| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105587
Identifier: 197105587
GI number: 197105587
Start: 2390949
End: 2392376
Strand: Direct
Name: 197105587
Synonym: PHZ_c2124
Alternate gene names: NA
Gene position: 2390949-2392376 (Clockwise)
Preceding gene: 197105586
Following gene: 197105588
Centisome position: 59.83
GC content: 70.52
Gene sequence:
>1428_bases GTGGCGGTGATCGGCGCGGGCATGGCCGGCATCCTGGCGGGCGCCAAGCTTCGCGAGCGCGGCGTCGACTGCGTGATCTT CGAGAAGGCGGACCGCGTCGGCGGGACCTGGCGCGAGAACACCTATCCGGGCCTGGCCTGCGACGTGCCGGCCCACTGGT ACACCTATTCCTTCGCCCGCAATCCGGAGTGGGACACGCTGCTGGCCGCGGGGCCGGACATCCAGGCCTATTTCGAGCGT GTGGCGCGCGACTACGGCGTGCTTCCGCTCGTCCGCTTCGGCGACGAGGTGGTGAGCCTCCGGTACGTCGACGGCGGCTG GGAGGTCGCCACCGCGTCGGGCCATCGCGACCGGTTCGACGTGGTGATCAGCGCCGCGGGAGTGCTGCACCATCCCAACA TCCCCAAGTTCGAGGGGGCGGAGTCCTTCAAGGGGGCCATGTTCCACTCCGCGCGCTGGGATCACAGCACGCCGCTGGAC GGGCGCCGCATCGGCGTGATCGGCACCGGTTCGACCGCCGCCCAGCTCACCGCCGCGCTCGTGCCGCGCGCCGAGCGTTT CGACCTCTTCCAGCGCACCGCCCAATGGGTGCTGCCGCGCCCGAACCTGGCCTACACCGACGAGGAGAAGGCAAGGTACC GGGCCGACCCCGCGGCCCTCGAGGCCCTCGTCCAGCAGTACCGCTCCAAGACGATCGACGGCTATGCGACCGCCGTCCTC GACTACGACTCCCCGCAGCTCGCCGAGATCGAGCGCCTGTGCCGGGAGAACCTGGAGACGGTGCGCGATCCCGACCTGCG CCGCCGGCTGACGCCGGACTACCGGGCCGCGTGCAAGCGGTTGGTGATCTCGAGCGAGTTCTACGGCGCGATCCAGCAGC CCAACGCCAACCTCGTCACCGCGCCCATCGCGCGGATCGAGCCGGAAGGCGTGCGGACGGCCGACGGGATCCTGCACGAA CTGGACGTCCTGGTGCTCGCCACCGGCTTCCACACGGACCGCTTCATCCGCCCGGCCAAGGTGATCGGCCGTGGCGGCGC CGACCTGGACGCGGTGTGGGGCGACCACCCGGTCGCCTACCTCTCGGTGACGGTGCCGGACTTCCCGAACTTCTTCATGC TGGGCGGGCCGAACAGCCCGGTGGGGAACTTCTCGCTCATCGAGACCTGCGAGTGGCAGCTCGGCTACATCCTGCAGCTG CTCGAGGGCATGCGCCGCGGCGACTACCGCGAGGCGAGCGCCACCCACGAGGCGATGGACCGCTTCGAGGACGAGCGCCG GCGGGCGGCCGAGCGGACCGTGTGGGTGACCGGCTGCAAGAGCTGGTACCTCGACCGGCACGGCGTGCCGGCGTCCTGGA CCTTCACCTACGCCCGCTTCGTGGAAGAGATGACCGCGCCGCGGATGGAGGACTTCGAGACACGATGA
Upstream 100 bases:
>100_bases GGCAACCGTCACGGAACAGTGCGGAGGGAGGGCGCCGGTGAGCCACGCCTTGGAGAATGCAGACGCCGCAGCCGCCGGTC AGGGCCTGCGCCCGATCCGC
Downstream 100 bases:
>100_bases GGCCGGCCGGTGCGGCCCGCCCTCGTGGCGGCGCTCCGGCGCGATGGACAACCAGGGAGGAGAGGATGGTCACTCGGGAG ATGATCGCCAGCGCTCTGCG
Product: flavin-containing monooxygenase FMO
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MAVIGAGMAGILAGAKLRERGVDCVIFEKADRVGGTWRENTYPGLACDVPAHWYTYSFARNPEWDTLLAAGPDIQAYFER VARDYGVLPLVRFGDEVVSLRYVDGGWEVATASGHRDRFDVVISAAGVLHHPNIPKFEGAESFKGAMFHSARWDHSTPLD GRRIGVIGTGSTAAQLTAALVPRAERFDLFQRTAQWVLPRPNLAYTDEEKARYRADPAALEALVQQYRSKTIDGYATAVL DYDSPQLAEIERLCRENLETVRDPDLRRRLTPDYRAACKRLVISSEFYGAIQQPNANLVTAPIARIEPEGVRTADGILHE LDVLVLATGFHTDRFIRPAKVIGRGGADLDAVWGDHPVAYLSVTVPDFPNFFMLGGPNSPVGNFSLIETCEWQLGYILQL LEGMRRGDYREASATHEAMDRFEDERRRAAERTVWVTGCKSWYLDRHGVPASWTFTYARFVEEMTAPRMEDFETR
Sequences:
>Translated_475_residues MAVIGAGMAGILAGAKLRERGVDCVIFEKADRVGGTWRENTYPGLACDVPAHWYTYSFARNPEWDTLLAAGPDIQAYFER VARDYGVLPLVRFGDEVVSLRYVDGGWEVATASGHRDRFDVVISAAGVLHHPNIPKFEGAESFKGAMFHSARWDHSTPLD GRRIGVIGTGSTAAQLTAALVPRAERFDLFQRTAQWVLPRPNLAYTDEEKARYRADPAALEALVQQYRSKTIDGYATAVL DYDSPQLAEIERLCRENLETVRDPDLRRRLTPDYRAACKRLVISSEFYGAIQQPNANLVTAPIARIEPEGVRTADGILHE LDVLVLATGFHTDRFIRPAKVIGRGGADLDAVWGDHPVAYLSVTVPDFPNFFMLGGPNSPVGNFSLIETCEWQLGYILQL LEGMRRGDYREASATHEAMDRFEDERRRAAERTVWVTGCKSWYLDRHGVPASWTFTYARFVEEMTAPRMEDFETR >Mature_474_residues AVIGAGMAGILAGAKLRERGVDCVIFEKADRVGGTWRENTYPGLACDVPAHWYTYSFARNPEWDTLLAAGPDIQAYFERV ARDYGVLPLVRFGDEVVSLRYVDGGWEVATASGHRDRFDVVISAAGVLHHPNIPKFEGAESFKGAMFHSARWDHSTPLDG RRIGVIGTGSTAAQLTAALVPRAERFDLFQRTAQWVLPRPNLAYTDEEKARYRADPAALEALVQQYRSKTIDGYATAVLD YDSPQLAEIERLCRENLETVRDPDLRRRLTPDYRAACKRLVISSEFYGAIQQPNANLVTAPIARIEPEGVRTADGILHEL DVLVLATGFHTDRFIRPAKVIGRGGADLDAVWGDHPVAYLSVTVPDFPNFFMLGGPNSPVGNFSLIETCEWQLGYILQLL EGMRRGDYREASATHEAMDRFEDERRRAAERTVWVTGCKSWYLDRHGVPASWTFTYARFVEEMTAPRMEDFETR
