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The map label for this gene is ygdD [C]

Identifier: 197105737

GI number: 197105737

Start: 2577822

End: 2578163

Strand: Direct

Name: ygdD [C]

Synonym: PHZ_c2275

Alternate gene names: 197105737

Gene position: 2577822-2578163 (Clockwise)

Preceding gene: 197105736

Following gene: 197105739

Centisome position: 64.51

GC content: 75.44

Gene sequence:

>342_bases
ATGCCGGCCGCGCTCGCCCTCGCCGCCCTGCTGGGGCTGGCCTGCGTCGGTTTCGGGGCCTTCGGGGCGCACGGGGTCGC
CGACCCCAAGGCCCAGGAGTGGCTGCGGACCGGAGCGCTCTACGGCTTCGTCCACGTGCTGGCGGTGTTCGCCGCAGACC
GCTACGGCGCGCGGCTGGCGCCGCCGCTGTACCTGTTCGGCGTCCTCGTCTTCTCGGGCTCGCTGTTCGCCATGGCGCTG
GGCGCGCCGCGCTGGCTGGGCGCGATCACGCCGATCGGCGGCGTCAGCTTCATGGCCGGATGGGCCGCCCTCGCCTGGGC
GGTGGCGCGCCGCCAAACCTGA

Upstream 100 bases:

>100_bases
TCAGCGGCCGCTTCGCCGACGAGGCGACCCTGTTCCGCCTCGCCGCCCAGCTCGAGAAGGAGGCCCCGTGGAAGGACCGC
CGCCCGCAGGTGTCGGGCTG

Downstream 100 bases:

>100_bases
AGGCCGCCAGACCTGAGAGCTGTCAGACCTGAGGGCCGGGCTTCAGGGCCAGCTTCCTCAGCGCCACGGCCGAACCGACA
AGCGCGACCAGCATCACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPAALALAALLGLACVGFGAFGAHGVADPKAQEWLRTGALYGFVHVLAVFAADRYGARLAPPLYLFGVLVFSGSLFAMAL
GAPRWLGAITPIGGVSFMAGWAALAWAVARRQT

Sequences:

>Translated_113_residues
MPAALALAALLGLACVGFGAFGAHGVADPKAQEWLRTGALYGFVHVLAVFAADRYGARLAPPLYLFGVLVFSGSLFAMAL
GAPRWLGAITPIGGVSFMAGWAALAWAVARRQT
>Mature_112_residues
PAALALAALLGLACVGFGAFGAHGVADPKAQEWLRTGALYGFVHVLAVFAADRYGARLAPPLYLFGVLVFSGSLFAMALG
APRWLGAITPIGGVSFMAGWAALAWAVARRQT

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 11662; Mature: 11531

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAALALAALLGLACVGFGAFGAHGVADPKAQEWLRTGALYGFVHVLAVFAADRYGARLA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PPLYLFGVLVFSGSLFAMALGAPRWLGAITPIGGVSFMAGWAALAWAVARRQT
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAALALAALLGLACVGFGAFGAHGVADPKAQEWLRTGALYGFVHVLAVFAADRYGARLA
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PPLYLFGVLVFSGSLFAMALGAPRWLGAITPIGGVSFMAGWAALAWAVARRQT
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]