFHR CCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHCCCCCCEEECCCCCEEEEEE VPWDQRVSSGRTLWDELVVRYTKGVEEVSAMRRTWASMKPYVDPQRHAEVAAYLAVQEQE CCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH AQWWRDACIAYFQTFSKRPLPAGYAPPAHSLDYYRSLEFPYAPGRGD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9044261; 10360571 [H]