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The map label for this gene is yfmJ [H]

Identifier: 197105446

GI number: 197105446

Start: 2215169

End: 2216170

Strand: Direct

Name: yfmJ [H]

Synonym: PHZ_c1983

Alternate gene names: 197105446

Gene position: 2215169-2216170 (Clockwise)

Preceding gene: 197105442

Following gene: 197105447

Centisome position: 55.43

GC content: 69.26

Gene sequence:

>1002_bases
ATGACCGCCGCGCGCGAGATCCGCCTGAAGAGCCGCCCCTCGGGCGTGCCGACCCACGACAACTTCGAGCTGGCGACCGT
CGAGCTGCCCGATCCCGGCCCGGGCGAAGTCCAGGTCAAGAACCTCTGGATGACGGTCGATCCTTACATGCGCGGGCGCA
TGAACGACGTGAAGAGCTACGTCCCGCCGTTCCAGCTGGGCGAGGCGCTGCAGGGCGGCGCGATCGGCGAGGTCGCCGTC
TCGAACGACCCGTCCCTGAAGCCGGGCGACCTCGTGCTGTCGATGCTCGGCTGGCGCGAACGGTTCAACGCCCCGGCTGG
CGCGCTGCAGAAGATCGACCCGCAGGGCCTGCCACCCCAGGCGTTCCTGGGCGTGGCCGGCATGCCGGGCCTGACCGCCT
ACGCCGGGCTTCTGCGCGTGGCCGGTCTGAAGGACGGCGACGTGGTGTTCGTCTCGGGCGCGGCGGGCGCCGTCGGCTCG
CTGGTCTGCCAGATCGCCAAGGCCAAGGGCCACACCGTGATCGGCTCGGCGGGGGGACCTGAGAAGGTCGCCTTCCTGAA
GGAGATCGGGGTCGACCACGCCATCGACTACAAGGCCGAGAAGGACCTCACGGCCGCCCTGGCCCGGGCCGCCCCGAACG
GCATCGACGTCTATTTCGACAACGTCGGCGGCGACCACCTCGAGGCGGCCCTCAACGCCGCCCGCCCCTTCGCCCGCTTC
GCCGAGTGCGGGATGATCTCGATGTACAACTCGACCGAGCCGCCGGCCGGGCCGCGGAACATCATCCAGGTCGTCGGCAA
GCAGATCCGCATCCAGGGCTTCATCGTCTCCAGCCACGCCGACATGCAGGCCGACTTCCAGCGGGACCTGGCCGGCTGGG
TGCGCGAGGGCAAGGTGAAGTGGAAGGAGACTGTGTTCGAAGGCATCGAGCGCGCGCCCGACGCCTTCCTCGGCCTCTTC
AAGGGCGAGAACCTCGGCAAGATGCTGGTCAAGCTCGCTTAA

Upstream 100 bases:

>100_bases
ATTGGGACGCGGGCGGGGCCTAGCACGCCGGGCGCCCTCGACGCCACCCGAGGGGCCGGTTAAACAACTGTTTGAGGCAA
TGAGAACCGGGAGAACGTCC

Downstream 100 bases:

>100_bases
GCCGGACGGACGGCGTAGAACGGCGGCTCCACCCCATCCCTGGAGTCCGCCGTGCCGCGCCTGTTCAGCGCCTATGTGAT
CGTCGACTGGAGCGCCGCCG

Product: alcohol dehydrogenase, zinc-containing

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTAAREIRLKSRPSGVPTHDNFELATVELPDPGPGEVQVKNLWMTVDPYMRGRMNDVKSYVPPFQLGEALQGGAIGEVAV
SNDPSLKPGDLVLSMLGWRERFNAPAGALQKIDPQGLPPQAFLGVAGMPGLTAYAGLLRVAGLKDGDVVFVSGAAGAVGS
LVCQIAKAKGHTVIGSAGGPEKVAFLKEIGVDHAIDYKAEKDLTAALARAAPNGIDVYFDNVGGDHLEAALNAARPFARF
AECGMISMYNSTEPPAGPRNIIQVVGKQIRIQGFIVSSHADMQADFQRDLAGWVREGKVKWKETVFEGIERAPDAFLGLF
KGENLGKMLVKLA

Sequences:

>Translated_333_residues
MTAAREIRLKSRPSGVPTHDNFELATVELPDPGPGEVQVKNLWMTVDPYMRGRMNDVKSYVPPFQLGEALQGGAIGEVAV
SNDPSLKPGDLVLSMLGWRERFNAPAGALQKIDPQGLPPQAFLGVAGMPGLTAYAGLLRVAGLKDGDVVFVSGAAGAVGS
LVCQIAKAKGHTVIGSAGGPEKVAFLKEIGVDHAIDYKAEKDLTAALARAAPNGIDVYFDNVGGDHLEAALNAARPFARF
AECGMISMYNSTEPPAGPRNIIQVVGKQIRIQGFIVSSHADMQADFQRDLAGWVREGKVKWKETVFEGIERAPDAFLGLF
KGENLGKMLVKLA
>Mature_332_residues
TAAREIRLKSRPSGVPTHDNFELATVELPDPGPGEVQVKNLWMTVDPYMRGRMNDVKSYVPPFQLGEALQGGAIGEVAVS
NDPSLKPGDLVLSMLGWRERFNAPAGALQKIDPQGLPPQAFLGVAGMPGLTAYAGLLRVAGLKDGDVVFVSGAAGAVGSL
VCQIAKAKGHTVIGSAGGPEKVAFLKEIGVDHAIDYKAEKDLTAALARAAPNGIDVYFDNVGGDHLEAALNAARPFARFA
ECGMISMYNSTEPPAGPRNIIQVVGKQIRIQGFIVSSHADMQADFQRDLAGWVREGKVKWKETVFEGIERAPDAFLGLFK
GENLGKMLVKLA

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=335, Percent_Identity=40.5970149253731, Blast_Score=245, Evalue=4e-65,
Organism=Homo sapiens, GI226059133, Length=335, Percent_Identity=40.5970149253731, Blast_Score=245, Evalue=4e-65,
Organism=Homo sapiens, GI226056130, Length=302, Percent_Identity=39.0728476821192, Blast_Score=203, Evalue=1e-52,
Organism=Homo sapiens, GI226246682, Length=347, Percent_Identity=36.8876080691643, Blast_Score=195, Evalue=4e-50,
Organism=Homo sapiens, GI226246680, Length=347, Percent_Identity=36.8876080691643, Blast_Score=195, Evalue=4e-50,
Organism=Homo sapiens, GI22748929, Length=347, Percent_Identity=36.8876080691643, Blast_Score=195, Evalue=4e-50,
Organism=Homo sapiens, GI28557745, Length=328, Percent_Identity=30.4878048780488, Blast_Score=99, Evalue=4e-21,
Organism=Escherichia coli, GI226510941, Length=335, Percent_Identity=40.8955223880597, Blast_Score=259, Evalue=1e-70,
Organism=Caenorhabditis elegans, GI133901712, Length=335, Percent_Identity=32.8358208955224, Blast_Score=169, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI133901710, Length=335, Percent_Identity=32.8358208955224, Blast_Score=169, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17507255, Length=174, Percent_Identity=27.5862068965517, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323504, Length=366, Percent_Identity=30.8743169398907, Blast_Score=117, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6319621, Length=205, Percent_Identity=29.7560975609756, Blast_Score=66, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6323961, Length=205, Percent_Identity=30.2439024390244, Blast_Score=66, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6323729, Length=204, Percent_Identity=28.921568627451, Blast_Score=66, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6324486, Length=205, Percent_Identity=31.219512195122, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35416; Mature: 35285

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAREIRLKSRPSGVPTHDNFELATVELPDPGPGEVQVKNLWMTVDPYMRGRMNDVKSY
CCCCHHEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECHHHHCCHHHHHHH
VPPFQLGEALQGGAIGEVAVSNDPSLKPGDLVLSMLGWRERFNAPAGALQKIDPQGLPPQ
CCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHH
AFLGVAGMPGLTAYAGLLRVAGLKDGDVVFVSGAAGAVGSLVCQIAKAKGHTVIGSAGGP
HHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCH
EKVAFLKEIGVDHAIDYKAEKDLTAALARAAPNGIDVYFDNVGGDHLEAALNAARPFARF
HHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
AECGMISMYNSTEPPAGPRNIIQVVGKQIRIQGFIVSSHADMQADFQRDLAGWVREGKVK
HHCCEEEECCCCCCCCCHHHHHHHHCHHEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCH
WKETVFEGIERAPDAFLGLFKGENLGKMLVKLA
HHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure 
TAAREIRLKSRPSGVPTHDNFELATVELPDPGPGEVQVKNLWMTVDPYMRGRMNDVKSY
CCCHHEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECHHHHCCHHHHHHH
VPPFQLGEALQGGAIGEVAVSNDPSLKPGDLVLSMLGWRERFNAPAGALQKIDPQGLPPQ
CCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHH
AFLGVAGMPGLTAYAGLLRVAGLKDGDVVFVSGAAGAVGSLVCQIAKAKGHTVIGSAGGP
HHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCH
EKVAFLKEIGVDHAIDYKAEKDLTAALARAAPNGIDVYFDNVGGDHLEAALNAARPFARF
HHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
AECGMISMYNSTEPPAGPRNIIQVVGKQIRIQGFIVSSHADMQADFQRDLAGWVREGKVK
HHCCEEEECCCCCCCCCHHHHHHHHCHHEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCH
WKETVFEGIERAPDAFLGLFKGENLGKMLVKLA
HHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]