| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is fecR [H]
Identifier: 197105635
GI number: 197105635
Start: 2448415
End: 2449392
Strand: Direct
Name: fecR [H]
Synonym: PHZ_c2172
Alternate gene names: 197105635
Gene position: 2448415-2449392 (Clockwise)
Preceding gene: 197105634
Following gene: 197105636
Centisome position: 61.27
GC content: 78.63
Gene sequence:
>978_bases ATGACCGATCAGGCGGAGCTCTCGCGGGCGGAGGCGGAGGCGGCCGAATGGTTCGAGCGGCTGCGCCGGCCGGCCGTGAC GACCCGCGCCCTTAGGGATTTCCACGCCTGGAAGCGGTCCGAAGTGAACGCGGCGGCCTTCCGGCGGGTGGAGGCCGGCT GGCGGGCGACCGGGGCCCTGGTCGGCGATCCGGAGGTGCAGGCGGCGGCGCGGGAGGTCCTGGCGCGGCGGCCGCTGCGG CGCCGGCGCGACTGGCGGCAGATCCTGGCGCCGGTGGCGGCGGGCGGGGCCCTGGGCCTAGTGCTGCTCGGGGCCTGGGT CGACCGGGCCCTGATCCCCGCCTACCGCACGGGCGTCGGCGAGCAGCGGTTGGTGGTGCTCGAGGACGGCTCGCGGGTGC GGCTGAACACCGACAGCGCCGTGCGGGTGGCCTACTGGGGCGATGCGCGGCGGGTCTTCCTGCGGCGGGGCCAGGCGTTC TTCGAGGTGGCGCACGATCCGGCCCGCCCCTTTCGGGTGGACGCCGGCGAGGCGGAGGTGCGCGCGCTCGGCACCCGGTT CGACGTGCGGCGGGAGGCGGACGGCGTGGCCGTCACCCTGCTGGAAGGGCGGGTGCGGGTGGAGGACGACCGCGGCGAGG CGGCCGACCTCGAGCCGCGACAGCAGCTGCGGGTGACCGACGCGGGCCTGGGCCGCGTGCGGCCGGCCGCGCCCGAGGCG GCGAGCTGGACCACCGGTCGGCTGGTGTTCCACGACGCCCCGCTGGCGGCGGCGATCGCCGAGGCCAACCGCTATTCGGC GCGCAAGGTGGAGCTCGTGGGCGCGCCGCGGCTGGCGGCGGAGCCGGTGAGCGGGGTGTTCGACGCCGGCGACGTGGAGG CCTTCGCCGCGGCGGTGGCCGAGGCGTACGGCCTGCGCCGCACGGCGGGGCCGGCCGGGGCGATCCGCCTGGCGCCGGCG GCGGGCGCCGCGGGCTGA
Upstream 100 bases:
>100_bases GGAGCGGTGCGGGATCTCGGTCAAGCGCGTGGAGGCGCGGATGACCGAGGCCCACAAGCGCTTCGCCGCCCTGATGCGGG ATTAGCGGCGGCGCTTTGGC
Downstream 100 bases:
>100_bases CAGATATTTCCGAGGGTGTTTGGCGTCTTCTTCCGACTCCACCCCATGACGACGGAATTGGCCGTGTTCGGCCGGGCTGC TGTGGCCCGGCGGGCCCTCA
Product: probable FecR, iron siderophore sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTDQAELSRAEAEAAEWFERLRRPAVTTRALRDFHAWKRSEVNAAAFRRVEAGWRATGALVGDPEVQAAAREVLARRPLR RRRDWRQILAPVAAGGALGLVLLGAWVDRALIPAYRTGVGEQRLVVLEDGSRVRLNTDSAVRVAYWGDARRVFLRRGQAF FEVAHDPARPFRVDAGEAEVRALGTRFDVRREADGVAVTLLEGRVRVEDDRGEAADLEPRQQLRVTDAGLGRVRPAAPEA ASWTTGRLVFHDAPLAAAIAEANRYSARKVELVGAPRLAAEPVSGVFDAGDVEAFAAAVAEAYGLRRTAGPAGAIRLAPA AGAAG
Sequences:
