Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197105522

Identifier: 197105522

GI number: 197105522

Start: 2300669

End: 2301829

Strand: Direct

Name: 197105522

Synonym: PHZ_c2059

Alternate gene names: NA

Gene position: 2300669-2301829 (Clockwise)

Preceding gene: 197105521

Following gene: 197105523

Centisome position: 57.57

GC content: 71.4

Gene sequence:

>1161_bases
ATGGCGTTCTGGCCCATGGTCGGGGCCACGGCGGTGACGCTGGTCGCCCTGCTGCTGGAACGGATCCTGCGCCTGCTGGA
CCTGCTGTCGGAAAGCAGCGAGCGGTTCACCTTCGTCGCCCAGCTGGCCGTCAACCTCGTGCCGCACTACGTGGGCCTGA
CCCTGCCCGCGGCGTTCTTCATCGCCCTGATCATCGTCGTGAACCGGATGAATCAGGCCTCTGAGATCGACGCCCTGCTG
GCGGCCGGCGTCTCGCTGACGCGGCTGGCGGCGCCCTATCTGGTGCTGGCGGGGGTTCTCAGCTTCCTGACGCTGATCGT
GTTCGGCGCGCTGCAGCCCTACAGCCGCTACGCCTACCGCGCGGTGCTGCACGCGGCCCAGAACGCCGGCTGGAGCGGCC
AGGTGCCCGAGGGGACGATCATCGCCCCCAACGACGACCTGATCATGACCACCGACCAGGCCGACGCCGCGGGCCAGCGG
CTGACCCGGGTGTTCATCCGCCGCCTGACGCCCGAGGGACGCGAAGAGGTCACCACGGCGGGCGTCGCCGAGCTTCGCCG
GACCGCCGACGGTAAGAACGTCACCCTCATGCTGAAGGACGGCCAGCAGCTGCGCTTCAACCGGCGCGGCGAGCCCGAGC
TGCTCTCGTTCGAGGACTTCACCATGCAGCTGCCGCTGAGCGGGCCCGCCCGGCTGCTGCGCGCCCGCGGCGGCGACGAG
CGCGAGCTCAACCTCTTCGAGCTGGCCAAGAAGGCGAACGATCCCCAGTCGGTGATCCCGCGCGAGACCCTGCTGGCCGA
GCTCTACGGGCGCCTGGCGCGGGCGCTGGCCCTGCCGCTGCTGCCGCTGCTGGCCGTGCCGCTGGGCCTGTCGGCCAAGC
GCAGCGGCCGCGCGCCGGGGGTGATCGTGGGCGGGATCTTGCTGCTCGCCTTCCACCACCTCATCCAGCTGGGCCAGAGC
TTCGCCGAGACGGGCCGCGCGCCGGCCGAGGCGGGCGTCGGGATCCCCTTCGTCGCCTTCGCGGCGATCTGCTTCACCGT
CTTCCTCACCAGCCGCAAGCGGCCGGGCGAGACCCCCGTCGGACGGGTGATGGAGCACCTGGCGAACGTCATCGTGCGCG
TGCGCAAGCGGGTGAAGCTGCGCCGGAAGGCCCTGCCGTGA

Upstream 100 bases:

>100_bases
AGGCCGCGGCCCTGGCCGCCGACTTCGCCGCGCGCTGGCAGGCCTGAAGCGCCCGCGACCCGGGGGGAATGTGAGCCTCA
TCGACCGTTACCTTCTCCGG

Downstream 100 bases:

>100_bases
GCCTCGGCCTCTACCTCTTCAGGCTCGCCTTCGGCCGCATCCTGGCGGCGCTGGCGGTGCTGGTCGGCATCCTGCAGATC
CTCGACCTGCTGGACGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Permease; Permease YjgP/YjgQ; Transporter YjgP/YjgQ; Permease YjgP

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MAFWPMVGATAVTLVALLLERILRLLDLLSESSERFTFVAQLAVNLVPHYVGLTLPAAFFIALIIVVNRMNQASEIDALL
AAGVSLTRLAAPYLVLAGVLSFLTLIVFGALQPYSRYAYRAVLHAAQNAGWSGQVPEGTIIAPNDDLIMTTDQADAAGQR
LTRVFIRRLTPEGREEVTTAGVAELRRTADGKNVTLMLKDGQQLRFNRRGEPELLSFEDFTMQLPLSGPARLLRARGGDE
RELNLFELAKKANDPQSVIPRETLLAELYGRLARALALPLLPLLAVPLGLSAKRSGRAPGVIVGGILLLAFHHLIQLGQS
FAETGRAPAEAGVGIPFVAFAAICFTVFLTSRKRPGETPVGRVMEHLANVIVRVRKRVKLRRKALP

Sequences:

>Translated_386_residues
MAFWPMVGATAVTLVALLLERILRLLDLLSESSERFTFVAQLAVNLVPHYVGLTLPAAFFIALIIVVNRMNQASEIDALL
AAGVSLTRLAAPYLVLAGVLSFLTLIVFGALQPYSRYAYRAVLHAAQNAGWSGQVPEGTIIAPNDDLIMTTDQADAAGQR
LTRVFIRRLTPEGREEVTTAGVAELRRTADGKNVTLMLKDGQQLRFNRRGEPELLSFEDFTMQLPLSGPARLLRARGGDE
RELNLFELAKKANDPQSVIPRETLLAELYGRLARALALPLLPLLAVPLGLSAKRSGRAPGVIVGGILLLAFHHLIQLGQS
FAETGRAPAEAGVGIPFVAFAAICFTVFLTSRKRPGETPVGRVMEHLANVIVRVRKRVKLRRKALP
>Mature_385_residues
AFWPMVGATAVTLVALLLERILRLLDLLSESSERFTFVAQLAVNLVPHYVGLTLPAAFFIALIIVVNRMNQASEIDALLA
AGVSLTRLAAPYLVLAGVLSFLTLIVFGALQPYSRYAYRAVLHAAQNAGWSGQVPEGTIIAPNDDLIMTTDQADAAGQRL
TRVFIRRLTPEGREEVTTAGVAELRRTADGKNVTLMLKDGQQLRFNRRGEPELLSFEDFTMQLPLSGPARLLRARGGDER
ELNLFELAKKANDPQSVIPRETLLAELYGRLARALALPLLPLLAVPLGLSAKRSGRAPGVIVGGILLLAFHHLIQLGQSF
AETGRAPAEAGVGIPFVAFAAICFTVFLTSRKRPGETPVGRVMEHLANVIVRVRKRVKLRRKALP

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42017; Mature: 41886

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFWPMVGATAVTLVALLLERILRLLDLLSESSERFTFVAQLAVNLVPHYVGLTLPAAFF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALIIVVNRMNQASEIDALLAAGVSLTRLAAPYLVLAGVLSFLTLIVFGALQPYSRYAYR
HHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AVLHAAQNAGWSGQVPEGTIIAPNDDLIMTTDQADAAGQRLTRVFIRRLTPEGREEVTTA
HHHHHHHCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
GVAELRRTADGKNVTLMLKDGQQLRFNRRGEPELLSFEDFTMQLPLSGPARLLRARGGDE
HHHHHHHHCCCCCEEEEEECCCHHCCCCCCCCCEEEECCCEEECCCCCHHHHHHHCCCCC
RELNLFELAKKANDPQSVIPRETLLAELYGRLARALALPLLPLLAVPLGLSAKRSGRAPG
CCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
VIVGGILLLAFHHLIQLGQSFAETGRAPAEAGVGIPFVAFAAICFTVFLTSRKRPGETPV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH
GRVMEHLANVIVRVRKRVKLRRKALP
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFWPMVGATAVTLVALLLERILRLLDLLSESSERFTFVAQLAVNLVPHYVGLTLPAAFF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALIIVVNRMNQASEIDALLAAGVSLTRLAAPYLVLAGVLSFLTLIVFGALQPYSRYAYR
HHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AVLHAAQNAGWSGQVPEGTIIAPNDDLIMTTDQADAAGQRLTRVFIRRLTPEGREEVTTA
HHHHHHHCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
GVAELRRTADGKNVTLMLKDGQQLRFNRRGEPELLSFEDFTMQLPLSGPARLLRARGGDE
HHHHHHHHCCCCCEEEEEECCCHHCCCCCCCCCEEEECCCEEECCCCCHHHHHHHCCCCC
RELNLFELAKKANDPQSVIPRETLLAELYGRLARALALPLLPLLAVPLGLSAKRSGRAPG
CCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
VIVGGILLLAFHHLIQLGQSFAETGRAPAEAGVGIPFVAFAAICFTVFLTSRKRPGETPV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH
GRVMEHLANVIVRVRKRVKLRRKALP
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA