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The map label for this gene is rsmC [H]

Identifier: 197105763

GI number: 197105763

Start: 2606722

End: 2607636

Strand: Reverse

Name: rsmC [H]

Synonym: PHZ_c2301

Alternate gene names: 197105763

Gene position: 2607636-2606722 (Counterclockwise)

Preceding gene: 197105765

Following gene: 197105762

Centisome position: 65.25

GC content: 74.64

Gene sequence:

>915_bases
TTGAGCCCGTCTCCGGTCTCCGCCGTCTATGGCCTGCCGCCGCCGGAGCTCGCGCCTGCGCCGGCCGGCGCGGTGCAGGT
CTCCCCGCTGATCCCCGGCTCGGCGGCCCTGGAGGACATCGCGCCGGCCAGCCTGGAGAGCGTGACGGTCGCCGCCCCGC
CCGGGACGATCGAGCGTCGCTACGTCCTGGCCCTGGCCCTGCGGGCGCTGGCGCCGGGCGGGCGGCTCACCGCTCTCGCG
CCCAAGGAGAAGGGCGGCTCGCGCCTCGGCAAGGAGCTGAAGGCGTTCGGCTGCGAGGTCCACGAGACAGGCCAGCGCCA
CCAGCGCATCTGCCAGACCCGCCGGCCGGACGCGCCCGCCGGCCTGGAGGCGGCGATCGAGGCGGGACGGCCGCGGTTCT
CGGAGAGCCTCGGCCTGTGGACGCAGCCCGGGGTGTTCAGCTGGGATCGCCCCGACCCCGGCAGCGTCCTGCTCATCCAG
GCGCTCCCGCCGCTGGCGGGACGCGGCGCCGACCTGGGCTGCGGGCTCGGCATCCTGTCCCACGCCGTCCTGGCCAGTCC
GCAGGTGACCGAGCTTGCGCTGGTGGACCTCGACCGTCGGGCGGTGGACTGCGCCCGGCGCAACGTCCAGGATTCGCGCG
CCGGCTTCCACTGGCGGGACGCCCGCACCGGCCCGGAGCTCGCCGGGCTCGATTTCGTGGTGATGAACCCGCCGTTCCAT
GACGCAGGCGCTGAGGACAAGGCGCTGGGCCAGGCGTTCATCCGCCGCGCCCACGCCGTGCTCCGCAAGGGCGGCGTCCT
GTGGCTGGTGGCCAACCGGCACCTGCCGTACGAGGGCGTCCTGGGCGACCTGTTCGGCAAGGCCGCGCTGAAGGCCGAAG
GTGGAGGCTTCAAGGTGTACGAGGCGCGGAAATGA

Upstream 100 bases:

>100_bases
CCCCGGTGTTCGCGCTGCGTTCCCGCCGCTGGACGTGCGCCGCCCCGCCCGGTATCGCCCTCCGGCCGCCAGCGTCGCGC
GGTCAGGGAGTTGCCGCCGC

Downstream 100 bases:

>100_bases
GCGGCTCGGTCCGCCTCGACAAGCTGCTGGCCAACATGGGCTATGGCTCGCGCCGGGAGGTGCAGGCGCTGGCCCGCGCC
GGGGCCATCACCCTGGACGG

Product: ribosomal RNA small subunit methyltransferase C

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSPSPVSAVYGLPPPELAPAPAGAVQVSPLIPGSAALEDIAPASLESVTVAAPPGTIERRYVLALALRALAPGGRLTALA
PKEKGGSRLGKELKAFGCEVHETGQRHQRICQTRRPDAPAGLEAAIEAGRPRFSESLGLWTQPGVFSWDRPDPGSVLLIQ
ALPPLAGRGADLGCGLGILSHAVLASPQVTELALVDLDRRAVDCARRNVQDSRAGFHWRDARTGPELAGLDFVVMNPPFH
DAGAEDKALGQAFIRRAHAVLRKGGVLWLVANRHLPYEGVLGDLFGKAALKAEGGGFKVYEARK

Sequences:

>Translated_304_residues
MSPSPVSAVYGLPPPELAPAPAGAVQVSPLIPGSAALEDIAPASLESVTVAAPPGTIERRYVLALALRALAPGGRLTALA
PKEKGGSRLGKELKAFGCEVHETGQRHQRICQTRRPDAPAGLEAAIEAGRPRFSESLGLWTQPGVFSWDRPDPGSVLLIQ
ALPPLAGRGADLGCGLGILSHAVLASPQVTELALVDLDRRAVDCARRNVQDSRAGFHWRDARTGPELAGLDFVVMNPPFH
DAGAEDKALGQAFIRRAHAVLRKGGVLWLVANRHLPYEGVLGDLFGKAALKAEGGGFKVYEARK
>Mature_303_residues
SPSPVSAVYGLPPPELAPAPAGAVQVSPLIPGSAALEDIAPASLESVTVAAPPGTIERRYVLALALRALAPGGRLTALAP
KEKGGSRLGKELKAFGCEVHETGQRHQRICQTRRPDAPAGLEAAIEAGRPRFSESLGLWTQPGVFSWDRPDPGSVLLIQA
LPPLAGRGADLGCGLGILSHAVLASPQVTELALVDLDRRAVDCARRNVQDSRAGFHWRDARTGPELAGLDFVVMNPPFHD
AGAEDKALGQAFIRRAHAVLRKGGVLWLVANRHLPYEGVLGDLFGKAALKAEGGGFKVYEARK

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=170, Percent_Identity=37.6470588235294, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87082206, Length=175, Percent_Identity=32.5714285714286, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 32012; Mature: 31881

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSPVSAVYGLPPPELAPAPAGAVQVSPLIPGSAALEDIAPASLESVTVAAPPGTIERR
CCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCCCEEEEECCCCCHHHH
YVLALALRALAPGGRLTALAPKEKGGSRLGKELKAFGCEVHETGQRHQRICQTRRPDAPA
HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
GLEAAIEAGRPRFSESLGLWTQPGVFSWDRPDPGSVLLIQALPPLAGRGADLGCGLGILS
CHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH
HAVLASPQVTELALVDLDRRAVDCARRNVQDSRAGFHWRDARTGPELAGLDFVVMNPPFH
HHHHCCCCCCEEEEECCCHHHHHHHHHCCHHHHCCCEECCCCCCCCCCCCEEEEECCCCC
DAGAEDKALGQAFIRRAHAVLRKGGVLWLVANRHLPYEGVLGDLFGKAALKAEGGGFKVY
CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHEEECCCCEEEE
EARK
ECCC
>Mature Secondary Structure 
SPSPVSAVYGLPPPELAPAPAGAVQVSPLIPGSAALEDIAPASLESVTVAAPPGTIERR
CCCCCCEEECCCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCCCEEEEECCCCCHHHH
YVLALALRALAPGGRLTALAPKEKGGSRLGKELKAFGCEVHETGQRHQRICQTRRPDAPA
HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
GLEAAIEAGRPRFSESLGLWTQPGVFSWDRPDPGSVLLIQALPPLAGRGADLGCGLGILS
CHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH
HAVLASPQVTELALVDLDRRAVDCARRNVQDSRAGFHWRDARTGPELAGLDFVVMNPPFH
HHHHCCCCCCEEEEECCCHHHHHHHHHCCHHHHCCCEECCCCCCCCCCCCEEEEECCCCC
DAGAEDKALGQAFIRRAHAVLRKGGVLWLVANRHLPYEGVLGDLFGKAALKAEGGGFKVY
CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHEEECCCCEEEE
EARK
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA