Click here to switch to the map view.

The map label for this gene is exoF [H]

Identifier: 197105629

GI number: 197105629

Start: 2440838

End: 2441401

Strand: Reverse

Name: exoF [H]

Synonym: PHZ_c2166

Alternate gene names: 197105629

Gene position: 2441401-2440838 (Counterclockwise)

Preceding gene: 197105638

Following gene: 197105627

Centisome position: 61.09

GC content: 65.96

Gene sequence:

>564_bases
ATGAAGACCATCGTCGGGCTGCTCGTGGCCGCAGCCCTCATCGCCGTCGGGGCGTTGCTTCCGGCCCAGGCGTTCGCCCA
GAAGTCCGAATCCACCCGCGAAGTGCCGGAGTACCGCCTGGGATCGGGCGACAAGATCCGCGTCCTGACCTACGGCGAGG
CCTCCCTGACCGGTGAGTTCCAAGTCGGCGGATCGGGCAAGGTGTCGCTGCCGCTGATCGGCGAAGTGGAGGCCGCCGGA
CTCACCGCCCGCGAGTTCCAGGATCGGGTCGAGGCCGCGCTCAAGGACGGCTACTTGAAGGAGCCGCGGGTCAGCGTCGA
GGTGCTGAACTATCGGCCTTTTTATATTTTGGGCGAGGTGAACCGGCCGGGCGAGTACCCCTACACCAACGGGCTGACGG
TGCTGAACGCCGTCGCCACCGCCGAGGGCTTCACCTATCGGGCCAACAAGAACAAGGTGTTCATCAAGCGCGCCGACGGG
GACGAGGAGGAATCCTTCCCCCTGACCAGCACCACCCAGGTCGCGCCCGGCGACACCATCCGCATCGGCGAACGGTTCTT
CTAG

Upstream 100 bases:

>100_bases
TGGGTTGCGGCAGGGCGCGCGCGCCGGGTATTTCGTGCGGAGCCCCCGTGAAGTACAAAGCCCGGGTTCGAGGGGACCGC
GCGTGCGGGAGCGTTGCTTC

Downstream 100 bases:

>100_bases
CGGCTTCGCTCTACGCCTTGATGATGTGTTCGCCCTGGACGCCGTGGCGGGCCATGGCGTTGCGGGTGTCCACGACCAGC
GGGGCCTCGGCGAGGAGGCG

Product: polysaccharide export periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKTIVGLLVAAALIAVGALLPAQAFAQKSESTREVPEYRLGSGDKIRVLTYGEASLTGEFQVGGSGKVSLPLIGEVEAAG
LTAREFQDRVEAALKDGYLKEPRVSVEVLNYRPFYILGEVNRPGEYPYTNGLTVLNAVATAEGFTYRANKNKVFIKRADG
DEEESFPLTSTTQVAPGDTIRIGERFF

Sequences:

>Translated_187_residues
MKTIVGLLVAAALIAVGALLPAQAFAQKSESTREVPEYRLGSGDKIRVLTYGEASLTGEFQVGGSGKVSLPLIGEVEAAG
LTAREFQDRVEAALKDGYLKEPRVSVEVLNYRPFYILGEVNRPGEYPYTNGLTVLNAVATAEGFTYRANKNKVFIKRADG
DEEESFPLTSTTQVAPGDTIRIGERFF
>Mature_187_residues
MKTIVGLLVAAALIAVGALLPAQAFAQKSESTREVPEYRLGSGDKIRVLTYGEASLTGEFQVGGSGKVSLPLIGEVEAAG
LTAREFQDRVEAALKDGYLKEPRVSVEVLNYRPFYILGEVNRPGEYPYTNGLTVLNAVATAEGFTYRANKNKVFIKRADG
DEEESFPLTSTTQVAPGDTIRIGERFF

Specific function: Involved in succinoglycan (EPS I) synthesis. Needed for the addition of the first sugar (galactose) to the isoprenoid carrier [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787218, Length=135, Percent_Identity=31.1111111111111, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 20252; Mature: 20252

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIVGLLVAAALIAVGALLPAQAFAQKSESTREVPEYRLGSGDKIRVLTYGEASLTGEF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEEECCCCEEEEE
QVGGSGKVSLPLIGEVEAAGLTAREFQDRVEAALKDGYLKEPRVSVEVLNYRPFYILGEV
EECCCCEEEECEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECC
NRPGEYPYTNGLTVLNAVATAEGFTYRANKNKVFIKRADGDEEESFPLTSTTQVAPGDTI
CCCCCCCCCCCHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCEECCCCEE
RIGERFF
ECCCCCC
>Mature Secondary Structure
MKTIVGLLVAAALIAVGALLPAQAFAQKSESTREVPEYRLGSGDKIRVLTYGEASLTGEF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEEECCCCEEEEE
QVGGSGKVSLPLIGEVEAAGLTAREFQDRVEAALKDGYLKEPRVSVEVLNYRPFYILGEV
EECCCCEEEECEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECC
NRPGEYPYTNGLTVLNAVATAEGFTYRANKNKVFIKRADGDEEESFPLTSTTQVAPGDTI
CCCCCCCCCCCHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCEECCCCEE
RIGERFF
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8439670; 11481431 [H]