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The map label for this gene is prtB [H]

Identifier: 197105378

GI number: 197105378

Start: 2144234

End: 2146222

Strand: Reverse

Name: prtB [H]

Synonym: PHZ_c1915

Alternate gene names: 197105378

Gene position: 2146222-2144234 (Counterclockwise)

Preceding gene: 197105379

Following gene: 197105376

Centisome position: 53.71

GC content: 72.25

Gene sequence:

>1989_bases
GTGAGCGTTGGCGTATCCGTGCCCCAAAGCGGCGATCCGATCGTCGATGGGCTCCTGTTCGGTTCCAAGTGGTCCGGGAC
CAGCCTTACCTTCAGCTTTCCGGCGAGCGTCGCCGACCTTGCGGACTACGCCACCCCGCTCGACCCGACCTACTTCGGCG
TGCTCGAGGCCGCCGGCCAAACCGCGGTGCGGGCGGCGCTGGCCCGCTGGGCGGCGGTCGCGGCCGTCACCTTCACCGAG
GTCGCGCCGTCGGCCGCCGCCGATCTGCGGATCTACCACTACGACGACGGCACGCTGTTCACCGCCCGGGTGGTCGCCTT
CCCCGACGCGACGCCCGAGGCCGGCGACCTGCAGTTCGGCTCGATGTTCGTGGGCCCCGACTGGAGCCCCGGCAATTACC
ACTACTTCACGGTCGTCCATGAGATCGGCCACGCGCTCGGGCTGAAGCACCCGCACGATACGCCGAACGGCTTCCCGGCC
GCGGACTCGGCGGTGGACGCCGTGGCCGAGACGATCATGAGCTACCGGAGCTACGTCGGCGGCCCGATGGGCGGCTATTC
GCTCCAGGCGGGGAGCTATCCCGTCGGGCCGATGCCGAGCGACATCGCCGCGATCCAGCATCTCTACGGCCCCAACTGGG
CCACCAACGCCGGCGACACCACCTACACCTTCGACCCGAGCGCCTCGGTGATCTTCCAGGCGGTCTGGGACGGCGGCGGG
ACCGACACCTACAACTTCGCCAGCTACGCGGCCGATCTTCACATCGATCTTCGCGCCGGCGAGTGGAGCGACCTTGGCGG
CCAGTACGCGGTGCTCGACACGGGCGATGCGAGCATCCGGCCCTCGGGGAACGTCGCCAATCCTCACCTCTACCAGGGCG
ATCTCCGCTCGCTGATCGAGAACGCGGTCGGCGGGTCGGGCGACGACACCCTGACCGGCAACCAGGCCGCCAATACCCTG
ACCGGCGGGGCGGGCGACGATTCCCTCGTCGGCGGCGACGGGGCCGACACCCTGGTCGGCGGGTCCGGGAACGACACCCT
GTCCGGAGGGGCGGGGAGCGACCGCTTCACCCTGGGCGGCGGCGGCGACGTCATCGCCGACTTCCTGGCGGGCGACCGGA
TCGTGGCGCAGGGCGCCGTGGCCGGCGATCTGACCTTCGATCTGACCGGCGAGATCCTCACCATCGACCCCGACGGCGCG
GGCGCGGCGGCCTCGTTCACCGTCACCGTGACCGGCGGCCTCCTGTCCGGCTACGAGCTGGTCGCCGAAGCGGACGGGGG
CCTCGTCTGGAAGGCGCTGCCGCCGCCGCCCGAGCCGCCGCCGCCCGGACCGACGCACACCGACCAGCCGGGCGAGGGCT
CGGACTTCGTCGTGCTGTCGCAGGAGGGGACGACCTTCGCGGGGGCGGGCGCGGACTGGGTCCTGGGCTCCATCGAGGGG
GACTGGGTCCACGGCAACCAGGGCGACGACTATCTGCACGGCTACGGCGCGGCCGACACCGTCTACGGCGGCCAGGGCGA
CGACCGCGTGTTCGGCGACGAGGGCGACGACGCCATCTACGGCGACATGGGATCCGATCGCCTCGACGGGGGGACCGGCG
ACGACGTCGCCCACGGCGGCCCGGGCGACGACGTCGTCGAGGGCGGGCAGGGCGCGGACCTGCTCTACGGCGGCAAGGAC
GCCGACACCGTCAGCGGCGGGGCCGGCGACGACTGGATCTGGGGCGATCTCGGCGACGACAGGCTGTCGGGCGGAGCTGG
CGCCGACCGCTTCGCCTTCGTCGCGGGCTACGCCGGGAACGACGTCATCGCCGACTTCTCCGCCGCCGACGGCGATCGGA
TCGAGCTGCGCGGGGTCGAGGACTTCGCCGCCCTGACCATCGGCTCCAGCGCGGCGGGCGCCACCATCCTGCTGCCGACG
GGCGAGGTGATCACGCTCCTCGGCGTGCCGGGCGCCAGCCTCGGCGCCTCGGACTTCCTGTTCGGTTGA

Upstream 100 bases:

>100_bases
TGATCCGGCGTCCCGGAGGCCAGCTAGGCCGTTGACCCGCGGCGGCGGCGCGGACCATGTTCCGCGCCCCAGGTGACCGG
TAAGCGTTGGAGTGGCGTTC

Downstream 100 bases:

>100_bases
GGCGAGCGCCTCAGCCGACCGGCTCGGGCGTCCGTGCCTTGGTCCCCGCGTAGACGAACGCGCTGTCGTCCAGGTCGATC
AGCGGCAGCTCCTCCTTCTC

Product: hemolysin-type calcium-binding region protein

Products: NA

Alternate protein names: ProB [H]

Number of amino acids: Translated: 662; Mature: 661

Protein sequence:

>662_residues
MSVGVSVPQSGDPIVDGLLFGSKWSGTSLTFSFPASVADLADYATPLDPTYFGVLEAAGQTAVRAALARWAAVAAVTFTE
VAPSAAADLRIYHYDDGTLFTARVVAFPDATPEAGDLQFGSMFVGPDWSPGNYHYFTVVHEIGHALGLKHPHDTPNGFPA
ADSAVDAVAETIMSYRSYVGGPMGGYSLQAGSYPVGPMPSDIAAIQHLYGPNWATNAGDTTYTFDPSASVIFQAVWDGGG
TDTYNFASYAADLHIDLRAGEWSDLGGQYAVLDTGDASIRPSGNVANPHLYQGDLRSLIENAVGGSGDDTLTGNQAANTL
TGGAGDDSLVGGDGADTLVGGSGNDTLSGGAGSDRFTLGGGGDVIADFLAGDRIVAQGAVAGDLTFDLTGEILTIDPDGA
GAAASFTVTVTGGLLSGYELVAEADGGLVWKALPPPPEPPPPGPTHTDQPGEGSDFVVLSQEGTTFAGAGADWVLGSIEG
DWVHGNQGDDYLHGYGAADTVYGGQGDDRVFGDEGDDAIYGDMGSDRLDGGTGDDVAHGGPGDDVVEGGQGADLLYGGKD
ADTVSGGAGDDWIWGDLGDDRLSGGAGADRFAFVAGYAGNDVIADFSAADGDRIELRGVEDFAALTIGSSAAGATILLPT
GEVITLLGVPGASLGASDFLFG

Sequences:

>Translated_662_residues
MSVGVSVPQSGDPIVDGLLFGSKWSGTSLTFSFPASVADLADYATPLDPTYFGVLEAAGQTAVRAALARWAAVAAVTFTE
VAPSAAADLRIYHYDDGTLFTARVVAFPDATPEAGDLQFGSMFVGPDWSPGNYHYFTVVHEIGHALGLKHPHDTPNGFPA
ADSAVDAVAETIMSYRSYVGGPMGGYSLQAGSYPVGPMPSDIAAIQHLYGPNWATNAGDTTYTFDPSASVIFQAVWDGGG
TDTYNFASYAADLHIDLRAGEWSDLGGQYAVLDTGDASIRPSGNVANPHLYQGDLRSLIENAVGGSGDDTLTGNQAANTL
TGGAGDDSLVGGDGADTLVGGSGNDTLSGGAGSDRFTLGGGGDVIADFLAGDRIVAQGAVAGDLTFDLTGEILTIDPDGA
GAAASFTVTVTGGLLSGYELVAEADGGLVWKALPPPPEPPPPGPTHTDQPGEGSDFVVLSQEGTTFAGAGADWVLGSIEG
DWVHGNQGDDYLHGYGAADTVYGGQGDDRVFGDEGDDAIYGDMGSDRLDGGTGDDVAHGGPGDDVVEGGQGADLLYGGKD
ADTVSGGAGDDWIWGDLGDDRLSGGAGADRFAFVAGYAGNDVIADFSAADGDRIELRGVEDFAALTIGSSAAGATILLPT
GEVITLLGVPGASLGASDFLFG
>Mature_661_residues
SVGVSVPQSGDPIVDGLLFGSKWSGTSLTFSFPASVADLADYATPLDPTYFGVLEAAGQTAVRAALARWAAVAAVTFTEV
APSAAADLRIYHYDDGTLFTARVVAFPDATPEAGDLQFGSMFVGPDWSPGNYHYFTVVHEIGHALGLKHPHDTPNGFPAA
DSAVDAVAETIMSYRSYVGGPMGGYSLQAGSYPVGPMPSDIAAIQHLYGPNWATNAGDTTYTFDPSASVIFQAVWDGGGT
DTYNFASYAADLHIDLRAGEWSDLGGQYAVLDTGDASIRPSGNVANPHLYQGDLRSLIENAVGGSGDDTLTGNQAANTLT
GGAGDDSLVGGDGADTLVGGSGNDTLSGGAGSDRFTLGGGGDVIADFLAGDRIVAQGAVAGDLTFDLTGEILTIDPDGAG
AAASFTVTVTGGLLSGYELVAEADGGLVWKALPPPPEPPPPGPTHTDQPGEGSDFVVLSQEGTTFAGAGADWVLGSIEGD
WVHGNQGDDYLHGYGAADTVYGGQGDDRVFGDEGDDAIYGDMGSDRLDGGTGDDVAHGGPGDDVVEGGQGADLLYGGKDA
DTVSGGAGDDWIWGDLGDDRLSGGAGADRFAFVAGYAGNDVIADFSAADGDRIELRGVEDFAALTIGSSAAGATILLPTG
EVITLLGVPGASLGASDFLFG

Specific function: Unknown

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 hemolysin-type calcium-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018511
- InterPro:   IPR001343
- InterPro:   IPR001818
- InterPro:   IPR016294
- InterPro:   IPR013858
- InterPro:   IPR006026
- InterPro:   IPR011049 [H]

Pfam domain/function: PF00353 HemolysinCabind; PF00413 Peptidase_M10; PF08548 Peptidase_M10_C [H]

EC number: NA

Molecular weight: Translated: 66934; Mature: 66803

Theoretical pI: Translated: 3.68; Mature: 3.68

Prosite motif: PS00142 ZINC_PROTEASE ; PS00330 HEMOLYSIN_CALCIUM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVGVSVPQSGDPIVDGLLFGSKWSGTSLTFSFPASVADLADYATPLDPTYFGVLEAAGQ
CCCCCCCCCCCCCCEEHEEECCCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHCCH
TAVRAALARWAAVAAVTFTEVAPSAAADLRIYHYDDGTLFTARVVAFPDATPEAGDLQFG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEEC
SMFVGPDWSPGNYHYFTVVHEIGHALGLKHPHDTPNGFPAADSAVDAVAETIMSYRSYVG
CEEECCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GPMGGYSLQAGSYPVGPMPSDIAAIQHLYGPNWATNAGDTTYTFDPSASVIFQAVWDGGG
CCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEECCCC
TDTYNFASYAADLHIDLRAGEWSDLGGQYAVLDTGDASIRPSGNVANPHLYQGDLRSLIE
CCCCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHH
NAVGGSGDDTLTGNQAANTLTGGAGDDSLVGGDGADTLVGGSGNDTLSGGAGSDRFTLGG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEECCCCCCCCCCCCCCCEEEECC
GGDVIADFLAGDRIVAQGAVAGDLTFDLTGEILTIDPDGAGAAASFTVTVTGGLLSGYEL
CHHHHHHHHCCCEEEECCCEECCEEEEECCCEEEECCCCCCCEEEEEEEEECCCCCCEEE
VAEADGGLVWKALPPPPEPPPPGPTHTDQPGEGSDFVVLSQEGTTFAGAGADWVLGSIEG
EEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEECCCC
DWVHGNQGDDYLHGYGAADTVYGGQGDDRVFGDEGDDAIYGDMGSDRLDGGTGDDVAHGG
CEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
PGDDVVEGGQGADLLYGGKDADTVSGGAGDDWIWGDLGDDRLSGGAGADRFAFVAGYAGN
CCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCC
DVIADFSAADGDRIELRGVEDFAALTIGSSAAGATILLPTGEVITLLGVPGASLGASDFL
CEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCCCCC
FG
CC
>Mature Secondary Structure 
SVGVSVPQSGDPIVDGLLFGSKWSGTSLTFSFPASVADLADYATPLDPTYFGVLEAAGQ
CCCCCCCCCCCCCEEHEEECCCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHCCH
TAVRAALARWAAVAAVTFTEVAPSAAADLRIYHYDDGTLFTARVVAFPDATPEAGDLQFG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEEC
SMFVGPDWSPGNYHYFTVVHEIGHALGLKHPHDTPNGFPAADSAVDAVAETIMSYRSYVG
CEEECCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GPMGGYSLQAGSYPVGPMPSDIAAIQHLYGPNWATNAGDTTYTFDPSASVIFQAVWDGGG
CCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEECCCC
TDTYNFASYAADLHIDLRAGEWSDLGGQYAVLDTGDASIRPSGNVANPHLYQGDLRSLIE
CCCCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHH
NAVGGSGDDTLTGNQAANTLTGGAGDDSLVGGDGADTLVGGSGNDTLSGGAGSDRFTLGG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEECCCCCCCCCCCCCCCEEEECC
GGDVIADFLAGDRIVAQGAVAGDLTFDLTGEILTIDPDGAGAAASFTVTVTGGLLSGYEL
CHHHHHHHHCCCEEEECCCEECCEEEEECCCEEEECCCCCCCEEEEEEEEECCCCCCEEE
VAEADGGLVWKALPPPPEPPPPGPTHTDQPGEGSDFVVLSQEGTTFAGAGADWVLGSIEG
EEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEECCCC
DWVHGNQGDDYLHGYGAADTVYGGQGDDRVFGDEGDDAIYGDMGSDRLDGGTGDDVAHGG
CEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
PGDDVVEGGQGADLLYGGKDADTVSGGAGDDWIWGDLGDDRLSGGAGADRFAFVAGYAGN
CCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCC
DVIADFSAADGDRIELRGVEDFAALTIGSSAAGATILLPTGEVITLLGVPGASLGASDFL
CEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCCCCC
FG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2722818 [H]