| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is cpg2 [H]
Identifier: 197105529
GI number: 197105529
Start: 2308487
End: 2309806
Strand: Reverse
Name: cpg2 [H]
Synonym: PHZ_c2066
Alternate gene names: 197105529
Gene position: 2309806-2308487 (Counterclockwise)
Preceding gene: 197105530
Following gene: 197105527
Centisome position: 57.8
GC content: 73.41
Gene sequence:
>1320_bases ATGAAGACCGCCTGCGCCGCCCTCCTGGGGGCGTTCGCCCTCGCGTCCGCCGCGCCGGCGCAGGCCGCGCCGCCCACGCC GGCCGAGCGCGCGATGATCGCCGCCGTCGAGGCCGAGCGCGAGCGCAGCGTGAAGCTGCTGGAAGACCTGGTGAAGGTGA ACTCCGGCACCATGAACCTGCCCGGCGTCGAGCAGGTTGGGCGGATGATGCGCGCCGAGCTGGAGCCGCTGGGCTTCGAC GTGCGCTGGGTCCCCATGAAGGCGACCGACCGGGCCGGCCACATCGTGGCCGTCCACAAGGGGAACGGGCGCGGCAAGCG GCTGCTGCTGATCGGCCACCTCGACACCGTCTTCGAACCCGACAGCCCGTTCCAGGCCTGGACCCGCCGCGGCGACGTGG CCGAGGGGCCGGGGGTGGGCGACGACAAGGGCGGCATGGTCGTGATGATCGCGGCGCTGCGGGCGATGCAGGCGGCCGGG ACGCTGAAGGACGCCGACATCACCGTCGTGCTGACGGGCGACGAGGAGAAGCCGGGCGCGCCGCTGTCGATCGGCCGGGC CGACCTGATCGCCGCCGGCCGCGCCAGCGACGTGGCGCTGGACTTCGAGGGCCTCTCGCGCGAGGGCGGCCGGGACATCG GGGCGATCGCCCGCCGCTCGGCGACGTCCTGGACGCTGCGGGCCACGGCGCGCTCGGGCCACTCTTCGGGGGTCTGCATG GAGGGGCCCGGCTGCGGCGCGGTCTACGAGCTGACCCGGATCCTCGATGCGTTCCGGCGCGAACTGGCCGAGCCGAACCT GACCTACAACGTGGGCATCCTCGTCGGCGGCGCGAACGCCTCGGTCAACGAAGGCCGGACCGGCGGCCAGGCCAGCGGCA AGTCCAACATCATCGCGGCCGAGGCGGTCGCCGTGGGCGACATCCGCACGCTGTCCAACGAGCAGGAGGCCCGGGTGCGG GCGAAGATGCAGGCGATCGTGGCCCGCCACCTGCCGAAGACCGAGGCCGTCCTGACCTTCGAGGAGACCGGCTATCCGCC GATGGCCCCGACCGAGGGGAACAAGGCCCTGCTGGCCAGGCTGAATGAGGTGAACCGCACCCTCGGCCTTGCCGAGATGC CGCAGGGCGACCCCGCCAGACGCGGGGCGGGGGACATCGCCTTCGTCTCGTTCATCGACGGGCTGGTCGGCCTGGGTCCG GCCGGCGAGAACAGCCACGCCCCGGGCGAGACGATCGACCTCACGAGCCTCGAGGTCCAGGCCAAGCGGGCCGCGCTGCT GATGACCCGCCTGTCGCGCGAACCGCGCGGCAGCCGCTAG
Upstream 100 bases:
>100_bases AGGCCTACGCCGACCTGCCGCGCGGCGCCTCGCGCTCGGCCCTTGTCGAATTCGTCCGCAGCCTGCGTAGTCAGCCGGGC TGAAACCCGGAGCCATTCCC
Downstream 100 bases:
>100_bases GCCCCTCGGCTAGGCCCCTCGGCTAGGCCCCTCGGCTAGGCCGGCGTCCCCAGCTCGGCCAGGGCGCGCTCCTTCACGGC CTTGTAGTCCACCTTGCCGT
Product: peptidase, M20/M25/M40 family
Products: NA
Alternate protein names: CPDG2; Folate hydrolase G2; Glutamate carboxypeptidase; Pteroylmonoglutamic acid hydrolase G2; Glucarpidase [H]
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MKTACAALLGAFALASAAPAQAAPPTPAERAMIAAVEAERERSVKLLEDLVKVNSGTMNLPGVEQVGRMMRAELEPLGFD VRWVPMKATDRAGHIVAVHKGNGRGKRLLLIGHLDTVFEPDSPFQAWTRRGDVAEGPGVGDDKGGMVVMIAALRAMQAAG TLKDADITVVLTGDEEKPGAPLSIGRADLIAAGRASDVALDFEGLSREGGRDIGAIARRSATSWTLRATARSGHSSGVCM EGPGCGAVYELTRILDAFRRELAEPNLTYNVGILVGGANASVNEGRTGGQASGKSNIIAAEAVAVGDIRTLSNEQEARVR AKMQAIVARHLPKTEAVLTFEETGYPPMAPTEGNKALLARLNEVNRTLGLAEMPQGDPARRGAGDIAFVSFIDGLVGLGP AGENSHAPGETIDLTSLEVQAKRAALLMTRLSREPRGSR
Sequences:
>Translated_439_residues MKTACAALLGAFALASAAPAQAAPPTPAERAMIAAVEAERERSVKLLEDLVKVNSGTMNLPGVEQVGRMMRAELEPLGFD VRWVPMKATDRAGHIVAVHKGNGRGKRLLLIGHLDTVFEPDSPFQAWTRRGDVAEGPGVGDDKGGMVVMIAALRAMQAAG TLKDADITVVLTGDEEKPGAPLSIGRADLIAAGRASDVALDFEGLSREGGRDIGAIARRSATSWTLRATARSGHSSGVCM EGPGCGAVYELTRILDAFRRELAEPNLTYNVGILVGGANASVNEGRTGGQASGKSNIIAAEAVAVGDIRTLSNEQEARVR AKMQAIVARHLPKTEAVLTFEETGYPPMAPTEGNKALLARLNEVNRTLGLAEMPQGDPARRGAGDIAFVSFIDGLVGLGP AGENSHAPGETIDLTSLEVQAKRAALLMTRLSREPRGSR >Mature_439_residues MKTACAALLGAFALASAAPAQAAPPTPAERAMIAAVEAERERSVKLLEDLVKVNSGTMNLPGVEQVGRMMRAELEPLGFD VRWVPMKATDRAGHIVAVHKGNGRGKRLLLIGHLDTVFEPDSPFQAWTRRGDVAEGPGVGDDKGGMVVMIAALRAMQAAG TLKDADITVVLTGDEEKPGAPLSIGRADLIAAGRASDVALDFEGLSREGGRDIGAIARRSATSWTLRATARSGHSSGVCM EGPGCGAVYELTRILDAFRRELAEPNLTYNVGILVGGANASVNEGRTGGQASGKSNIIAAEAVAVGDIRTLSNEQEARVR AKMQAIVARHLPKTEAVLTFEETGYPPMAPTEGNKALLARLNEVNRTLGLAEMPQGDPARRGAGDIAFVSFIDGLVGLGP AGENSHAPGETIDLTSLEVQAKRAALLMTRLSREPRGSR
Specific function: Catalyzes the hydrolysis of reduced and non-reduced folates to pteroates and L-glutamate. This enzyme has a broad specificity [H]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001261 - InterPro: IPR017150 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.4.17.11 [H]
Molecular weight: Translated: 46000; Mature: 46000
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTACAALLGAFALASAAPAQAAPPTPAERAMIAAVEAERERSVKLLEDLVKVNSGTMNL CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCC PGVEQVGRMMRAELEPLGFDVRWVPMKATDRAGHIVAVHKGNGRGKRLLLIGHLDTVFEP CCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEECCHHHCCC DSPFQAWTRRGDVAEGPGVGDDKGGMVVMIAALRAMQAAGTLKDADITVVLTGDEEKPGA CCCHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC PLSIGRADLIAAGRASDVALDFEGLSREGGRDIGAIARRSATSWTLRATARSGHSSGVCM CCCCCCHHEEECCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCEEE EGPGCGAVYELTRILDAFRRELAEPNLTYNVGILVGGANASVNEGRTGGQASGKSNIIAA CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEE EAVAVGDIRTLSNEQEARVRAKMQAIVARHLPKTEAVLTFEETGYPPMAPTEGNKALLAR HEEEECCHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHH LNEVNRTLGLAEMPQGDPARRGAGDIAFVSFIDGLVGLGPAGENSHAPGETIDLTSLEVQ HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHH AKRAALLMTRLSREPRGSR HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKTACAALLGAFALASAAPAQAAPPTPAERAMIAAVEAERERSVKLLEDLVKVNSGTMNL CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCC PGVEQVGRMMRAELEPLGFDVRWVPMKATDRAGHIVAVHKGNGRGKRLLLIGHLDTVFEP CCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEECCHHHCCC DSPFQAWTRRGDVAEGPGVGDDKGGMVVMIAALRAMQAAGTLKDADITVVLTGDEEKPGA CCCHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC PLSIGRADLIAAGRASDVALDFEGLSREGGRDIGAIARRSATSWTLRATARSGHSSGVCM CCCCCCHHEEECCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCEEE EGPGCGAVYELTRILDAFRRELAEPNLTYNVGILVGGANASVNEGRTGGQASGKSNIIAA CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEE EAVAVGDIRTLSNEQEARVRAKMQAIVARHLPKTEAVLTFEETGYPPMAPTEGNKALLAR HEEEECCHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHH LNEVNRTLGLAEMPQGDPARRGAGDIAFVSFIDGLVGLGPAGENSHAPGETIDLTSLEVQ HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHH AKRAALLMTRLSREPRGSR HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6396165; 3838935; 9083113 [H]