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Homo sapiens, GI4503757, Length=221, Percent_Identity=29.4117647058824, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI4503755, Length=219, Percent_Identity=26.4840182648402, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI50541965, Length=219, Percent_Identity=26.4840182648402, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI50541961, Length=219, Percent_Identity=26.4840182648402, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI221316674, Length=221, Percent_Identity=28.5067873303167, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI221316678, Length=221, Percent_Identity=28.5067873303167, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI4503759, Length=222, Percent_Identity=27.027027027027, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI221316672, Length=221, Percent_Identity=28.5067873303167, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI25145785, Length=213, Percent_Identity=23.4741784037559, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI19922866, Length=320, Percent_Identity=22.8125, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020946 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 53239; Mature: 53107
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIGAGMAGILAGAKLRERGVDCVIFEKADRVGGTWRENTYPGLACDVPAHWYTYSFAR CCEECCCHHHHHHCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCEEEEECC NPEWDTLLAAGPDIQAYFERVARDYGVLPLVRFGDEVVSLRYVDGGWEVATASGHRDRFD CCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHCCCEEEEEEEECCCEEEEECCCCCCCEE VVISAAGVLHHPNIPKFEGAESFKGAMFHSARWDHSTPLDGRRIGVIGTGSTAAQLTAAL EEEEECCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHH VPRAERFDLFQRTAQWVLPRPNLAYTDEEKARYRADPAALEALVQQYRSKTIDGYATAVL CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEE DYDSPQLAEIERLCRENLETVRDPDLRRRLTPDYRAACKRLVISSEFYGAIQQPNANLVT ECCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE APIARIEPEGVRTADGILHELDVLVLATGFHTDRFIRPAKVIGRGGADLDAVWGDHPVAY CCHHHCCCCCCCHHHHHHHHHCEEEEEECCCCCHHCCHHHHHCCCCCCCCHHCCCCCEEE LSVTVPDFPNFFMLGGPNSPVGNFSLIETCEWQLGYILQLLEGMRRGDYREASATHEAMD EEEECCCCCCEEEECCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RFEDERRRAAERTVWVTGCKSWYLDRHGVPASWTFTYARFVEEMTAPRMEDFETR HHHHHHHHHHHCEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure AVIGAGMAGILAGAKLRERGVDCVIFEKADRVGGTWRENTYPGLACDVPAHWYTYSFAR CEECCCHHHHHHCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCEEEEECC NPEWDTLLAAGPDIQAYFERVARDYGVLPLVRFGDEVVSLRYVDGGWEVATASGHRDRFD CCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHCCCEEEEEEEECCCEEEEECCCCCCCEE VVISAAGVLHHPNIPKFEGAESFKGAMFHSARWDHSTPLDGRRIGVIGTGSTAAQLTAAL EEEEECCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHH VPRAERFDLFQRTAQWVLPRPNLAYTDEEKARYRADPAALEALVQQYRSKTIDGYATAVL CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEE DYDSPQLAEIERLCRENLETVRDPDLRRRLTPDYRAACKRLVISSEFYGAIQQPNANLVT ECCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE APIARIEPEGVRTADGILHELDVLVLATGFHTDRFIRPAKVIGRGGADLDAVWGDHPVAY CCHHHCCCCCCCHHHHHHHHHCEEEEEECCCCCHHCCHHHHHCCCCCCCCHHCCCCCEEE LSVTVPDFPNFFMLGGPNSPVGNFSLIETCEWQLGYILQLLEGMRRGDYREASATHEAMD EEEECCCCCCEEEECCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RFEDERRRAAERTVWVTGCKSWYLDRHGVPASWTFTYARFVEEMTAPRMEDFETR HHHHHHHHHHHCEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]