| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197105350
Identifier: 197105350
GI number: 197105350
Start: 2112856
End: 2114682
Strand: Reverse
Name: 197105350
Synonym: PHZ_c1887
Alternate gene names: NA
Gene position: 2114682-2112856 (Counterclockwise)
Preceding gene: 197105351
Following gene: 197105346
Centisome position: 52.92
GC content: 69.95
Gene sequence:
>1827_bases ATGTTCCGCACCGCCTGTTCCGCCCTGGCGCTCGCCGCCGTCCTCGCCGCTGCGCCGGCCTACGCCCAGCAGCCGGCCGC CGCGCCGGCCGCCGCCGCCAACCAGTCCGAGGACGCGCGGCTCGCCGCCTTCTTCCAGGACGCCTGGATGGAGAGCGCCC GGCTCAGCCCCGAGACGCTCAGCCAGCTGGGCCTGAAGGAGCGCTACGGCGAGCTCGGCGACTACACCAAGGCCGGGCAG GACAAGGCCCTGGCGGTGTCCGAGGCCCAGCTCGCGCGCATGAAGCGCGAGTTCGACCGCGCCAAGCTCAGCCCGGCCTC GCAGGTCTCCTACGACCTCTTCGAGAAGTCGGTCGCCAACCAGCGCATGTTCGACAGGTGGTACTGGCAGAACTACGCCG TCAGCTCGACGGGGAGCGCCCTCGACGGCGTGCCCGTGATGCTGATCAACGTCCACCGGGTGGACACCGTGGCCGACGCC GAGGCCTACGTCTCGCGCCTGAAGGCCATGGACCGCGTGGCCCGCGAGGTCGCCGCCGACATCGACGCGCGCACCGCCAA GGGCTTCCTGCCGCCCGCCTTCGTCTTCGGCCGGGTGATCCCCGACGCCCAGAACCAGACGAAGGGCGCCCCGTTCGACG CCGGCCCCGACCACGCCGTCTGGGCCGACTTCAAGAAGAAGGTCGCCGCGCTCAAGGCCGACGAGGCGACCAAGGCCCGC CTGCTGAAGGATGGCGAGGCCGCGCTGAAGGGCGAGTGGCGCAGCGGCTACGCCCGCTATGTCGCGGCGCTGGAGCGGAT GAAGGCCAAGGCCGACGCCGTGAACGGCGTCTGGGCGCTGCCGGACGGCGAGGCCTTCTACGCCGACATGGTGCGCTTCT TCACGACCACCGACCTGACCCCCGACCAGATCCACCAGATCGGGCTCTCGGAGGTCGCTCGGATTCGCGGCGAGATGGAG GCCATCCAGCGCCAGGTCGGCTTCAAGGGCTCGCTGAACGACTTCTTCGCCCACGTGAAGACGGACGCGAAGTTCCGCTA CCCCAACACCGACGCCGGCAAGCAGCAGTATCTCGCCGACGCCAAGAAGATCATCGCCGACTACATGGCGACCGCGGCGG ACAAGCAGTTCTCGGTGCTGCCGAAGGGCGCCCTCGAGGTCCGCGCGGTCGAGCCGTTCCGCGAGAAGACCGCCTCGGTG GCCTTCTACAACACCGGCACCCCCGACGGCTCGCGCCCGGGCATCTTCTACGTGAACCTGTCCGACATGACCCAGGTGCT GAAGCCGCAGCTGGAGGCGATCGCCTACCACGAGGGCGCGCCGGGCCATCACTTCCAGATCGCCCGCTCCCTGGAGCAGA CGGACCTGCCGATGTTCCGCCGCTACGCCTACCAGGGCGCCTACCAGGAGGGCTGGGGGCTCTACGCCGAGAAGCTGGGC AAGGAGGCGGGCTTCTACCAGGACCCCTACGCCGACTTCGGCCGCCTCTCGCTCGAGATCTGGCGCGCCGCCCGCCTCGT GCTGGACACCGGCGTCCACGCCAAGAAGTGGTCGCGCGACCAGGCCGTGCAGTACATGCGCGACAACACCCTGAACTCCG AGCGCGACATCCAGAGCGAGATCGACCGCTACTTCACCAACCCCGGCCAGGCGACCAGCTACAAGCTGGGCCAGCTGCGC ATCTCCGAGCTGCGCCGCAAGGCCGAGACGGCGCTGGGCGACAAGTTCGACGTCCGCGCCTTCCACGAGGTGGTGCTGGC GGCGGGCGCCATCCCGCTCGACGTCCTGGAGCAGCGCGTCGACGCCTACATCGCCGGGGCGAAGTAG
Upstream 100 bases:
>100_bases GGTCTGGCGCTACCGCTACTGGGAATAGCGCCTTTCCAAGATTTCATTTGGGCCGGGCAGGGGCGCCCCCTATCCCTCGG TCAAACCTTGGGGGTTCTCC
Downstream 100 bases:
>100_bases GCGCCCGCCCGGCGCGGCCCGGCGGCTACTTCGCCAGGTCGCGCAGCAGCGAGTCCCAGTGCGCCAGCGAGCCGTCGATG GCGGCCACCGGGGCCTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MFRTACSALALAAVLAAAPAYAQQPAAAPAAAANQSEDARLAAFFQDAWMESARLSPETLSQLGLKERYGELGDYTKAGQ DKALAVSEAQLARMKREFDRAKLSPASQVSYDLFEKSVANQRMFDRWYWQNYAVSSTGSALDGVPVMLINVHRVDTVADA EAYVSRLKAMDRVAREVAADIDARTAKGFLPPAFVFGRVIPDAQNQTKGAPFDAGPDHAVWADFKKKVAALKADEATKAR LLKDGEAALKGEWRSGYARYVAALERMKAKADAVNGVWALPDGEAFYADMVRFFTTTDLTPDQIHQIGLSEVARIRGEME AIQRQVGFKGSLNDFFAHVKTDAKFRYPNTDAGKQQYLADAKKIIADYMATAADKQFSVLPKGALEVRAVEPFREKTASV AFYNTGTPDGSRPGIFYVNLSDMTQVLKPQLEAIAYHEGAPGHHFQIARSLEQTDLPMFRRYAYQGAYQEGWGLYAEKLG KEAGFYQDPYADFGRLSLEIWRAARLVLDTGVHAKKWSRDQAVQYMRDNTLNSERDIQSEIDRYFTNPGQATSYKLGQLR ISELRRKAETALGDKFDVRAFHEVVLAAGAIPLDVLEQRVDAYIAGAK
Sequences:
>Translated_608_residues MFRTACSALALAAVLAAAPAYAQQPAAAPAAAANQSEDARLAAFFQDAWMESARLSPETLSQLGLKERYGELGDYTKAGQ DKALAVSEAQLARMKREFDRAKLSPASQVSYDLFEKSVANQRMFDRWYWQNYAVSSTGSALDGVPVMLINVHRVDTVADA EAYVSRLKAMDRVAREVAADIDARTAKGFLPPAFVFGRVIPDAQNQTKGAPFDAGPDHAVWADFKKKVAALKADEATKAR LLKDGEAALKGEWRSGYARYVAALERMKAKADAVNGVWALPDGEAFYADMVRFFTTTDLTPDQIHQIGLSEVARIRGEME AIQRQVGFKGSLNDFFAHVKTDAKFRYPNTDAGKQQYLADAKKIIADYMATAADKQFSVLPKGALEVRAVEPFREKTASV AFYNTGTPDGSRPGIFYVNLSDMTQVLKPQLEAIAYHEGAPGHHFQIARSLEQTDLPMFRRYAYQGAYQEGWGLYAEKLG KEAGFYQDPYADFGRLSLEIWRAARLVLDTGVHAKKWSRDQAVQYMRDNTLNSERDIQSEIDRYFTNPGQATSYKLGQLR ISELRRKAETALGDKFDVRAFHEVVLAAGAIPLDVLEQRVDAYIAGAK >Mature_608_residues MFRTACSALALAAVLAAAPAYAQQPAAAPAAAANQSEDARLAAFFQDAWMESARLSPETLSQLGLKERYGELGDYTKAGQ DKALAVSEAQLARMKREFDRAKLSPASQVSYDLFEKSVANQRMFDRWYWQNYAVSSTGSALDGVPVMLINVHRVDTVADA EAYVSRLKAMDRVAREVAADIDARTAKGFLPPAFVFGRVIPDAQNQTKGAPFDAGPDHAVWADFKKKVAALKADEATKAR LLKDGEAALKGEWRSGYARYVAALERMKAKADAVNGVWALPDGEAFYADMVRFFTTTDLTPDQIHQIGLSEVARIRGEME AIQRQVGFKGSLNDFFAHVKTDAKFRYPNTDAGKQQYLADAKKIIADYMATAADKQFSVLPKGALEVRAVEPFREKTASV AFYNTGTPDGSRPGIFYVNLSDMTQVLKPQLEAIAYHEGAPGHHFQIARSLEQTDLPMFRRYAYQGAYQEGWGLYAEKLG KEAGFYQDPYADFGRLSLEIWRAARLVLDTGVHAKKWSRDQAVQYMRDNTLNSERDIQSEIDRYFTNPGQATSYKLGQLR ISELRRKAETALGDKFDVRAFHEVVLAAGAIPLDVLEQRVDAYIAGAK
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67339; Mature: 67339
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRTACSALALAAVLAAAPAYAQQPAAAPAAAANQSEDARLAAFFQDAWMESARLSPETL CCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH SQLGLKERYGELGDYTKAGQDKALAVSEAQLARMKREFDRAKLSPASQVSYDLFEKSVAN HHHCHHHHHHHHCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QRMFDRWYWQNYAVSSTGSALDGVPVMLINVHRVDTVADAEAYVSRLKAMDRVAREVAAD HHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDARTAKGFLPPAFVFGRVIPDAQNQTKGAPFDAGPDHAVWADFKKKVAALKADEATKAR CCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH LLKDGEAALKGEWRSGYARYVAALERMKAKADAVNGVWALPDGEAFYADMVRFFTTTDLT HHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCC PDQIHQIGLSEVARIRGEMEAIQRQVGFKGSLNDFFAHVKTDAKFRYPNTDAGKQQYLAD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHH AKKIIADYMATAADKQFSVLPKGALEVRAVEPFREKTASVAFYNTGTPDGSRPGIFYVNL HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHCEEEEEECCCCCCCCCCEEEEEH SDMTQVLKPQLEAIAYHEGAPGHHFQIARSLEQTDLPMFRRYAYQGAYQEGWGLYAEKLG HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHC KEAGFYQDPYADFGRLSLEIWRAARLVLDTGVHAKKWSRDQAVQYMRDNTLNSERDIQSE HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHH IDRYFTNPGQATSYKLGQLRISELRRKAETALGDKFDVRAFHEVVLAAGAIPLDVLEQRV HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHH DAYIAGAK HHHHCCCC >Mature Secondary Structure MFRTACSALALAAVLAAAPAYAQQPAAAPAAAANQSEDARLAAFFQDAWMESARLSPETL CCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH SQLGLKERYGELGDYTKAGQDKALAVSEAQLARMKREFDRAKLSPASQVSYDLFEKSVAN HHHCHHHHHHHHCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QRMFDRWYWQNYAVSSTGSALDGVPVMLINVHRVDTVADAEAYVSRLKAMDRVAREVAAD HHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDARTAKGFLPPAFVFGRVIPDAQNQTKGAPFDAGPDHAVWADFKKKVAALKADEATKAR CCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH LLKDGEAALKGEWRSGYARYVAALERMKAKADAVNGVWALPDGEAFYADMVRFFTTTDLT HHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCC PDQIHQIGLSEVARIRGEMEAIQRQVGFKGSLNDFFAHVKTDAKFRYPNTDAGKQQYLAD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHH AKKIIADYMATAADKQFSVLPKGALEVRAVEPFREKTASVAFYNTGTPDGSRPGIFYVNL HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHCEEEEEECCCCCCCCCCEEEEEH SDMTQVLKPQLEAIAYHEGAPGHHFQIARSLEQTDLPMFRRYAYQGAYQEGWGLYAEKLG HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHC KEAGFYQDPYADFGRLSLEIWRAARLVLDTGVHAKKWSRDQAVQYMRDNTLNSERDIQSE HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHH IDRYFTNPGQATSYKLGQLRISELRRKAETALGDKFDVRAFHEVVLAAGAIPLDVLEQRV HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHH DAYIAGAK HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA