| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105380
Identifier: 197105380
GI number: 197105380
Start: 2147240
End: 2147800
Strand: Reverse
Name: 197105380
Synonym: PHZ_c1917
Alternate gene names: NA
Gene position: 2147800-2147240 (Counterclockwise)
Preceding gene: 197105381
Following gene: 197105379
Centisome position: 53.75
GC content: 76.83
Gene sequence:
>561_bases GTGGGGGAGGGGCCAATGAGGGCCGAGTCTCTCCCGCTGCGGGAGGCCGCGTGGTCCGCGGGCCTCCTCGGCGCGGTGAT CGTCGGGAGTCTCGCGCTCTCCTGCCTGGAGCCGCTCGTCGCGGTGGCGGTGCTGGCGGCGGGCGCGCTGCCGCCGGCGC GCGCCGTCGGGCTCACCCTCGCGGTGTGGCTGGTCGGTCAGGCGGTCGGCTTCGGCCTGCACGATTTCCCGGTGGACCGC ACGACGATCGGCTGGGGGATCGGCCTCGGCCTCGCCGCGGCGGCCTCCACGCTCGCCGCGGCCGCGACGCTGGTCCGCCT GCCGGGCCGTCCCTCCTGGTTCCGCGCAGGCCTGGCCTTCGTCGCCGCCTTCGTGGCCAACCAGCTGGTCGTGCTCGGCG TGCAGCAGGTGGTCGAGGGCGCTTGCGAGATCGTCCCGGGGGTCATCAGCCGGATCGGCCTCCTCAACGCCGCCTGGCTG GCCGTGCTGCTCGCGGCGGACGCCCTGGCCCGGCGGTTCCTCGGGAGCGGGACCGGCTTCGGCGCCCCGAGGCCCGCGTG A
Upstream 100 bases:
>100_bases TTCTGTTCGGCCGCGTCGAGAACCTGTTCGACGAGCGGTTCGAGAATCCCGTGGGCTTCCAGCAGCCGGGGCGCGGCGCC TTCGCCGGCGTCCGGGTGCA
Downstream 100 bases:
>100_bases GCGCACAGCGGATCGTCTCACTGCTGCCCAGCGCCACCGAGATCGTGGCGACGCTGGGCCTGGCCGGCCGTCTGGTGGGG CGCTCCCACCAGTGCGACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MGEGPMRAESLPLREAAWSAGLLGAVIVGSLALSCLEPLVAVAVLAAGALPPARAVGLTLAVWLVGQAVGFGLHDFPVDR TTIGWGIGLGLAAAASTLAAAATLVRLPGRPSWFRAGLAFVAAFVANQLVVLGVQQVVEGACEIVPGVISRIGLLNAAWL AVLLAADALARRFLGSGTGFGAPRPA
Sequences:
>Translated_186_residues MGEGPMRAESLPLREAAWSAGLLGAVIVGSLALSCLEPLVAVAVLAAGALPPARAVGLTLAVWLVGQAVGFGLHDFPVDR TTIGWGIGLGLAAAASTLAAAATLVRLPGRPSWFRAGLAFVAAFVANQLVVLGVQQVVEGACEIVPGVISRIGLLNAAWL AVLLAADALARRFLGSGTGFGAPRPA >Mature_185_residues GEGPMRAESLPLREAAWSAGLLGAVIVGSLALSCLEPLVAVAVLAAGALPPARAVGLTLAVWLVGQAVGFGLHDFPVDRT TIGWGIGLGLAAAASTLAAAATLVRLPGRPSWFRAGLAFVAAFVANQLVVLGVQQVVEGACEIVPGVISRIGLLNAAWLA VLLAADALARRFLGSGTGFGAPRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18648; Mature: 18517
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEGPMRAESLPLREAAWSAGLLGAVIVGSLALSCLEPLVAVAVLAAGALPPARAVGLTL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AVWLVGQAVGFGLHDFPVDRTTIGWGIGLGLAAAASTLAAAATLVRLPGRPSWFRAGLAF HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VAAFVANQLVVLGVQQVVEGACEIVPGVISRIGLLNAAWLAVLLAADALARRFLGSGTGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GAPRPA CCCCCC >Mature Secondary Structure GEGPMRAESLPLREAAWSAGLLGAVIVGSLALSCLEPLVAVAVLAAGALPPARAVGLTL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AVWLVGQAVGFGLHDFPVDRTTIGWGIGLGLAAAASTLAAAATLVRLPGRPSWFRAGLAF HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VAAFVANQLVVLGVQQVVEGACEIVPGVISRIGLLNAAWLAVLLAADALARRFLGSGTGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GAPRPA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA