Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197105419

Identifier: 197105419

GI number: 197105419

Start: 2190126

End: 2190965

Strand: Direct

Name: 197105419

Synonym: PHZ_c1956

Alternate gene names: NA

Gene position: 2190126-2190965 (Clockwise)

Preceding gene: 197105412

Following gene: 197105432

Centisome position: 54.8

GC content: 73.1

Gene sequence:

>840_bases
ATGGACCCCGAGCTGAAACCCGTTCTCGAGCGCATCGCCGACGCCCTCGAACGCCTCGCCCCGCCGCCGCGCACGCCGGC
CGCCTTCGACGGCGCGCGGCTGTTCCGCCACGACCCGGAGACGGGCGCCTTCCACCCTGCGCCGGACTATCCCCTCGCCC
TCGACAGCCTCGTCGGGATCGACCGCCAGAAAGGCCGCGTGGTCGAGAACCTGCGGCGCTTCGCCCAGGGCCTGCCGTTC
AACCACGTCCTGCTCTGGGGCGTGCGGGGCACAGGTAAGAGCTCCATCGCCAAGGCGGCGTTCATGGCCGTGGCGACCCA
GACGCCGGACCTGAAGCTGGTGGAGGTGGACCGCGACCAGGTCACCGCCCTGCCCGCGCTGTTCGACGACCTGCGGGTCC
GGCCCGAGCGCTTCGTCGTACTGTGCGACGACCTGTCGTTCGAGGAGGGCGCGGCCGCCGCCAAGGCGCTGAAGTCCGCC
CTGGAAGGCGGGGTGTCCGGCCCGCCGGCCAATGTGCTGTTCACCGCCACCTCGAACCGCCGTCACCTGATGCCGCGCGG
ACACCAGGAGGATCGCGGCCTCGTCGCCGCCCACGAGGACGCCGAGGAGGAGGTCAGCGTCTCGGACCGCTTCGGCCTGT
GGATCGGCTTCCCGCCGATGGACCAGGCGACCTATCTCGCCGCCGTGAGCGGTTACGCCGAGCGCTACGGCCTGCGGACG
GACGACCTCGAGCGCCGGGCCCTGCAGTGGGCCCAGGCCCGCGGCGGCCGCTCGGGCCGGGTCGCCTGGCAGTTCATCCG
CGACCGCGCCGGCGAGCTGGGCAAGCCCCTGCCGCTGTAG

Upstream 100 bases:

>100_bases
GGCGGGGCCGCTTCCTGCGGCCCCGTTCGAAAGTCGGCGGAAGCTATGCGCAGCGCCCCGCTTTTGCAATGGAACCTGGG
GGCGGCTAAGCCTCGCGGCG

Downstream 100 bases:

>100_bases
ACGCCCCTAGCGCGGCAGGACGAGGGCCGGATCGATCGGCCGCGCGCGTTCCTCGGGGGTGGGCGCGTAGCGGACCTCGA
AATGCAGCTGCGGCTCGGAG

Product: predicted ATPase (AAA+ superfamily)

Products: NA

Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MDPELKPVLERIADALERLAPPPRTPAAFDGARLFRHDPETGAFHPAPDYPLALDSLVGIDRQKGRVVENLRRFAQGLPF
NHVLLWGVRGTGKSSIAKAAFMAVATQTPDLKLVEVDRDQVTALPALFDDLRVRPERFVVLCDDLSFEEGAAAAKALKSA
LEGGVSGPPANVLFTATSNRRHLMPRGHQEDRGLVAAHEDAEEEVSVSDRFGLWIGFPPMDQATYLAAVSGYAERYGLRT
DDLERRALQWAQARGGRSGRVAWQFIRDRAGELGKPLPL

Sequences:

>Translated_279_residues
MDPELKPVLERIADALERLAPPPRTPAAFDGARLFRHDPETGAFHPAPDYPLALDSLVGIDRQKGRVVENLRRFAQGLPF
NHVLLWGVRGTGKSSIAKAAFMAVATQTPDLKLVEVDRDQVTALPALFDDLRVRPERFVVLCDDLSFEEGAAAAKALKSA
LEGGVSGPPANVLFTATSNRRHLMPRGHQEDRGLVAAHEDAEEEVSVSDRFGLWIGFPPMDQATYLAAVSGYAERYGLRT
DDLERRALQWAQARGGRSGRVAWQFIRDRAGELGKPLPL
>Mature_279_residues
MDPELKPVLERIADALERLAPPPRTPAAFDGARLFRHDPETGAFHPAPDYPLALDSLVGIDRQKGRVVENLRRFAQGLPF
NHVLLWGVRGTGKSSIAKAAFMAVATQTPDLKLVEVDRDQVTALPALFDDLRVRPERFVVLCDDLSFEEGAAAAKALKSA
LEGGVSGPPANVLFTATSNRRHLMPRGHQEDRGLVAAHEDAEEEVSVSDRFGLWIGFPPMDQATYLAAVSGYAERYGLRT
DDLERRALQWAQARGGRSGRVAWQFIRDRAGELGKPLPL

Specific function: Unknown

COG id: COG2607

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30649; Mature: 30649

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPELKPVLERIADALERLAPPPRTPAAFDGARLFRHDPETGAFHPAPDYPLALDSLVGI
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHCC
DRQKGRVVENLRRFAQGLPFNHVLLWGVRGTGKSSIAKAAFMAVATQTPDLKLVEVDRDQ
CCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCHH
VTALPALFDDLRVRPERFVVLCDDLSFEEGAAAAKALKSALEGGVSGPPANVLFTATSNR
HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
RHLMPRGHQEDRGLVAAHEDAEEEVSVSDRFGLWIGFPPMDQATYLAAVSGYAERYGLRT
CCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCC
DDLERRALQWAQARGGRSGRVAWQFIRDRAGELGKPLPL
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDPELKPVLERIADALERLAPPPRTPAAFDGARLFRHDPETGAFHPAPDYPLALDSLVGI
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHCC
DRQKGRVVENLRRFAQGLPFNHVLLWGVRGTGKSSIAKAAFMAVATQTPDLKLVEVDRDQ
CCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCHH
VTALPALFDDLRVRPERFVVLCDDLSFEEGAAAAKALKSALEGGVSGPPANVLFTATSNR
HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
RHLMPRGHQEDRGLVAAHEDAEEEVSVSDRFGLWIGFPPMDQATYLAAVSGYAERYGLRT
CCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCC
DDLERRALQWAQARGGRSGRVAWQFIRDRAGELGKPLPL
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA