Click here to switch to the map view.

The map label for this gene is 197105375

Identifier: 197105375

GI number: 197105375

Start: 2141488

End: 2142066

Strand: Reverse

Name: 197105375

Synonym: PHZ_c1912

Alternate gene names: NA

Gene position: 2142066-2141488 (Counterclockwise)

Preceding gene: 197105376

Following gene: 197105374

Centisome position: 53.6

GC content: 75.65

Gene sequence:

>579_bases
GTGCCGGCCAAGACGTCCTACCATCACGGAGACCTCGCGCGGGCGGCCCTCGACGCCGCCTTCGAGCTGGTCCGCGCCGG
CGGCGCCGAGGCGGTGTCGATGCGCGAGGTCGCGGCGAAGGTCGGGGTGGCGCACCGCGCGCTCTACCGCCCCTTCGGCG
GCCGCGAAGGCCTGCTGAACGCCGTGGCGGCGCGCGGCTACGAGATCCTGGCCGACCGGCTGGAGGCGGCGATCGGGGAG
GGGGGCGAGGTCCGGCGGGGCTTCGTCGCCGCCTACGCGCGCTTCGCCCTGGAGGAGCCCGGCCTCTACGGTCTCGTGAT
GGACCGGGACCGCAAGCAGATCGCCGCCACGCCCGCGCTCAAGGCCGCGTCCGACCGGGTGATCGCCCTCAGCCTGCAGG
CCCTGGCCGGCGGCGCGCGCGGGGCCGAGGGACGCGACCGCGTCATCGCGATCTGGTCCCTGCTGCACGGCGCGGTCGCG
CTCTACCGCTCGGGCCTGATCCGGGCCTCCGGGACCGAGCCGCTGGTGGACTACCTCGTGGCGCTGAGCGAGGGCGCGCC
CTTTTCGGCTGGAAAGTGA

Upstream 100 bases:

>100_bases
GGTGGCCTTCGACGTCGCCGTCGACATCCAGGACGCCGAGGGCCAGTCCGTCGCCGGCATGACGGTTGCCTGGCACGTGC
GGCGCACCTAAGCCGGGCGG

Downstream 100 bases:

>100_bases
TCGGCGTTCAGATATCTTCCGCCGCAAATCTCAAAGGGTGGGAATCCAGATGGCTGTCGAACACTTCGACGTGGTGATCG
TGGGCGCGGGCCTGTCCGGC

Product: transcriptional regulator,TetR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcriptional Regulatory Protein; Regulatory Protein Tetr; TetR-Family Transcriptional Regulator; TetR-Family Protein Transcriptional Regulator

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MPAKTSYHHGDLARAALDAAFELVRAGGAEAVSMREVAAKVGVAHRALYRPFGGREGLLNAVAARGYEILADRLEAAIGE
GGEVRRGFVAAYARFALEEPGLYGLVMDRDRKQIAATPALKAASDRVIALSLQALAGGARGAEGRDRVIAIWSLLHGAVA
LYRSGLIRASGTEPLVDYLVALSEGAPFSAGK

Sequences:

>Translated_192_residues
MPAKTSYHHGDLARAALDAAFELVRAGGAEAVSMREVAAKVGVAHRALYRPFGGREGLLNAVAARGYEILADRLEAAIGE
GGEVRRGFVAAYARFALEEPGLYGLVMDRDRKQIAATPALKAASDRVIALSLQALAGGARGAEGRDRVIAIWSLLHGAVA
LYRSGLIRASGTEPLVDYLVALSEGAPFSAGK
>Mature_191_residues
PAKTSYHHGDLARAALDAAFELVRAGGAEAVSMREVAAKVGVAHRALYRPFGGREGLLNAVAARGYEILADRLEAAIGEG
GEVRRGFVAAYARFALEEPGLYGLVMDRDRKQIAATPALKAASDRVIALSLQALAGGARGAEGRDRVIAIWSLLHGAVAL
YRSGLIRASGTEPLVDYLVALSEGAPFSAGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20097; Mature: 19966

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAKTSYHHGDLARAALDAAFELVRAGGAEAVSMREVAAKVGVAHRALYRPFGGREGLLN
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AVAARGYEILADRLEAAIGEGGEVRRGFVAAYARFALEEPGLYGLVMDRDRKQIAATPAL
HHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHH
KAASDRVIALSLQALAGGARGAEGRDRVIAIWSLLHGAVALYRSGLIRASGTEPLVDYLV
HHCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ALSEGAPFSAGK
HHCCCCCCCCCC
>Mature Secondary Structure 
PAKTSYHHGDLARAALDAAFELVRAGGAEAVSMREVAAKVGVAHRALYRPFGGREGLLN
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AVAARGYEILADRLEAAIGEGGEVRRGFVAAYARFALEEPGLYGLVMDRDRKQIAATPAL
HHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHH
KAASDRVIALSLQALAGGARGAEGRDRVIAIWSLLHGAVALYRSGLIRASGTEPLVDYLV
HHCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ALSEGAPFSAGK
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA