| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105473
Identifier: 197105473
GI number: 197105473
Start: 2248559
End: 2249677
Strand: Reverse
Name: 197105473
Synonym: PHZ_c2010
Alternate gene names: NA
Gene position: 2249677-2248559 (Counterclockwise)
Preceding gene: 197105474
Following gene: 197105472
Centisome position: 56.29
GC content: 71.94
Gene sequence:
>1119_bases GTGACCGGTCGGCCCTCCTGGTTCCAGCGCTTCCTGCTGCCTGGCCTCGCCTTCAAGGCGGTGGTGATCGGCGGCGGGTA TGCGACGGGCCGCGAGCTCGCCGAGTTCTTCCTGCCCAGCGGGCCCCAGGGCGGCCTGATGGCTATCACCCTGGCCACGG CGATCTGGAGCGTGGTCTGCGCGGCGACCTTCCTGTTCGCCCAGGCGACCGGCAGCGAGGACTACCGGACCTTCTTCCGC AACCTGCTGGGTCCGTTCTGGCCGGCCTTCGAGGCGGCCTACGTCTTCTTCGCCGTCCTCATCCTGGCGGTCATCGGCGC CGCCGCCGGCGCCATCGGCGAGGCGGTGTTCGGCTGGCCGGCCATCGTCGGGGCGCTGGCGCTCACCGGCGCGATCGCCG GCGTCGTCACCTTCGGGACCTCGGCCGTCGAGCGGCTGTTCAAGTACGCCTCGATGTTCCTCTACGGCGTCTACGGGCTT TTCATGCTGCTGGCCCTGGGCGCGTTCGGCGACCGCATCGCCGAGGCCTTCGCCCGACCCACGCCCGTGGACGGATGGAT CGCCGGCGGCGTCACCTACGCCAGCTACAACATGGTGGCCGCGGTGATGATCCTGCCGGTGCTGCGCCACCTGACCAGCC GGCGCGACGCGGTGGCGGCGGGCCTGCTGGCCGGGCCGCTGGCCATGCTGCCGGCCGCCCTGTTCTTCGTCTGCATGGCC GCCTACCACCCGCAGATCGCCGGCGAGGCCCTGCCGTCGGATTTCCTGCTTCGGCGGATGGAGCTTCCGGTCTTCCACCT GGTGTTCCAGGGCATGATCTTCATCGCCCTGCTGGAGACGGGCGTCGGGGCCGTCCACGCCGTCAACGAGCGGATCGCCC ACGTCTGGAGCCGCGCCCGCGCCGGCGCGGCGTTCCCGCACGCTGCGCGGCTGGCGCTCGCCGCCGCGCTGCTGGTGGGG TCCATCTTCATCGCCGACCGCTTTGGCCTCGTGGCCCTGATCGCCAAGGGCTACCGCCTGCTCGCCTGGATGTTCCTGGC CGTCTACGTCCTGCCGCTGATGACCTGGGGCGTCTGGCGCCTCGCCACCGGCCGGACCGGGCGCGCCGTCGCCGCCTGA
Upstream 100 bases:
>100_bases ACGAGGTGATGGCGCGGGCCTCCCGCGCCCTGGGCCTGCCGGTCGCGGACCCGATGCGCGGCGGGCCGGCGTTCGAGCGG CTGGTGGAGGCCTGTCTGGC
Downstream 100 bases:
>100_bases TGGGAAAGGTCCCCCGATGCGCCGCCTGATCGCCGCCCTGGTCCTCTTCGCGCCGACTTTGGCGTGCGCGGCCCCGCCGC CCGGCTTCGACCGGCGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MTGRPSWFQRFLLPGLAFKAVVIGGGYATGRELAEFFLPSGPQGGLMAITLATAIWSVVCAATFLFAQATGSEDYRTFFR NLLGPFWPAFEAAYVFFAVLILAVIGAAAGAIGEAVFGWPAIVGALALTGAIAGVVTFGTSAVERLFKYASMFLYGVYGL FMLLALGAFGDRIAEAFARPTPVDGWIAGGVTYASYNMVAAVMILPVLRHLTSRRDAVAAGLLAGPLAMLPAALFFVCMA AYHPQIAGEALPSDFLLRRMELPVFHLVFQGMIFIALLETGVGAVHAVNERIAHVWSRARAGAAFPHAARLALAAALLVG SIFIADRFGLVALIAKGYRLLAWMFLAVYVLPLMTWGVWRLATGRTGRAVAA
Sequences:
>Translated_372_residues MTGRPSWFQRFLLPGLAFKAVVIGGGYATGRELAEFFLPSGPQGGLMAITLATAIWSVVCAATFLFAQATGSEDYRTFFR NLLGPFWPAFEAAYVFFAVLILAVIGAAAGAIGEAVFGWPAIVGALALTGAIAGVVTFGTSAVERLFKYASMFLYGVYGL FMLLALGAFGDRIAEAFARPTPVDGWIAGGVTYASYNMVAAVMILPVLRHLTSRRDAVAAGLLAGPLAMLPAALFFVCMA AYHPQIAGEALPSDFLLRRMELPVFHLVFQGMIFIALLETGVGAVHAVNERIAHVWSRARAGAAFPHAARLALAAALLVG SIFIADRFGLVALIAKGYRLLAWMFLAVYVLPLMTWGVWRLATGRTGRAVAA >Mature_371_residues TGRPSWFQRFLLPGLAFKAVVIGGGYATGRELAEFFLPSGPQGGLMAITLATAIWSVVCAATFLFAQATGSEDYRTFFRN LLGPFWPAFEAAYVFFAVLILAVIGAAAGAIGEAVFGWPAIVGALALTGAIAGVVTFGTSAVERLFKYASMFLYGVYGLF MLLALGAFGDRIAEAFARPTPVDGWIAGGVTYASYNMVAAVMILPVLRHLTSRRDAVAAGLLAGPLAMLPAALFFVCMAA YHPQIAGEALPSDFLLRRMELPVFHLVFQGMIFIALLETGVGAVHAVNERIAHVWSRARAGAAFPHAARLALAAALLVGS IFIADRFGLVALIAKGYRLLAWMFLAVYVLPLMTWGVWRLATGRTGRAVAA
Specific function: Unknown
COG id: COG3949
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39549; Mature: 39418
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRPSWFQRFLLPGLAFKAVVIGGGYATGRELAEFFLPSGPQGGLMAITLATAIWSVVC CCCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH AATFLFAQATGSEDYRTFFRNLLGPFWPAFEAAYVFFAVLILAVIGAAAGAIGEAVFGWP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIVGALALTGAIAGVVTFGTSAVERLFKYASMFLYGVYGLFMLLALGAFGDRIAEAFARP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TPVDGWIAGGVTYASYNMVAAVMILPVLRHLTSRRDAVAAGLLAGPLAMLPAALFFVCMA CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYHPQIAGEALPSDFLLRRMELPVFHLVFQGMIFIALLETGVGAVHAVNERIAHVWSRAR HHCCHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AGAAFPHAARLALAAALLVGSIFIADRFGLVALIAKGYRLLAWMFLAVYVLPLMTWGVWR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATGRTGRAVAA HCCCCCCCCCCC >Mature Secondary Structure TGRPSWFQRFLLPGLAFKAVVIGGGYATGRELAEFFLPSGPQGGLMAITLATAIWSVVC CCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH AATFLFAQATGSEDYRTFFRNLLGPFWPAFEAAYVFFAVLILAVIGAAAGAIGEAVFGWP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIVGALALTGAIAGVVTFGTSAVERLFKYASMFLYGVYGLFMLLALGAFGDRIAEAFARP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TPVDGWIAGGVTYASYNMVAAVMILPVLRHLTSRRDAVAAGLLAGPLAMLPAALFFVCMA CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYHPQIAGEALPSDFLLRRMELPVFHLVFQGMIFIALLETGVGAVHAVNERIAHVWSRAR HHCCHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AGAAFPHAARLALAAALLVGSIFIADRFGLVALIAKGYRLLAWMFLAVYVLPLMTWGVWR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATGRTGRAVAA HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA