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The map label for this gene is yfiO [C]

Identifier: 197105773

GI number: 197105773

Start: 2620184

End: 2621101

Strand: Reverse

Name: yfiO [C]

Synonym: PHZ_c2311

Alternate gene names: 197105773

Gene position: 2621101-2620184 (Counterclockwise)

Preceding gene: 197105774

Following gene: 197105772

Centisome position: 65.59

GC content: 69.06

Gene sequence:

>918_bases
GTGTCTTCGGTTCGAACGTCTACCCGGGTGGTCCTCGTCGCCGCCGCCTGCGCGCTCGCCCTCGGCGCCTGCGCCGGCAA
CAAGAAGAAGCCGCGCCTGGTCTATGAGGAGCGGCCGGTCGAGCTGCTCTACGCGACCGGCGCCAACCGGCTGGACCGCG
GCCTGTGGAACCAGGCCATCAACTACTTCCAGGAAGTCGAGCGGCAGCACCCCTATTCGGAGTGGTCGCGCCGTTCCATC
CTGATGCAGGCCTACGCCCACTATCAGTCGAACGACTATCCCGAGGCGATCGGCGACGCCGACCGGTTCATCCAGCTCTA
TCCGGGCAACCCGGCGGCGGCCTACGCCCACTACATCAAGGCCATCTGCTACTTCGAACAGATCGTCGACGTGGGCCGCG
ACCAGGCCGCGACCGGCCAGGCGCTGGAGGCGCTGCGCGCGGTGGTGCAGCGCTATCCGGCCAGCGAATATGCCCAGGAC
GCGCGCCTGAAGATCGACATGGTCAACGACCAGCTCGCCGGCAAGGAGATGACCGTCGGCCGCTGGTACCTGCGCAACGG
CGACACCCTGGCGGCCGTGAACCGGTTCAAGACCGTGGTCGACCGCTATCAGACCACCACCCACACGCCCGAGGCGCTCT
ATCGCCTGGTCGAGGCGTACCTGACGCTCGGCCTCACGGAAGAGGCCAAGCGCAACGGGGCGGTGCTGGGCTACAACTAT
CCGGGCGATCCCTGGTACCGCGACGCCTACCGGCTGCTGACCGACAAGGGCCTGCGCCCGGCGGTCGAGCCCGAGAGCGG
CGGCCGCAGGGGCCTGCTGCGCCTGCCGTTCCGCAAGGACAAGGGCCAGACCATCAAGCCGCCCGCGCCGGAGGCCTCGG
CCACCGACGCGGCCGCCACCGCGCCAGAGCCGAAATAG

Upstream 100 bases:

>100_bases
TGGCCGAGGCGGTCTGACGCGCCGCCGTTTGCTCGCCACAGTCGGTGGTGTAGAAGCGACTCTCTCGCGTGGGGGCGCGC
GTGTTGGTCTTGAGGTGAAG

Downstream 100 bases:

>100_bases
GGCTTTCGCGCTTCCGCGGCGGCGGGGCGGAACAAATCGCGTCCTTCGCCTCTTCAACCGCGCCTGATTCCGGGCGATGT
TCCCTGCGATGCTGATCGGC

Product: DNA uptake lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSSVRTSTRVVLVAAACALALGACAGNKKKPRLVYEERPVELLYATGANRLDRGLWNQAINYFQEVERQHPYSEWSRRSI
LMQAYAHYQSNDYPEAIGDADRFIQLYPGNPAAAYAHYIKAICYFEQIVDVGRDQAATGQALEALRAVVQRYPASEYAQD
ARLKIDMVNDQLAGKEMTVGRWYLRNGDTLAAVNRFKTVVDRYQTTTHTPEALYRLVEAYLTLGLTEEAKRNGAVLGYNY
PGDPWYRDAYRLLTDKGLRPAVEPESGGRRGLLRLPFRKDKGQTIKPPAPEASATDAAATAPEPK

Sequences:

>Translated_305_residues
MSSVRTSTRVVLVAAACALALGACAGNKKKPRLVYEERPVELLYATGANRLDRGLWNQAINYFQEVERQHPYSEWSRRSI
LMQAYAHYQSNDYPEAIGDADRFIQLYPGNPAAAYAHYIKAICYFEQIVDVGRDQAATGQALEALRAVVQRYPASEYAQD
ARLKIDMVNDQLAGKEMTVGRWYLRNGDTLAAVNRFKTVVDRYQTTTHTPEALYRLVEAYLTLGLTEEAKRNGAVLGYNY
PGDPWYRDAYRLLTDKGLRPAVEPESGGRRGLLRLPFRKDKGQTIKPPAPEASATDAAATAPEPK
>Mature_304_residues
SSVRTSTRVVLVAAACALALGACAGNKKKPRLVYEERPVELLYATGANRLDRGLWNQAINYFQEVERQHPYSEWSRRSIL
MQAYAHYQSNDYPEAIGDADRFIQLYPGNPAAAYAHYIKAICYFEQIVDVGRDQAATGQALEALRAVVQRYPASEYAQDA
RLKIDMVNDQLAGKEMTVGRWYLRNGDTLAAVNRFKTVVDRYQTTTHTPEALYRLVEAYLTLGLTEEAKRNGAVLGYNYP
GDPWYRDAYRLLTDKGLRPAVEPESGGRRGLLRLPFRKDKGQTIKPPAPEASATDAAATAPEPK

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=244, Percent_Identity=27.4590163934426, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34141; Mature: 34010

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVRTSTRVVLVAAACALALGACAGNKKKPRLVYEERPVELLYATGANRLDRGLWNQAI
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHH
NYFQEVERQHPYSEWSRRSILMQAYAHYQSNDYPEAIGDADRFIQLYPGNPAAAYAHYIK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHEEEEECCCHHHHHHHHHH
AICYFEQIVDVGRDQAATGQALEALRAVVQRYPASEYAQDARLKIDMVNDQLAGKEMTVG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCHHCCCEEEEC
RWYLRNGDTLAAVNRFKTVVDRYQTTTHTPEALYRLVEAYLTLGLTEEAKRNGAVLGYNY
EEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCEEEECC
PGDPWYRDAYRLLTDKGLRPAVEPESGGRRGLLRLPFRKDKGQTIKPPAPEASATDAAAT
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
APEPK
CCCCC
>Mature Secondary Structure 
SSVRTSTRVVLVAAACALALGACAGNKKKPRLVYEERPVELLYATGANRLDRGLWNQAI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHH
NYFQEVERQHPYSEWSRRSILMQAYAHYQSNDYPEAIGDADRFIQLYPGNPAAAYAHYIK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHEEEEECCCHHHHHHHHHH
AICYFEQIVDVGRDQAATGQALEALRAVVQRYPASEYAQDARLKIDMVNDQLAGKEMTVG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCHHCCCEEEEC
RWYLRNGDTLAAVNRFKTVVDRYQTTTHTPEALYRLVEAYLTLGLTEEAKRNGAVLGYNY
EEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCEEEECC
PGDPWYRDAYRLLTDKGLRPAVEPESGGRRGLLRLPFRKDKGQTIKPPAPEASATDAAAT
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
APEPK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]