>Translated_325_residues MTDQAELSRAEAEAAEWFERLRRPAVTTRALRDFHAWKRSEVNAAAFRRVEAGWRATGALVGDPEVQAAAREVLARRPLR RRRDWRQILAPVAAGGALGLVLLGAWVDRALIPAYRTGVGEQRLVVLEDGSRVRLNTDSAVRVAYWGDARRVFLRRGQAF FEVAHDPARPFRVDAGEAEVRALGTRFDVRREADGVAVTLLEGRVRVEDDRGEAADLEPRQQLRVTDAGLGRVRPAAPEA ASWTTGRLVFHDAPLAAAIAEANRYSARKVELVGAPRLAAEPVSGVFDAGDVEAFAAAVAEAYGLRRTAGPAGAIRLAPA AGAAG >Mature_324_residues TDQAELSRAEAEAAEWFERLRRPAVTTRALRDFHAWKRSEVNAAAFRRVEAGWRATGALVGDPEVQAAAREVLARRPLRR RRDWRQILAPVAAGGALGLVLLGAWVDRALIPAYRTGVGEQRLVVLEDGSRVRLNTDSAVRVAYWGDARRVFLRRGQAFF EVAHDPARPFRVDAGEAEVRALGTRFDVRREADGVAVTLLEGRVRVEDDRGEAADLEPRQQLRVTDAGLGRVRPAAPEAA SWTTGRLVFHDAPLAAAIAEANRYSARKVELVGAPRLAAEPVSGVFDAGDVEAFAAAVAEAYGLRRTAGPAGAIRLAPAA GAAG
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=208, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 35146; Mature: 35015
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQAELSRAEAEAAEWFERLRRPAVTTRALRDFHAWKRSEVNAAAFRRVEAGWRATGAL CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCE VGDPEVQAAAREVLARRPLRRRRDWRQILAPVAAGGALGLVLLGAWVDRALIPAYRTGVG ECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC EQRLVVLEDGSRVRLNTDSAVRVAYWGDARRVFLRRGQAFFEVAHDPARPFRVDAGEAEV CCEEEEEECCCEEEECCCCEEEEEEECCHHHHHHHCCHHHHHHHCCCCCCEEECCCCHHH RALGTRFDVRREADGVAVTLLEGRVRVEDDRGEAADLEPRQQLRVTDAGLGRVRPAAPEA HHHCCHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCCHHHHEEECCCCCCCCCCCCCCC ASWTTGRLVFHDAPLAAAIAEANRYSARKVELVGAPRLAAEPVSGVFDAGDVEAFAAAVA CCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH EAYGLRRTAGPAGAIRLAPAAGAAG HHHCCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure TDQAELSRAEAEAAEWFERLRRPAVTTRALRDFHAWKRSEVNAAAFRRVEAGWRATGAL CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCE VGDPEVQAAAREVLARRPLRRRRDWRQILAPVAAGGALGLVLLGAWVDRALIPAYRTGVG ECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC EQRLVVLEDGSRVRLNTDSAVRVAYWGDARRVFLRRGQAFFEVAHDPARPFRVDAGEAEV CCEEEEEECCCEEEECCCCEEEEEEECCHHHHHHHCCHHHHHHHCCCCCCEEECCCCHHH RALGTRFDVRREADGVAVTLLEGRVRVEDDRGEAADLEPRQQLRVTDAGLGRVRPAAPEA HHHCCHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCCHHHHEEECCCCCCCCCCCCCCC ASWTTGRLVFHDAPLAAAIAEANRYSARKVELVGAPRLAAEPVSGVFDAGDVEAFAAAVA CCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH EAYGLRRTAGPAGAIRLAPAAGAAG HHHCCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]