| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is pckG [H]
Identifier: 197105694
GI number: 197105694
Start: 2524706
End: 2526556
Strand: Reverse
Name: pckG [H]
Synonym: PHZ_c2232
Alternate gene names: 197105694
Gene position: 2526556-2524706 (Counterclockwise)
Preceding gene: 197105701
Following gene: 197105690
Centisome position: 63.22
GC content: 68.45
Gene sequence:
>1851_bases ATGAGCCAACCCACCGTCCCGGGACTTGCGCCCGCGCCGACGAAGCACGCCAAGCTGGTCCAATGGGTCGGCGAGATCGC CGAGCTGACCCAGCCCGACCGCGTGGTCTGGTGCGACGGGTCGGAAGAGGAGTGGAACCGGCTGACCGAAGAGCTGGTCG CCGCAGGCACCCTCAAGCGCCTCAATCCGGACAAGCGTCCGAACTCGTTCTACGCCGCCTCGGACCCGCGCGACGTCGCC CGCGTCGAGAGCCGCACGTTCATCTGCTCGGAGAAGCAGGAGGACGCCGGTCCGACCAACAACTGGCTCGACCCCACCGA GATGCGGGCCGACCTGAAGGACCTGTTCAAGGGCGTGATGCGCGGCCGCACCATGTACGTGGTGCCCTTCTGCATGGGCC CGCTCGGCTCGAAGATCAGCGCCATCGGCGTCGAGATCACCGATTCCGCCTACGTGGCCGTATCGATGCGGATCATGACG CGGATGGGCCAGGCCGCCCTCGACCAGCTCGGCGAGGACGGCTTTTTCGTTCCTGCGGTCCACTCGGTGGGCATGCCGCT GGTCGACGGGGCCAAGGACGTCGCCTGGCCGTGCAACGAGATCAAGTACATCGTCCACTTCCCCGAGACCCGCGAGATCT GGTCCTACGGCTCGGGCTACGGCGGCAACGCGCTGCTGGGCAAGAAGTGCTTCGCGCTGCGCATCGCCTCGGTCATGGCC CGTGACGAGGGCTGGTTCGCCGAGCACATGCTGATCCTGAAGCTGACCTCGCCCGAGGGGCAGGTCCGCTACATCGCCGC GGCCTTCCCCAGCGCCTGCGGCAAGACCAACATGGCCATGCTGCAGCCGACGCTGGCCGGCTGGAAGGCCGAGACGATCG GCGACGACATCTGCTGGATGCGCTTCGGCGACGACGGACGCCTCTATGCGGTCAACCCCGAGGCGGGCTTCTTCGGCGTG GCGCCGGGCACGGGCGTCAACACCAACCAGAACGCCATCGCCACGCTGCATTCGAACTGCATCTTCACCAACGTCGCGCT CACCGAGGACGGCGACGTCTGGTGGGAAGGCCTGACCGACGAGCCGCCGGCGCGCCTGATCGACTGGAAGGGCCGTCCGT GGACGCCCGACAGCGACGAGCCCGCCGCGCACCCGAACGCCCGCTTCACGGTTCCGGCCTCGCAGTGCCCGGTCGCCGCG CCCGAGTGGGAGGACCCGGCGGGCGTGCCGATCTCGGCCATCCTGTTCGGCGGCCGTCGGGCGTCGGCCGTGCCGCTGGT CACCGAGGCGCGCGACTGGACCCACGGCGTATTCATGGCCTCGAACGTCGCCTCGGAAGGCACCGCCGCCGCCGAGAACA AGATCGGCGAACTGCGCCGCGATCCCTTCGCCATGCTGCCCTTCTGCGGCTACAACATGGGCGACTACTTCGGCCACTGG CTGGCCATGGGCGAGCAGGCCGATCCGGCCAAGCTGCCGCGGATCTACTTCGTGAACTGGTTCCGCAAGGACGAGCGGGG CAAGTTCGTCTGGCCGGGCTTCGGCGACAACTCGCGGGTCCTGAAGTGGATCGTCGAGCGGCTGGAGGGCAAGGCCGACG CCGTGGACACCCCGATCGGTCGCGTGCCGTCGAAGACGAGCCTGGACCTGTCGGGTCTGACCCTCAGCGACCAGCAGCTC GACCTGCTGCTGACGGTGGATCCCGCGATCTGGGGCCAGGAAGCGGCCCTCATCCCCGATTTCTACCAGCGGTTCGGCGA GCATTTGCCGAAGGCGCTGTGGGGCGAGTACGAGGCGCTGGTGAAGCGCCTCGAGGAAGCTGCGCCCAAGCAGGTCGTCG CCGCCGAATAG
Upstream 100 bases:
>100_bases TAGGCAGACGCGCTTTCCGCCGTTAAGGAGTTGCTCACGTGTAAGGAGCGTGCGGGGCGTCTGCCGCACGCGCCGAGTTG GGGCCAGGGAGTTTTCGTCT
Downstream 100 bases:
>100_bases GCGCGGCGGCCACCCTCCGGACGACGAAGGCCGCGGGTCACCCCGCGGCCTTTTCGTTTCAGGCCTTCCCGTCGCCGGGC GGCTCGACCTGGCTGGAGAA
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 616; Mature: 615
Protein sequence:
>616_residues MSQPTVPGLAPAPTKHAKLVQWVGEIAELTQPDRVVWCDGSEEEWNRLTEELVAAGTLKRLNPDKRPNSFYAASDPRDVA RVESRTFICSEKQEDAGPTNNWLDPTEMRADLKDLFKGVMRGRTMYVVPFCMGPLGSKISAIGVEITDSAYVAVSMRIMT RMGQAALDQLGEDGFFVPAVHSVGMPLVDGAKDVAWPCNEIKYIVHFPETREIWSYGSGYGGNALLGKKCFALRIASVMA RDEGWFAEHMLILKLTSPEGQVRYIAAAFPSACGKTNMAMLQPTLAGWKAETIGDDICWMRFGDDGRLYAVNPEAGFFGV APGTGVNTNQNAIATLHSNCIFTNVALTEDGDVWWEGLTDEPPARLIDWKGRPWTPDSDEPAAHPNARFTVPASQCPVAA PEWEDPAGVPISAILFGGRRASAVPLVTEARDWTHGVFMASNVASEGTAAAENKIGELRRDPFAMLPFCGYNMGDYFGHW LAMGEQADPAKLPRIYFVNWFRKDERGKFVWPGFGDNSRVLKWIVERLEGKADAVDTPIGRVPSKTSLDLSGLTLSDQQL DLLLTVDPAIWGQEAALIPDFYQRFGEHLPKALWGEYEALVKRLEEAAPKQVVAAE
Sequences:
>Translated_616_residues MSQPTVPGLAPAPTKHAKLVQWVGEIAELTQPDRVVWCDGSEEEWNRLTEELVAAGTLKRLNPDKRPNSFYAASDPRDVA RVESRTFICSEKQEDAGPTNNWLDPTEMRADLKDLFKGVMRGRTMYVVPFCMGPLGSKISAIGVEITDSAYVAVSMRIMT RMGQAALDQLGEDGFFVPAVHSVGMPLVDGAKDVAWPCNEIKYIVHFPETREIWSYGSGYGGNALLGKKCFALRIASVMA RDEGWFAEHMLILKLTSPEGQVRYIAAAFPSACGKTNMAMLQPTLAGWKAETIGDDICWMRFGDDGRLYAVNPEAGFFGV APGTGVNTNQNAIATLHSNCIFTNVALTEDGDVWWEGLTDEPPARLIDWKGRPWTPDSDEPAAHPNARFTVPASQCPVAA PEWEDPAGVPISAILFGGRRASAVPLVTEARDWTHGVFMASNVASEGTAAAENKIGELRRDPFAMLPFCGYNMGDYFGHW LAMGEQADPAKLPRIYFVNWFRKDERGKFVWPGFGDNSRVLKWIVERLEGKADAVDTPIGRVPSKTSLDLSGLTLSDQQL DLLLTVDPAIWGQEAALIPDFYQRFGEHLPKALWGEYEALVKRLEEAAPKQVVAAE >Mature_615_residues SQPTVPGLAPAPTKHAKLVQWVGEIAELTQPDRVVWCDGSEEEWNRLTEELVAAGTLKRLNPDKRPNSFYAASDPRDVAR VESRTFICSEKQEDAGPTNNWLDPTEMRADLKDLFKGVMRGRTMYVVPFCMGPLGSKISAIGVEITDSAYVAVSMRIMTR MGQAALDQLGEDGFFVPAVHSVGMPLVDGAKDVAWPCNEIKYIVHFPETREIWSYGSGYGGNALLGKKCFALRIASVMAR DEGWFAEHMLILKLTSPEGQVRYIAAAFPSACGKTNMAMLQPTLAGWKAETIGDDICWMRFGDDGRLYAVNPEAGFFGVA PGTGVNTNQNAIATLHSNCIFTNVALTEDGDVWWEGLTDEPPARLIDWKGRPWTPDSDEPAAHPNARFTVPASQCPVAAP EWEDPAGVPISAILFGGRRASAVPLVTEARDWTHGVFMASNVASEGTAAAENKIGELRRDPFAMLPFCGYNMGDYFGHWL AMGEQADPAKLPRIYFVNWFRKDERGKFVWPGFGDNSRVLKWIVERLEGKADAVDTPIGRVPSKTSLDLSGLTLSDQQLD LLLTVDPAIWGQEAALIPDFYQRFGEHLPKALWGEYEALVKRLEEAAPKQVVAAE
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI66346721, Length=599, Percent_Identity=53.9232053422371, Blast_Score=624, Evalue=1e-179, Organism=Homo sapiens, GI187281517, Length=594, Percent_Identity=52.8619528619529, Blast_Score=616, Evalue=1e-176, Organism=Homo sapiens, GI66346723, Length=368, Percent_Identity=54.8913043478261, Blast_Score=394, Evalue=1e-109, Organism=Caenorhabditis elegans, GI71989645, Length=605, Percent_Identity=50.5785123966942, Blast_Score=597, Evalue=1e-171, Organism=Caenorhabditis elegans, GI71989658, Length=605, Percent_Identity=50.5785123966942, Blast_Score=595, Evalue=1e-170, Organism=Caenorhabditis elegans, GI71989653, Length=591, Percent_Identity=50.761421319797, Blast_Score=584, Evalue=1e-167, Organism=Caenorhabditis elegans, GI17555492, Length=614, Percent_Identity=47.8827361563518, Blast_Score=553, Evalue=1e-158, Organism=Caenorhabditis elegans, GI32564411, Length=541, Percent_Identity=50.6469500924214, Blast_Score=534, Evalue=1e-152, Organism=Caenorhabditis elegans, GI32564407, Length=522, Percent_Identity=50.5747126436782, Blast_Score=507, Evalue=1e-144, Organism=Caenorhabditis elegans, GI71989649, Length=545, Percent_Identity=48.0733944954128, Blast_Score=502, Evalue=1e-142, Organism=Caenorhabditis elegans, GI32564409, Length=368, Percent_Identity=48.6413043478261, Blast_Score=342, Evalue=3e-94, Organism=Caenorhabditis elegans, GI17540956, Length=523, Percent_Identity=25.2390057361377, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI24655085, Length=597, Percent_Identity=52.5963149078727, Blast_Score=631, Evalue=0.0, Organism=Drosophila melanogaster, GI24655082, Length=600, Percent_Identity=52.3333333333333, Blast_Score=609, Evalue=1e-174, Organism=Drosophila melanogaster, GI161077226, Length=556, Percent_Identity=53.4172661870504, Blast_Score=584, Evalue=1e-167, Organism=Drosophila melanogaster, GI24655088, Length=503, Percent_Identity=54.0755467196819, Blast_Score=561, Evalue=1e-160,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 67787; Mature: 67655
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00505 PEPCK_GTP ; PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPTVPGLAPAPTKHAKLVQWVGEIAELTQPDRVVWCDGSEEEWNRLTEELVAAGTLKR CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH LNPDKRPNSFYAASDPRDVARVESRTFICSEKQEDAGPTNNWLDPTEMRADLKDLFKGVM CCCCCCCCCEECCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RGRTMYVVPFCMGPLGSKISAIGVEITDSAYVAVSMRIMTRMGQAALDQLGEDGFFVPAV CCCEEEEEEEECCCCCCCEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEHHH HSVGMPLVDGAKDVAWPCNEIKYIVHFPETREIWSYGSGYGGNALLGKKCFALRIASVMA HHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH RDEGWFAEHMLILKLTSPEGQVRYIAAAFPSACGKTNMAMLQPTLAGWKAETIGDDICWM CCCCCCEEEEEEEEEECCCCCEEEEEECCCHHCCCCCHHHCCHHHCCCCCCCCCCCEEEE RFGDDGRLYAVNPEAGFFGVAPGTGVNTNQNAIATLHSNCIFTNVALTEDGDVWWEGLTD EECCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCEEECCCCC EPPARLIDWKGRPWTPDSDEPAAHPNARFTVPASQCPVAAPEWEDPAGVPISAILFGGRR CCCCCEEECCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCCEEEEEECCCC ASAVPLVTEARDWTHGVFMASNVASEGTAAAENKIGELRRDPFAMLPFCGYNMGDYFGHW CCCCCEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHH LAMGEQADPAKLPRIYFVNWFRKDERGKFVWPGFGDNSRVLKWIVERLEGKADAVDTPIG HHCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC RVPSKTSLDLSGLTLSDQQLDLLLTVDPAIWGQEAALIPDFYQRFGEHLPKALWGEYEAL CCCCCCCCEECCEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VKRLEEAAPKQVVAAE HHHHHHHCCCCEECCC >Mature Secondary Structure SQPTVPGLAPAPTKHAKLVQWVGEIAELTQPDRVVWCDGSEEEWNRLTEELVAAGTLKR CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH LNPDKRPNSFYAASDPRDVARVESRTFICSEKQEDAGPTNNWLDPTEMRADLKDLFKGVM CCCCCCCCCEECCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RGRTMYVVPFCMGPLGSKISAIGVEITDSAYVAVSMRIMTRMGQAALDQLGEDGFFVPAV CCCEEEEEEEECCCCCCCEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEHHH HSVGMPLVDGAKDVAWPCNEIKYIVHFPETREIWSYGSGYGGNALLGKKCFALRIASVMA HHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH RDEGWFAEHMLILKLTSPEGQVRYIAAAFPSACGKTNMAMLQPTLAGWKAETIGDDICWM CCCCCCEEEEEEEEEECCCCCEEEEEECCCHHCCCCCHHHCCHHHCCCCCCCCCCCEEEE RFGDDGRLYAVNPEAGFFGVAPGTGVNTNQNAIATLHSNCIFTNVALTEDGDVWWEGLTD EECCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCEEECCCCC EPPARLIDWKGRPWTPDSDEPAAHPNARFTVPASQCPVAAPEWEDPAGVPISAILFGGRR CCCCCEEECCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCCEEEEEECCCC ASAVPLVTEARDWTHGVFMASNVASEGTAAAENKIGELRRDPFAMLPFCGYNMGDYFGHW CCCCCEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHH LAMGEQADPAKLPRIYFVNWFRKDERGKFVWPGFGDNSRVLKWIVERLEGKADAVDTPIG HHCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC RVPSKTSLDLSGLTLSDQQLDLLLTVDPAIWGQEAALIPDFYQRFGEHLPKALWGEYEAL CCCCCCCCEECCEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VKRLEEAAPKQVVAAE HHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA