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The map label for this gene is dan [H]

Identifier: 197105603

GI number: 197105603

Start: 2410076

End: 2411812

Strand: Direct

Name: dan [H]

Synonym: PHZ_c2140

Alternate gene names: 197105603

Gene position: 2410076-2411812 (Clockwise)

Preceding gene: 197105600

Following gene: 197105606

Centisome position: 60.31

GC content: 71.39

Gene sequence:

>1737_bases
ATGGAGAAGGCCTTCGACCTCGTTCTGCGGGGCGGCTCGGTCATCGACGGTTCCGGCAAGCCGGCTTTCGTGGCCGACGT
CGGCGTCAAGGCGGGCCGTATCGCGGCGGTGGGCCGGATCGCAGCCGCCGGCGCCGAGGAGATCGACGCGCGCGGCCAGC
TGGTCACCCCGGGCTTCGTGGACGTCCACACCCACTACGACGGGCAGGCGACCTGGGGCGAGCAGATGCAGCCCTCCTCC
TGGCACGGCGTCACGACCGTGGTGATGGGCAACTGCGGGGTCGGATTCGCGCCCTGCCGTCCGAACGACCGCGAGCGGGT
GATGCGGCTGATGGAAGGGGTCGAGGACATCCCCTTCCCGGTCCTCGACGAGGGCCTGCCCTGGAACTGGGAGACCTATC
CCGACTACCTCGACAGCCTCGCGGGCCGCCGCTTCGACCTCGACATCGGGGGCCTGCTGCCGCACGCGCCGCTGCGGGTC
TACGTCATGGGCGAGCGGGGCGCGAACCGCGAGCCGGCCACCCCGGACGACATTGCGGCCATGGCGGCGATCGCCCGCCA
GGCCATCCGGGCGGGCGCCCTCGGCTTCTCCACCTCCAAGACGCTGAACCACCGCACCAAGGACGGGGAATCCACCCCGA
CCCTGGGGGCCGCTGAGGACGAGCTCACCGGGATCGCCATGGCTCTCGCGGCCGAAGGGCGCGGCGTGATCGAATACATC
GGCGACTATTTCGACCCGGCCGAGGAATTCGCCATGCTGCGGCGGCTCGTCGAGAGGTCGGGTCGTCCCCTGTCGTTCGG
CCTGGCCCAGATCAGCGACCGGCCGGGCGACTACAAGATACTGCTTCAGAAGCTCACCGAGGCGGCGAAGGCCGGGCTGC
CGATGGCGGCGCAGGCGGCCCCGCGAGCGATCGGCATCCTATTCGGGCTGGAGCTGACGCTGAATCCCTTCCTGCAGCAC
CCCTCCTACGCCGAGATCCGCGACCTTCCGCACGCCGAGCGGGTCGCGCGCCTTCGCGATCCCGATTTCCGCGCCCGACT
GCTGGCCGAGGGCGGCTCGGCGGAGCGGCTGCGGGTGATCGAGCTGCAGAAATGGGACCGGATGTTCCTGCTGGGCGACG
AGCCCGACTACGAACAGGCGCCCGACCAGACCGTCGCCGCCATCGCCGCCCGCCAGGGCCGAACGCCGGCCGAGGTGGCG
CTGGACCACATGCTGGACCGGAACGGCCGCGGCATCCTCTACCTGGCCTTCGCCAACTACGTCTCAGGCGACCTCAGCGC
CGTGCACGAGATGCTGAGCCACCCCGCCGTGGTGCCGGGTCTGTCCGACGGCGGCGCGCACGTCGGCACCATCTGCGACG
GCAGCTTCCCGACCACGACCCTGGTCCACTGGACGCGGGACCGCACCCGGGGACCGAAGCTTCCGCTCGAGGAGATGATC
CGCAAGCAGACCAGCTATGCGGCCGACCTCGTGGGCCTGGGGGATCGGGGCCGCATCGCCCCGGGCTATCGGGCGGACCT
GAACGTCATCGACTACGAGCGTCTCCGGCTGAAGAGCCCGCAGGTCGCCTACGACCTTCCGATGGGCGGGCGCCGGCTGA
TCCAGCGGGCGGAAGGCTACACCGCGACGATCGTGGCCGGCGAGGTCACCTATCGGGACGGCGAGCCGACCGGAGCCCTG
CCGGGACGGCTGCTTCGGGGGCCGCAGTCGGCGCCGGCGGCGCTCGCCGCGGAGTAG

Upstream 100 bases:

>100_bases
TTGGCGCGAGGCGTCATCCGTGAGCACCTAATTGCATACAATTGCATCGATCGCGCGCGCCGATCTGCGCCCGCGGTCCA
GGCGCTCAGGGAGGGCGACC

Downstream 100 bases:

>100_bases
GCGCGCGCTGCAGGAGCCTCGCCGCTAAGCGCGGGCGCTCCGCCAATAGTCGTTGGCCGCCGCGACGGTCTGGAAGTTCA
CCGCCACGACGTGGGCGATC

Product: N-acyl-D-aspartate/D-glutamate deacylase

Products: NA

Alternate protein names: N-acyl-D-amino-acid deacylase [H]

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MEKAFDLVLRGGSVIDGSGKPAFVADVGVKAGRIAAVGRIAAAGAEEIDARGQLVTPGFVDVHTHYDGQATWGEQMQPSS
WHGVTTVVMGNCGVGFAPCRPNDRERVMRLMEGVEDIPFPVLDEGLPWNWETYPDYLDSLAGRRFDLDIGGLLPHAPLRV
YVMGERGANREPATPDDIAAMAAIARQAIRAGALGFSTSKTLNHRTKDGESTPTLGAAEDELTGIAMALAAEGRGVIEYI
GDYFDPAEEFAMLRRLVERSGRPLSFGLAQISDRPGDYKILLQKLTEAAKAGLPMAAQAAPRAIGILFGLELTLNPFLQH
PSYAEIRDLPHAERVARLRDPDFRARLLAEGGSAERLRVIELQKWDRMFLLGDEPDYEQAPDQTVAAIAARQGRTPAEVA
LDHMLDRNGRGILYLAFANYVSGDLSAVHEMLSHPAVVPGLSDGGAHVGTICDGSFPTTTLVHWTRDRTRGPKLPLEEMI
RKQTSYAADLVGLGDRGRIAPGYRADLNVIDYERLRLKSPQVAYDLPMGGRRLIQRAEGYTATIVAGEVTYRDGEPTGAL
PGRLLRGPQSAPAALAAE

Sequences:

>Translated_578_residues
MEKAFDLVLRGGSVIDGSGKPAFVADVGVKAGRIAAVGRIAAAGAEEIDARGQLVTPGFVDVHTHYDGQATWGEQMQPSS
WHGVTTVVMGNCGVGFAPCRPNDRERVMRLMEGVEDIPFPVLDEGLPWNWETYPDYLDSLAGRRFDLDIGGLLPHAPLRV
YVMGERGANREPATPDDIAAMAAIARQAIRAGALGFSTSKTLNHRTKDGESTPTLGAAEDELTGIAMALAAEGRGVIEYI
GDYFDPAEEFAMLRRLVERSGRPLSFGLAQISDRPGDYKILLQKLTEAAKAGLPMAAQAAPRAIGILFGLELTLNPFLQH
PSYAEIRDLPHAERVARLRDPDFRARLLAEGGSAERLRVIELQKWDRMFLLGDEPDYEQAPDQTVAAIAARQGRTPAEVA
LDHMLDRNGRGILYLAFANYVSGDLSAVHEMLSHPAVVPGLSDGGAHVGTICDGSFPTTTLVHWTRDRTRGPKLPLEEMI
RKQTSYAADLVGLGDRGRIAPGYRADLNVIDYERLRLKSPQVAYDLPMGGRRLIQRAEGYTATIVAGEVTYRDGEPTGAL
PGRLLRGPQSAPAALAAE
>Mature_578_residues
MEKAFDLVLRGGSVIDGSGKPAFVADVGVKAGRIAAVGRIAAAGAEEIDARGQLVTPGFVDVHTHYDGQATWGEQMQPSS
WHGVTTVVMGNCGVGFAPCRPNDRERVMRLMEGVEDIPFPVLDEGLPWNWETYPDYLDSLAGRRFDLDIGGLLPHAPLRV
YVMGERGANREPATPDDIAAMAAIARQAIRAGALGFSTSKTLNHRTKDGESTPTLGAAEDELTGIAMALAAEGRGVIEYI
GDYFDPAEEFAMLRRLVERSGRPLSFGLAQISDRPGDYKILLQKLTEAAKAGLPMAAQAAPRAIGILFGLELTLNPFLQH
PSYAEIRDLPHAERVARLRDPDFRARLLAEGGSAERLRVIELQKWDRMFLLGDEPDYEQAPDQTVAAIAARQGRTPAEVA
LDHMLDRNGRGILYLAFANYVSGDLSAVHEMLSHPAVVPGLSDGGAHVGTICDGSFPTTTLVHWTRDRTRGPKLPLEEMI
RKQTSYAADLVGLGDRGRIAPGYRADLNVIDYERLRLKSPQVAYDLPMGGRRLIQRAEGYTATIVAGEVTYRDGEPTGAL
PGRLLRGPQSAPAALAAE

Specific function: Has a wide specificity; hydrolyzes N-acyl derivative of neutral D-amino acids [H]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR023100
- InterPro:   IPR012855
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3; PF07908 D-aminoacyl_C [H]

EC number: =3.5.1.81 [H]

Molecular weight: Translated: 62513; Mature: 62513

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKAFDLVLRGGSVIDGSGKPAFVADVGVKAGRIAAVGRIAAAGAEEIDARGQLVTPGFV
CCCHHEEEEECCEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHCCCCCEECCCEE
DVHTHYDGQATWGEQMQPSSWHGVTTVVMGNCGVGFAPCRPNDRERVMRLMEGVEDIPFP
EEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
VLDEGLPWNWETYPDYLDSLAGRRFDLDIGGLLPHAPLRVYVMGERGANREPATPDDIAA
HHCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
MAAIARQAIRAGALGFSTSKTLNHRTKDGESTPTLGAAEDELTGIAMALAAEGRGVIEYI
HHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH
GDYFDPAEEFAMLRRLVERSGRPLSFGLAQISDRPGDYKILLQKLTEAAKAGLPMAAQAA
HHHCCHHHHHHHHHHHHHHCCCCEEECHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHC
PRAIGILFGLELTLNPFLQHPSYAEIRDLPHAERVARLRDPDFRARLLAEGGSAERLRVI
CHHEEEEEEEHHHHHHHHCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCCCCEEEE
ELQKWDRMFLLGDEPDYEQAPDQTVAAIAARQGRTPAEVALDHMLDRNGRGILYLAFANY
EECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECHH
VSGDLSAVHEMLSHPAVVPGLSDGGAHVGTICDGSFPTTTLVHWTRDRTRGPKLPLEEMI
CCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHH
RKQTSYAADLVGLGDRGRIAPGYRADLNVIDYERLRLKSPQVAYDLPMGGRRLIQRAEGY
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEECHHHHHCCCCCEEEECCCCHHHHHHHHCCC
TATIVAGEVTYRDGEPTGALPGRLLRGPQSAPAALAAE
EEEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MEKAFDLVLRGGSVIDGSGKPAFVADVGVKAGRIAAVGRIAAAGAEEIDARGQLVTPGFV
CCCHHEEEEECCEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHCCCCCEECCCEE
DVHTHYDGQATWGEQMQPSSWHGVTTVVMGNCGVGFAPCRPNDRERVMRLMEGVEDIPFP
EEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
VLDEGLPWNWETYPDYLDSLAGRRFDLDIGGLLPHAPLRVYVMGERGANREPATPDDIAA
HHCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
MAAIARQAIRAGALGFSTSKTLNHRTKDGESTPTLGAAEDELTGIAMALAAEGRGVIEYI
HHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH
GDYFDPAEEFAMLRRLVERSGRPLSFGLAQISDRPGDYKILLQKLTEAAKAGLPMAAQAA
HHHCCHHHHHHHHHHHHHHCCCCEEECHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHC
PRAIGILFGLELTLNPFLQHPSYAEIRDLPHAERVARLRDPDFRARLLAEGGSAERLRVI
CHHEEEEEEEHHHHHHHHCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCCCCEEEE
ELQKWDRMFLLGDEPDYEQAPDQTVAAIAARQGRTPAEVALDHMLDRNGRGILYLAFANY
EECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECHH
VSGDLSAVHEMLSHPAVVPGLSDGGAHVGTICDGSFPTTTLVHWTRDRTRGPKLPLEEMI
CCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHH
RKQTSYAADLVGLGDRGRIAPGYRADLNVIDYERLRLKSPQVAYDLPMGGRRLIQRAEGY
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEECHHHHHCCCCCEEEECCCCHHHHHHHHCCC
TATIVAGEVTYRDGEPTGALPGRLLRGPQSAPAALAAE
EEEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8541651 [H]