Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197105632

Identifier: 197105632

GI number: 197105632

Start: 2444425

End: 2445207

Strand: Direct

Name: 197105632

Synonym: PHZ_c2169

Alternate gene names: NA

Gene position: 2444425-2445207 (Clockwise)

Preceding gene: 197105631

Following gene: 197105633

Centisome position: 61.17

GC content: 69.35

Gene sequence:

>783_bases
GTGGGTGGCAGCGAGACCGACGCCAACGACGCCGAGGCGATCTGCGAGGCGGTGACGCGGCCGACGATGCGGTTCGTGGC
GATCAAGTCCGAGCAGCAGCAGGCGGCCCTGGCGCTGCACCGGACCCGAGATCTGCTGGTCAAGCAGCGCACCCAGCTGG
TCAACATGATCCGCGGCCTCCTGGCTGAGTTTGGGATCGAGATGGCGCGCGGCCTGCATCATGCCCTCGACCTAGCCGCA
CGGGTTGCTCAAGGCGCTGCGCCGGACGTGCCCGAGCTGGCGGCGCGAGTCATCACCGGCCTGGCGGGCCAGATCGGCGA
TCTGCAGGTCCGTCTCACGGCGCTGGAGAAGGAGCTGCTGACCTGGCATCGGACAAACGAGCTGTCTCAGCGCCTCAGCA
CCATCCCTGGCGTCGGCCTGATCTCGGCCACGGCGCTTGCCGCCTCAGTCACCGACGCCAGCCGCTTCCGCTCCGGGCGG
CAGTTTGCGGCCTCGCTTGGCCTAACACCGCTGCAGAACTCCAGCGGCGGCAAGGAGCGGATGGGGAGGATCTCACGGAT
GGGCGATCGATATCTGAGACGCCTGCTGGTCGTCGGCATGACCTCGCTCGTGCGCCGTGCACGAACAAGACCGGACTCGG
TCGACCCGCGCATCGCTGCGATGCTGGCGCGCAAACCCGCTCGCGTGGTGACGGTGGCCGCGGCCAATCGCACCGCCCGT
GTCGCCTGGTCGATCATGGCCCGCGGCGGCGTCTACCGCGCGCCTCAGGGCGTGACCGCCTGA

Upstream 100 bases:

>100_bases
TGTGGCGGCCTGGCGGATCCGCTTCGCCCTCGAGCACTGGTCCGAAGTCTCGGTCAGAACGCGGCAGGCGGCGCACGCCG
AGGTCGAAGCCTTCTCGCGG

Downstream 100 bases:

>100_bases
CAGATTAGCTGATCGTCGACGACCAGCTTCCGGAGGTTGCGAGCGCGATGTGAAGTGATGGCGAACCGGTCAGACCGGGA
GCTGGGACACCCCGCGTAGT

Product: transposase,IS1111A\IS1328\IS1533

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MGGSETDANDAEAICEAVTRPTMRFVAIKSEQQQAALALHRTRDLLVKQRTQLVNMIRGLLAEFGIEMARGLHHALDLAA
RVAQGAAPDVPELAARVITGLAGQIGDLQVRLTALEKELLTWHRTNELSQRLSTIPGVGLISATALAASVTDASRFRSGR
QFAASLGLTPLQNSSGGKERMGRISRMGDRYLRRLLVVGMTSLVRRARTRPDSVDPRIAAMLARKPARVVTVAAANRTAR
VAWSIMARGGVYRAPQGVTA

Sequences:

>Translated_260_residues
MGGSETDANDAEAICEAVTRPTMRFVAIKSEQQQAALALHRTRDLLVKQRTQLVNMIRGLLAEFGIEMARGLHHALDLAA
RVAQGAAPDVPELAARVITGLAGQIGDLQVRLTALEKELLTWHRTNELSQRLSTIPGVGLISATALAASVTDASRFRSGR
QFAASLGLTPLQNSSGGKERMGRISRMGDRYLRRLLVVGMTSLVRRARTRPDSVDPRIAAMLARKPARVVTVAAANRTAR
VAWSIMARGGVYRAPQGVTA
>Mature_259_residues
GGSETDANDAEAICEAVTRPTMRFVAIKSEQQQAALALHRTRDLLVKQRTQLVNMIRGLLAEFGIEMARGLHHALDLAAR
VAQGAAPDVPELAARVITGLAGQIGDLQVRLTALEKELLTWHRTNELSQRLSTIPGVGLISATALAASVTDASRFRSGRQ
FAASLGLTPLQNSSGGKERMGRISRMGDRYLRRLLVVGMTSLVRRARTRPDSVDPRIAAMLARKPARVVTVAAANRTARV
AWSIMARGGVYRAPQGVTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 28007; Mature: 27876

Theoretical pI: Translated: 11.97; Mature: 11.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGSETDANDAEAICEAVTRPTMRFVAIKSEQQQAALALHRTRDLLVKQRTQLVNMIRGL
CCCCCCCCCHHHHHHHHHHCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEFGIEMARGLHHALDLAARVAQGAAPDVPELAARVITGLAGQIGDLQVRLTALEKELL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TWHRTNELSQRLSTIPGVGLISATALAASVTDASRFRSGRQFAASLGLTPLQNSSGGKER
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
MGRISRMGDRYLRRLLVVGMTSLVRRARTRPDSVDPRIAAMLARKPARVVTVAAANRTAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHH
VAWSIMARGGVYRAPQGVTA
HHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
GGSETDANDAEAICEAVTRPTMRFVAIKSEQQQAALALHRTRDLLVKQRTQLVNMIRGL
CCCCCCCCHHHHHHHHHHCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEFGIEMARGLHHALDLAARVAQGAAPDVPELAARVITGLAGQIGDLQVRLTALEKELL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TWHRTNELSQRLSTIPGVGLISATALAASVTDASRFRSGRQFAASLGLTPLQNSSGGKER
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
MGRISRMGDRYLRRLLVVGMTSLVRRARTRPDSVDPRIAAMLARKPARVVTVAAANRTAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHH
VAWSIMARGGVYRAPQGVTA
HHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]