| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105638
Identifier: 197105638
GI number: 197105638
Start: 2454969
End: 2456783
Strand: Reverse
Name: 197105638
Synonym: PHZ_c2175
Alternate gene names: NA
Gene position: 2456783-2454969 (Counterclockwise)
Preceding gene: 197105639
Following gene: 197105629
Centisome position: 61.48
GC content: 75.65
Gene sequence:
>1815_bases GTGCGCCGGACCGGCTTCCTCGCCATGTGGCGGCCGCCCGCCGTCCAGGAGCCGTCGACGCAGGTCCTGGCGGCGATCGA GGGCTCGGCCGCCTGGCGGTGCGTGGCGCGCCTGCCAAGGCTCACCGTCTGGACGGACCGGAGCGGCGCGCTGCCGGTGC GTGTGCTCCCCAGGGGCGGGGGTGTCGTCCTCGGCGATCTGCTGTCGTCCACGGGCGGCCCGACCCATCCCTGCGAGGAC CCCTCGGTGGCTTGGGAGGACCCGGTGCGGGCGGCGCGCCACCTCTGCGCCGTCGGCTGGGGCGCCTACGCCGTGATCCT GCTCGATCCCCGGGGCGGGGCGGGGCTGTTCCGGGACCCCGGCGGCCAGCTCGGAGCCTACGCCTGGACCCTTCGCACAG GGGAGGTGGTCATCGCCTCGGATCCCGTGCGCACGCCGGCCGCCGTGTCGCCGCCCCGCCTGGCGATCGACTGGGAGCGC GTCCGGCGCTTCACCGCGGCGCCGAGCGCGGCCAGCGACCTGCCGTTGTTGGACGGAATCCAGGGGGCCTGTCCCGGCCA GATCGCCTGGTTGCACGTCCCCGGCGTCTCGCCGACGACGATCTGGACGCCCGCCGACTTCGTCTCCCGGGATAGACGGA ATCCGACCCCGGCCGAGGCGCTGGTCCGGCGCGTGGACCGCGCCGTCAGCGGCTTGGTCGGGTCCCACGACCGGGTTGTG GTGGAGGTCTCGGGCGGCCTGGACTCGGCCATCGTCGCGACGGCGATCGCCGCCACGGGGGAGGCCGGGCGGGTGGCGGC TTGGCTCAACTGTGTCGGCGCCGAGCGGGAGGCGGACGAACGCACCTACGCGGCGGCGGTGGCCCGTCGGGCCGGGGGCG AGCTGCAGACGTTCGCGCGTCGGGCGCGGCCGCTCGACCTCGAGGAGATCGAGGAGCTCGCCCTGGACGTCTGGCCGACC ATGGCGGCCATCGAACCGGACCGCGACCGGGCGGAGCTGGATGTCGTCCGACGGCTCGGGGCGACGGCGATCGTCTCGGG GGAGGGGGGCGACGCGGCCTTCTACCAGATGCCGAGCGAGGCGATCTTCGCCGACGCCCTGCGCGACCTCGGCCCACGCG CCTTCCGCTCGCCCCTCCTGGCGAATGTCGCCCGCCGCACCCGGCGCTCCGTGTGGGGCGTCCTGGCGAGAGCGAGGCGA CGCGACCTCGCGTCGCCCGCTGGACGGGTCTCGCCCTATGTCGTGGACGCGCCGGACGTGGGCGCGCACCCGTGGGTCCG CGCGGCGGAGGCGGCCGACGCGCCTCCCGGCAAGCGCCTCCAGATCCTCGCCCTGTCCACGCTGCATCTGCATCAGGCCG ACAGCCGCCGGCGTGCAGCGGCCGACATGCTCTTTCCGCTGTTCTCGCAGCCGGTGATGGAGCTCTGCCTCTCCATCCCG AGCTATGAGCTCGCCGGGGAGGGCTACGACCGTCCGCTGGCGCGCCGGGCCTTCGCCGGCCGCCTGCCGCCGGAGGTGGT CGCCCGCCGTGGCAAGGGCGACCACACCGTGCACTACGCGCACGTCGTCGCGCGCAACCTCGACCTGCTCCGCCCCTACC TGCTGGAGGGGACGCTCTGCGCGGCGGGTGTCCTCGACCGCCCGGCCCTCGAGCATGCGCTCGCCAGCGAGCGCCTCATC TGGGGCGAGCGGCCGGCGTCGATCCTGTGGGCGACGGCGGTGGAGGCGTGGGCCCGGGCGTGGCGGCGGCGGGTTCCCGA CGCGTCACCGGCCCCGCGCGGGCGGGCGTCTTCAGGTGCGCATCGAGGAAGGTGA
Upstream 100 bases:
>100_bases TGGCCCTTCCGCGCGCACTGCTGGCTGCAATGGGGCGACGTCGCGCTCGACGACGTCCCGGAACGCCTCCAGGCGTTCGA GCCGATCCTGGTGACCTGAC
Downstream 100 bases:
>100_bases ACAGCCTGGCGTAGTAGTCCCGCACGTTGCCCGGGCTGGCGAGCCCGTGGCCCTCGCCCCAGTAGACGACCAGCTGCGCG TCCTTGCCCTGCCTGAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Asparagine Synthetase
Number of amino acids: Translated: 604; Mature: 604
Protein sequence:
>604_residues MRRTGFLAMWRPPAVQEPSTQVLAAIEGSAAWRCVARLPRLTVWTDRSGALPVRVLPRGGGVVLGDLLSSTGGPTHPCED PSVAWEDPVRAARHLCAVGWGAYAVILLDPRGGAGLFRDPGGQLGAYAWTLRTGEVVIASDPVRTPAAVSPPRLAIDWER VRRFTAAPSAASDLPLLDGIQGACPGQIAWLHVPGVSPTTIWTPADFVSRDRRNPTPAEALVRRVDRAVSGLVGSHDRVV VEVSGGLDSAIVATAIAATGEAGRVAAWLNCVGAEREADERTYAAAVARRAGGELQTFARRARPLDLEEIEELALDVWPT MAAIEPDRDRAELDVVRRLGATAIVSGEGGDAAFYQMPSEAIFADALRDLGPRAFRSPLLANVARRTRRSVWGVLARARR RDLASPAGRVSPYVVDAPDVGAHPWVRAAEAADAPPGKRLQILALSTLHLHQADSRRRAAADMLFPLFSQPVMELCLSIP SYELAGEGYDRPLARRAFAGRLPPEVVARRGKGDHTVHYAHVVARNLDLLRPYLLEGTLCAAGVLDRPALEHALASERLI WGERPASILWATAVEAWARAWRRRVPDASPAPRGRASSGAHRGR
Sequences:
>Translated_604_residues MRRTGFLAMWRPPAVQEPSTQVLAAIEGSAAWRCVARLPRLTVWTDRSGALPVRVLPRGGGVVLGDLLSSTGGPTHPCED PSVAWEDPVRAARHLCAVGWGAYAVILLDPRGGAGLFRDPGGQLGAYAWTLRTGEVVIASDPVRTPAAVSPPRLAIDWER VRRFTAAPSAASDLPLLDGIQGACPGQIAWLHVPGVSPTTIWTPADFVSRDRRNPTPAEALVRRVDRAVSGLVGSHDRVV VEVSGGLDSAIVATAIAATGEAGRVAAWLNCVGAEREADERTYAAAVARRAGGELQTFARRARPLDLEEIEELALDVWPT MAAIEPDRDRAELDVVRRLGATAIVSGEGGDAAFYQMPSEAIFADALRDLGPRAFRSPLLANVARRTRRSVWGVLARARR RDLASPAGRVSPYVVDAPDVGAHPWVRAAEAADAPPGKRLQILALSTLHLHQADSRRRAAADMLFPLFSQPVMELCLSIP SYELAGEGYDRPLARRAFAGRLPPEVVARRGKGDHTVHYAHVVARNLDLLRPYLLEGTLCAAGVLDRPALEHALASERLI WGERPASILWATAVEAWARAWRRRVPDASPAPRGRASSGAHRGR >Mature_604_residues MRRTGFLAMWRPPAVQEPSTQVLAAIEGSAAWRCVARLPRLTVWTDRSGALPVRVLPRGGGVVLGDLLSSTGGPTHPCED PSVAWEDPVRAARHLCAVGWGAYAVILLDPRGGAGLFRDPGGQLGAYAWTLRTGEVVIASDPVRTPAAVSPPRLAIDWER VRRFTAAPSAASDLPLLDGIQGACPGQIAWLHVPGVSPTTIWTPADFVSRDRRNPTPAEALVRRVDRAVSGLVGSHDRVV VEVSGGLDSAIVATAIAATGEAGRVAAWLNCVGAEREADERTYAAAVARRAGGELQTFARRARPLDLEEIEELALDVWPT MAAIEPDRDRAELDVVRRLGATAIVSGEGGDAAFYQMPSEAIFADALRDLGPRAFRSPLLANVARRTRRSVWGVLARARR RDLASPAGRVSPYVVDAPDVGAHPWVRAAEAADAPPGKRLQILALSTLHLHQADSRRRAAADMLFPLFSQPVMELCLSIP SYELAGEGYDRPLARRAFAGRLPPEVVARRGKGDHTVHYAHVVARNLDLLRPYLLEGTLCAAGVLDRPALEHALASERLI WGERPASILWATAVEAWARAWRRRVPDASPAPRGRASSGAHRGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64970; Mature: 64970
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTGFLAMWRPPAVQEPSTQVLAAIEGSAAWRCVARLPRLTVWTDRSGALPVRVLPRGG CCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCCEEEEECCCC GVVLGDLLSSTGGPTHPCEDPSVAWEDPVRAARHLCAVGWGAYAVILLDPRGGAGLFRDP CEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC GGQLGAYAWTLRTGEVVIASDPVRTPAAVSPPRLAIDWERVRRFTAAPSAASDLPLLDGI CCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCC QGACPGQIAWLHVPGVSPTTIWTPADFVSRDRRNPTPAEALVRRVDRAVSGLVGSHDRVV CCCCCCCEEEEEECCCCCCEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE VEVSGGLDSAIVATAIAATGEAGRVAAWLNCVGAEREADERTYAAAVARRAGGELQTFAR EEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH RARPLDLEEIEELALDVWPTMAAIEPDRDRAELDVVRRLGATAIVSGEGGDAAFYQMPSE HCCCCCHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCHH AIFADALRDLGPRAFRSPLLANVARRTRRSVWGVLARARRRDLASPAGRVSPYVVDAPDV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC GAHPWVRAAEAADAPPGKRLQILALSTLHLHQADSRRRAAADMLFPLFSQPVMELCLSIP CCCCCHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SYELAGEGYDRPLARRAFAGRLPPEVVARRGKGDHTVHYAHVVARNLDLLRPYLLEGTLC CCEECCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHH AAGVLDRPALEHALASERLIWGERPASILWATAVEAWARAWRRRVPDASPAPRGRASSGA HHHCCCCHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC HRGR CCCC >Mature Secondary Structure MRRTGFLAMWRPPAVQEPSTQVLAAIEGSAAWRCVARLPRLTVWTDRSGALPVRVLPRGG CCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCCEEEEECCCC GVVLGDLLSSTGGPTHPCEDPSVAWEDPVRAARHLCAVGWGAYAVILLDPRGGAGLFRDP CEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC GGQLGAYAWTLRTGEVVIASDPVRTPAAVSPPRLAIDWERVRRFTAAPSAASDLPLLDGI CCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCC QGACPGQIAWLHVPGVSPTTIWTPADFVSRDRRNPTPAEALVRRVDRAVSGLVGSHDRVV CCCCCCCEEEEEECCCCCCEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE VEVSGGLDSAIVATAIAATGEAGRVAAWLNCVGAEREADERTYAAAVARRAGGELQTFAR EEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH RARPLDLEEIEELALDVWPTMAAIEPDRDRAELDVVRRLGATAIVSGEGGDAAFYQMPSE HCCCCCHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCHH AIFADALRDLGPRAFRSPLLANVARRTRRSVWGVLARARRRDLASPAGRVSPYVVDAPDV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC GAHPWVRAAEAADAPPGKRLQILALSTLHLHQADSRRRAAADMLFPLFSQPVMELCLSIP CCCCCHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SYELAGEGYDRPLARRAFAGRLPPEVVARRGKGDHTVHYAHVVARNLDLLRPYLLEGTLC CCEECCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHH AAGVLDRPALEHALASERLIWGERPASILWATAVEAWARAWRRRVPDASPAPRGRASSGA HHHCCCCHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC HRGR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA